RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
DDX39A-207ENST00000588542 LINC00313P59037 77 aa10.72□□□□□ -0.69
DDX39A-207ENST00000588542 NOTCH2NLQ7Z3S9 236 aa10.72□□□□□ -0.69
DDX39A-207ENST00000588542 A8MUU9 505 aa10.71□□□□□ -0.69
DDX39A-207ENST00000588542 KRTAP16-1A8MUX0 517 aa10.7□□□□□ -0.7
DDX39A-207ENST00000588542 IGHV6-1A0A0B4J1U7 121 aa10.69□□□□□ -0.7
DDX39A-207ENST00000588542 J3KT08 172 aa10.69□□□□□ -0.7
DDX39A-207ENST00000588542 A0A1B0GVX0 72 aa10.68□□□□□ -0.7
DDX39A-207ENST00000588542 ATP11AUNQ6ZP68 121 aa10.65□□□□□ -0.7
DDX39A-207ENST00000588542 GTF2H5Q6ZYL4 71 aa10.65□□□□□ -0.7
DDX39A-207ENST00000588542 NREPQ16612 68 aa10.64□□□□□ -0.71
DDX39A-207ENST00000588542 C8orf87E5RJ46 101 aa10.62□□□□□ -0.71
DDX39A-207ENST00000588542 LCE2AQ5TA79 106 aaPredicted RBP10.62□□□□□ -0.71
DDX39A-207ENST00000588542 KRTAP19-2Q3LHN2 52 aa10.6□□□□□ -0.71
DDX39A-207ENST00000588542 A8MWP4 228 aa10.59□□□□□ -0.71
DDX39A-207ENST00000588542 IGKV3D-7A0A0C4DH55 119 aa10.58□□□□□ -0.72
DDX39A-207ENST00000588542 NDUFB1O75438 58 aa10.58□□□□□ -0.72
DDX39A-207ENST00000588542 F8W1H4 67 aa10.56□□□□□ -0.72
DDX39A-207ENST00000588542 LCE2CQ5TA81 110 aa10.56□□□□□ -0.72
DDX39A-207ENST00000588542 C8orf17Q9NRJ1 99 aa10.53□□□□□ -0.72
DDX39A-207ENST00000588542 PRR15Q8IV56 129 aa10.52□□□□□ -0.73
DDX39A-207ENST00000588542 Q6ZVQ6 151 aa10.51□□□□□ -0.73
DDX39A-207ENST00000588542 ETDBQ3ZM63 59 aa10.49□□□□□ -0.73
DDX39A-207ENST00000588542 LINC00846Q9NV44 126 aa10.47□□□□□ -0.73
DDX39A-207ENST00000588542 K7EQZ3 153 aa10.46□□□□□ -0.73
DDX39A-207ENST00000588542 BPY2O14599 106 aa10.46□□□□□ -0.73
DDX39A-207ENST00000588542 Q8N9P0 234 aaPredicted RBP10.46□□□□□ -0.73
DDX39A-207ENST00000588542 MMP24-AS1A0A0U1RRL7 71 aa10.44□□□□□ -0.74
DDX39A-207ENST00000588542 UBL5Q9BZL1 73 aa10.4□□□□□ -0.74
DDX39A-207ENST00000588542 ZCCHC13Q8WW36 166 aaKnown RBP10.39□□□□□ -0.75
DDX39A-207ENST00000588542 FLGP20930 4061 aaPredicted RBP10.38□□□□□ -0.75
DDX39A-207ENST00000588542 MT1HP80294 61 aa10.38□□□□□ -0.75
DDX39A-207ENST00000588542 Q8N9L7 120 aa10.38□□□□□ -0.75
DDX39A-207ENST00000588542 TMEM254Q8TBM7 123 aa10.37□□□□□ -0.75
DDX39A-207ENST00000588542 MRPL34Q9BQ48 92 aaKnown RBP10.36□□□□□ -0.75
DDX39A-207ENST00000588542 hDV103S1A0JD37 113 aa10.35□□□□□ -0.75
DDX39A-207ENST00000588542 A0A1B0GV90 55 aa10.34□□□□□ -0.75
DDX39A-207ENST00000588542 COX6B2Q6YFQ2 88 aa10.34□□□□□ -0.75
DDX39A-207ENST00000588542 HRES1P13985 223 aa10.28□□□□□ -0.76
DDX39A-207ENST00000588542 WFDC13Q8IUB5 93 aa10.27□□□□□ -0.77
DDX39A-207ENST00000588542 MPLKIPQ8TAP9 179 aa10.26□□□□□ -0.77
DDX39A-207ENST00000588542 CASC2Q6XLA1 102 aa10.25□□□□□ -0.77
DDX39A-207ENST00000588542 NDUFS5O43920 106 aa10.23□□□□□ -0.77
DDX39A-207ENST00000588542 SPINK7P58062 85 aa10.23□□□□□ -0.77
DDX39A-207ENST00000588542 CXCL6P80162 114 aa10.22□□□□□ -0.77
DDX39A-207ENST00000588542 ACYP1P07311 99 aa10.21□□□□□ -0.77
DDX39A-207ENST00000588542 FAM240AA0A1B0GVK7 77 aa10.2□□□□□ -0.78
DDX39A-207ENST00000588542 HCG22E2RYF7 251 aa10.19□□□□□ -0.78
DDX39A-207ENST00000588542 Q5W150 140 aa10.16□□□□□ -0.78
DDX39A-207ENST00000588542 RBM12B-AS1Q9P1G2 102 aa10.16□□□□□ -0.78
DDX39A-207ENST00000588542 M0R2T5 61 aa10.15□□□□□ -0.78
DDX39A-207ENST00000588542 KRTAP10-6P60371 365 aaPredicted RBP10.13□□□□□ -0.79
DDX39A-207ENST00000588542 FAM236DA0A1B0GTK5 79 aa10.12□□□□□ -0.79
DDX39A-207ENST00000588542 FAM236CP0DP71 79 aa10.12□□□□□ -0.79
DDX39A-207ENST00000588542 LORP23490 312 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-207ENST00000588542 ATP5EP2Q5VTU8 51 aa10.05□□□□□ -0.8
DDX39A-207ENST00000588542 KRTAP9-2Q9BYQ4 174 aa10.05□□□□□ -0.8
DDX39A-207ENST00000588542 IGKV2D-30A0A075B6S6 120 aa10.02□□□□□ -0.81
DDX39A-207ENST00000588542 IGKV2-30P06310 120 aa10.02□□□□□ -0.81
DDX39A-207ENST00000588542 C7orf65Q6ZTY9 151 aa10.01□□□□□ -0.81
DDX39A-207ENST00000588542 LINC00643Q86TS7 51 aa9.99□□□□□ -0.81
DDX39A-207ENST00000588542 TP53AIP1Q9HCN2 124 aa9.97□□□□□ -0.81
DDX39A-207ENST00000588542 HIST1H4AP62805 103 aaKnown RBP9.95□□□□□ -0.82
DDX39A-207ENST00000588542 LCE2DQ5TA82 110 aaPredicted RBP9.94□□□□□ -0.82
DDX39A-207ENST00000588542 J3QR89 54 aa9.91□□□□□ -0.82
DDX39A-207ENST00000588542 A0A087WVE0 104 aa9.89□□□□□ -0.83
DDX39A-207ENST00000588542 KRTAP9-8Q9BYQ0 159 aa9.89□□□□□ -0.83
DDX39A-207ENST00000588542 C4orf26Q17RF5 130 aa9.84□□□□□ -0.83
DDX39A-207ENST00000588542 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
DDX39A-207ENST00000588542 TRAV22A0A0B4J277 110 aa9.8□□□□□ -0.84
DDX39A-207ENST00000588542 MT2AP02795 61 aa9.77□□□□□ -0.85
DDX39A-207ENST00000588542 UQCRQO14949 82 aa9.76□□□□□ -0.85
DDX39A-207ENST00000588542 CYP4F30PQ9H0H9 118 aa9.75□□□□□ -0.85
DDX39A-207ENST00000588542 KRTAP3-1Q9BYR8 98 aa9.74□□□□□ -0.85
DDX39A-207ENST00000588542 KRTAP9-6A0A140TA67 174 aa9.72□□□□□ -0.85
DDX39A-207ENST00000588542 LOC101927531A0A1B0GV80 90 aa9.71□□□□□ -0.86
DDX39A-207ENST00000588542 H0Y9P7 68 aa9.7□□□□□ -0.86
DDX39A-207ENST00000588542 K7ERU9 68 aa9.69□□□□□ -0.86
DDX39A-207ENST00000588542 MT1FP04733 61 aa9.69□□□□□ -0.86
DDX39A-207ENST00000588542 C1orf64Q8NEQ6 169 aa9.68□□□□□ -0.86
DDX39A-207ENST00000588542 OCR1Q9BZK8 76 aa9.68□□□□□ -0.86
DDX39A-207ENST00000588542 ATOX1O00244 68 aa9.66□□□□□ -0.86
DDX39A-207ENST00000588542 KRTAP10-10P60014 251 aa9.62□□□□□ -0.87
DDX39A-207ENST00000588542 MT-ATP8P03928 68 aa9.61□□□□□ -0.87
DDX39A-207ENST00000588542 IMUPQ9GZP8 106 aa9.59□□□□□ -0.87
DDX39A-207ENST00000588542 FSIP2Q5CZC0 6907 aa9.58□□□□□ -0.88
DDX39A-207ENST00000588542 LINC00208Q96KT6 92 aa9.57□□□□□ -0.88
DDX39A-207ENST00000588542 KRTAP9-3Q9BYQ3 159 aa9.57□□□□□ -0.88
DDX39A-207ENST00000588542 S4R3F8 94 aa9.56□□□□□ -0.88
DDX39A-207ENST00000588542 CRCT1Q9UGL9 99 aa9.54□□□□□ -0.88
DDX39A-207ENST00000588542 SCGB1A1P11684 91 aa9.53□□□□□ -0.88
DDX39A-207ENST00000588542 MP68P56378 58 aa9.53□□□□□ -0.88
DDX39A-207ENST00000588542 C5orf47Q569G3 176 aa9.53□□□□□ -0.88
DDX39A-207ENST00000588542 KLKP1Q107X0 134 aa9.52□□□□□ -0.89
DDX39A-207ENST00000588542 LCA10Q71F78 164 aa9.52□□□□□ -0.89
DDX39A-207ENST00000588542 USH2AO75445 5202 aa9.49□□□□□ -0.89
DDX39A-207ENST00000588542 H3BPC8 53 aa9.46□□□□□ -0.9
DDX39A-207ENST00000588542 LCE2BO14633 110 aa9.46□□□□□ -0.9
DDX39A-207ENST00000588542 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
DDX39A-207ENST00000588542 FAM236AA0A1B0GUQ0 79 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms