RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 TRBV7-4A0A0J9YYF1 115 aa6.59□□□□□ -1.35
CLPTM1-208ENST00000588274 H0YGX0 51 aa6.59□□□□□ -1.35
CLPTM1-208ENST00000588274 BATFQ16520 125 aa6.59□□□□□ -1.35
CLPTM1-208ENST00000588274 HIGD1BQ9P298 99 aa6.59□□□□□ -1.35
CLPTM1-208ENST00000588274 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.36
CLPTM1-208ENST00000588274 A0A0B4J2C4 111 aa6.58□□□□□ -1.36
CLPTM1-208ENST00000588274 DEFB116Q30KQ4 102 aa6.58□□□□□ -1.36
CLPTM1-208ENST00000588274 HSD52Q0P140 79 aa6.57□□□□□ -1.36
CLPTM1-208ENST00000588274 IGHV6-1A0A0B4J1U7 121 aa6.56□□□□□ -1.36
CLPTM1-208ENST00000588274 A0A1B0GX51 115 aa6.56□□□□□ -1.36
CLPTM1-208ENST00000588274 FABP2P12104 132 aa6.56□□□□□ -1.36
CLPTM1-208ENST00000588274 Q8N9P0 234 aaPredicted RBP6.56□□□□□ -1.36
CLPTM1-208ENST00000588274 A8MWP4 228 aa6.55□□□□□ -1.36
CLPTM1-208ENST00000588274 SPINK7P58062 85 aa6.54□□□□□ -1.36
CLPTM1-208ENST00000588274 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
CLPTM1-208ENST00000588274 RAB37Q96AX2 223 aa6.53□□□□□ -1.36
CLPTM1-208ENST00000588274 J3QR89 54 aa6.52□□□□□ -1.37
CLPTM1-208ENST00000588274 FXYD2P54710 66 aa6.52□□□□□ -1.37
CLPTM1-208ENST00000588274 GTF2H5Q6ZYL4 71 aa6.52□□□□□ -1.37
CLPTM1-208ENST00000588274 CEND1Q8N111 149 aa6.52□□□□□ -1.37
CLPTM1-208ENST00000588274 A0A1B0GVX0 72 aa6.51□□□□□ -1.37
CLPTM1-208ENST00000588274 SNCGO76070 127 aa6.51□□□□□ -1.37
CLPTM1-208ENST00000588274 ANKRD29Q8N6D5 301 aa6.51□□□□□ -1.37
CLPTM1-208ENST00000588274 TRIAP1O43715 76 aa6.5□□□□□ -1.37
CLPTM1-208ENST00000588274 C8orf87E5RJ46 101 aa6.49□□□□□ -1.37
CLPTM1-208ENST00000588274 GHRHP01286 108 aa6.48□□□□□ -1.37
CLPTM1-208ENST00000588274 CCKP06307 115 aa6.48□□□□□ -1.37
CLPTM1-208ENST00000588274 C5orf47Q569G3 176 aa6.47□□□□□ -1.37
CLPTM1-208ENST00000588274 WFDC13Q8IUB5 93 aa6.47□□□□□ -1.37
CLPTM1-208ENST00000588274 K7ERJ3 54 aa6.46□□□□□ -1.38
CLPTM1-208ENST00000588274 PRO1854Q9UHT4 67 aa6.46□□□□□ -1.38
CLPTM1-208ENST00000588274 TRACP01848 142 aa6.45□□□□□ -1.38
CLPTM1-208ENST00000588274 ORMDL1Q9P0S3 153 aa6.44□□□□□ -1.38
CLPTM1-208ENST00000588274 TAX1BP3O14907 124 aa6.42□□□□□ -1.38
CLPTM1-208ENST00000588274 NAA38Q9BRA0 125 aaKnown RBP6.41□□□□□ -1.38
CLPTM1-208ENST00000588274 TMEM256-PLSCR3K7ERE1 68 aa6.39□□□□□ -1.39
CLPTM1-208ENST00000588274 DNAL4O96015 105 aa6.39□□□□□ -1.39
CLPTM1-208ENST00000588274 C9orf118A6NHY6 69 aa6.38□□□□□ -1.39
CLPTM1-208ENST00000588274 H3BQ85 93 aa6.38□□□□□ -1.39
CLPTM1-208ENST00000588274 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
CLPTM1-208ENST00000588274 KMT2DO14686 5537 aa6.35□□□□□ -1.39
CLPTM1-208ENST00000588274 J3KT08 172 aa6.35□□□□□ -1.39
CLPTM1-208ENST00000588274 K7EP34 96 aa6.35□□□□□ -1.39
CLPTM1-208ENST00000588274 MT1BP07438 61 aa6.34□□□□□ -1.39
CLPTM1-208ENST00000588274 C8orf17Q9NRJ1 99 aa6.34□□□□□ -1.39
CLPTM1-208ENST00000588274 A0A1W2PPM0 123 aa6.33□□□□□ -1.4
CLPTM1-208ENST00000588274 PSMB2P49721 201 aa6.33□□□□□ -1.4
CLPTM1-208ENST00000588274 KRTAP20-1Q3LI63 56 aa6.33□□□□□ -1.4
CLPTM1-208ENST00000588274 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
CLPTM1-208ENST00000588274 Q6ZQT0 140 aa6.33□□□□□ -1.4
CLPTM1-208ENST00000588274 IGKV3D-7A0A0C4DH55 119 aa6.31□□□□□ -1.4
CLPTM1-208ENST00000588274 F8W1H4 67 aa6.3□□□□□ -1.4
CLPTM1-208ENST00000588274 KRTAP5-9P26371 169 aa6.3□□□□□ -1.4
CLPTM1-208ENST00000588274 RBM3P98179 157 aaKnown RBP6.3□□□□□ -1.4
CLPTM1-208ENST00000588274 LYRM7Q5U5X0 104 aa6.3□□□□□ -1.4
CLPTM1-208ENST00000588274 ANAPC13Q9BS18 74 aa6.3□□□□□ -1.4
CLPTM1-208ENST00000588274 SPCS1Q9Y6A9 102 aa6.3□□□□□ -1.4
CLPTM1-208ENST00000588274 SCGB1C2P0DMR2 95 aa6.29□□□□□ -1.4
CLPTM1-208ENST00000588274 A6NN06 94 aa6.28□□□□□ -1.4
CLPTM1-208ENST00000588274 COX6CP09669 75 aa6.27□□□□□ -1.41
CLPTM1-208ENST00000588274 Q6ZVQ6 151 aa6.27□□□□□ -1.41
CLPTM1-208ENST00000588274 DSCR8Q96T75 97 aa6.27□□□□□ -1.41
CLPTM1-208ENST00000588274 SMIM20Q8N5G0 67 aa6.26□□□□□ -1.41
CLPTM1-208ENST00000588274 NDUFB1O75438 58 aa6.25□□□□□ -1.41
CLPTM1-208ENST00000588274 MMP24-AS1A0A0U1RRL7 71 aa6.24□□□□□ -1.41
CLPTM1-208ENST00000588274 C9JAW5 83 aa6.24□□□□□ -1.41
CLPTM1-208ENST00000588274 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
CLPTM1-208ENST00000588274 ATXN8Q156A1 80 aa6.23□□□□□ -1.41
CLPTM1-208ENST00000588274 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
CLPTM1-208ENST00000588274 PRR15Q8IV56 129 aa6.22□□□□□ -1.41
CLPTM1-208ENST00000588274 SPRR2GQ9BYE4 73 aa6.21□□□□□ -1.42
CLPTM1-208ENST00000588274 TMEM254Q8TBM7 123 aa6.2□□□□□ -1.42
CLPTM1-208ENST00000588274 MRPL34Q9BQ48 92 aaKnown RBP6.2□□□□□ -1.42
CLPTM1-208ENST00000588274 LOC110117498A0A087WWA1 95 aa6.18□□□□□ -1.42
CLPTM1-208ENST00000588274 BAALC-AS2P0C853 105 aa6.18□□□□□ -1.42
CLPTM1-208ENST00000588274 Q5VV11 94 aa6.18□□□□□ -1.42
CLPTM1-208ENST00000588274 SEC61GP60059 68 aa6.17□□□□□ -1.42
CLPTM1-208ENST00000588274 Q5W150 140 aa6.17□□□□□ -1.42
CLPTM1-208ENST00000588274 A0A1B0GW54 56 aa6.16□□□□□ -1.42
CLPTM1-208ENST00000588274 PRO0461Q9UI25 63 aa6.16□□□□□ -1.42
CLPTM1-208ENST00000588274 SMCPP49901 116 aaPredicted RBP6.15□□□□□ -1.42
CLPTM1-208ENST00000588274 IGKV2D-30A0A075B6S6 120 aa6.14□□□□□ -1.43
CLPTM1-208ENST00000588274 IGKV2-30P06310 120 aa6.14□□□□□ -1.43
CLPTM1-208ENST00000588274 C7orf65Q6ZTY9 151 aa6.14□□□□□ -1.43
CLPTM1-208ENST00000588274 K7EQZ3 153 aa6.13□□□□□ -1.43
CLPTM1-208ENST00000588274 H3BT86 120 aa6.12□□□□□ -1.43
CLPTM1-208ENST00000588274 RPS28P62857 69 aaKnown RBP6.12□□□□□ -1.43
CLPTM1-208ENST00000588274 hDV103S1A0JD37 113 aa6.11□□□□□ -1.43
CLPTM1-208ENST00000588274 C4orf26Q17RF5 130 aa6.11□□□□□ -1.43
CLPTM1-208ENST00000588274 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
CLPTM1-208ENST00000588274 JMJD7-PLA2G4BH0Y9G9 81 aa6.1□□□□□ -1.43
CLPTM1-208ENST00000588274 C14orf132Q9NPU4 83 aa6.1□□□□□ -1.43
CLPTM1-208ENST00000588274 ETDBQ3ZM63 59 aa6.09□□□□□ -1.43
CLPTM1-208ENST00000588274 FAM236AA0A1B0GUQ0 79 aa6.08□□□□□ -1.44
CLPTM1-208ENST00000588274 FAM236BA0A1B0GV22 79 aa6.08□□□□□ -1.44
CLPTM1-208ENST00000588274 MT-ATP8P03928 68 aa6.08□□□□□ -1.44
CLPTM1-208ENST00000588274 NDUFS5O43920 106 aa6.07□□□□□ -1.44
CLPTM1-208ENST00000588274 PDE6GP18545 87 aa6.07□□□□□ -1.44
CLPTM1-208ENST00000588274 KRTAP2-3P0C7H8 128 aa6.06□□□□□ -1.44
CLPTM1-208ENST00000588274 NREPQ16612 68 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms