RNA–Protein interactions for RNA: ENST00000587881.1

NEDD4L-220, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-220ENST00000587881 FRAS1Q86XX4 4008 aa8.5□□□□□ -1.05
NEDD4L-220ENST00000587881 Q8N9P0 234 aaPredicted RBP8.5□□□□□ -1.05
NEDD4L-220ENST00000587881 DNAH8Q96JB1 4490 aa8.48□□□□□ -1.05
NEDD4L-220ENST00000587881 A8MUN3 132 aa8.48□□□□□ -1.05
NEDD4L-220ENST00000587881 CD164Q04900 197 aa8.48□□□□□ -1.05
NEDD4L-220ENST00000587881 COA5Q86WW8 74 aa8.48□□□□□ -1.05
NEDD4L-220ENST00000587881 DNAH2Q9P225 4427 aa8.48□□□□□ -1.05
NEDD4L-220ENST00000587881 A0A087X002 238 aa8.47□□□□□ -1.05
NEDD4L-220ENST00000587881 NOTCH2NLQ7Z3S9 236 aa8.47□□□□□ -1.05
NEDD4L-220ENST00000587881 SSBP3-AS1Q7Z2R9 100 aa8.46□□□□□ -1.05
NEDD4L-220ENST00000587881 CIRBP-AS1Q8TBR5 109 aa8.45□□□□□ -1.06
NEDD4L-220ENST00000587881 Q5VV11 94 aa8.44□□□□□ -1.06
NEDD4L-220ENST00000587881 FBN3Q75N90 2809 aa8.44□□□□□ -1.06
NEDD4L-220ENST00000587881 TGP01266 2768 aa8.44□□□□□ -1.06
NEDD4L-220ENST00000587881 SPINK6Q6UWN8 80 aa8.44□□□□□ -1.06
NEDD4L-220ENST00000587881 MEGF8Q7Z7M0 2845 aa8.43□□□□□ -1.06
NEDD4L-220ENST00000587881 LOC101927531A0A1B0GV80 90 aa8.42□□□□□ -1.06
NEDD4L-220ENST00000587881 LY6G6CO95867 125 aa8.42□□□□□ -1.06
NEDD4L-220ENST00000587881 DNAH6Q9C0G6 4158 aa8.4□□□□□ -1.06
NEDD4L-220ENST00000587881 C8orf87E5RJ46 101 aa8.4□□□□□ -1.06
NEDD4L-220ENST00000587881 PRR15LQ9BU68 103 aa8.4□□□□□ -1.06
NEDD4L-220ENST00000587881 CHKB-CPT1BH3BT56 60 aa8.38□□□□□ -1.07
NEDD4L-220ENST00000587881 ALMS1Q8TCU4 4167 aa8.37□□□□□ -1.07
NEDD4L-220ENST00000587881 KRTAP13-3Q3SY46 172 aa8.37□□□□□ -1.07
NEDD4L-220ENST00000587881 Q5W150 140 aa8.36□□□□□ -1.07
NEDD4L-220ENST00000587881 Q75L30 129 aa8.35□□□□□ -1.07
NEDD4L-220ENST00000587881 HRES1P13985 223 aa8.35□□□□□ -1.07
NEDD4L-220ENST00000587881 KRTAP10-2P60368 255 aa8.35□□□□□ -1.07
NEDD4L-220ENST00000587881 LINC01558Q9Y6Z2 57 aa8.33□□□□□ -1.08
NEDD4L-220ENST00000587881 LINC00313P59037 77 aa8.33□□□□□ -1.08
NEDD4L-220ENST00000587881 SPAG11AQ6PDA7 123 aa8.3□□□□□ -1.08
NEDD4L-220ENST00000587881 DNAH11Q96DT5 4516 aa8.3□□□□□ -1.08
NEDD4L-220ENST00000587881 DNAH5Q8TE73 4624 aa8.3□□□□□ -1.08
NEDD4L-220ENST00000587881 KRTAP13-2Q52LG2 175 aa8.3□□□□□ -1.08
NEDD4L-220ENST00000587881 Q6ZSA8 131 aa8.3□□□□□ -1.08
NEDD4L-220ENST00000587881 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
NEDD4L-220ENST00000587881 A6NED7 52 aa8.26□□□□□ -1.09
NEDD4L-220ENST00000587881 ACYP2P14621 99 aa8.26□□□□□ -1.09
NEDD4L-220ENST00000587881 KRTAP10-1P60331 282 aa8.26□□□□□ -1.09
NEDD4L-220ENST00000587881 A8MU10 97 aa8.24□□□□□ -1.09
NEDD4L-220ENST00000587881 PMAIP1Q13794 54 aa8.22□□□□□ -1.09
NEDD4L-220ENST00000587881 LCA10Q71F78 164 aa8.22□□□□□ -1.09
NEDD4L-220ENST00000587881 PKD1P98161 4303 aa8.21□□□□□ -1.09
NEDD4L-220ENST00000587881 KRTAP1-4P0C5Y4 121 aa8.2□□□□□ -1.1
NEDD4L-220ENST00000587881 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
NEDD4L-220ENST00000587881 DMAC1Q96GE9 116 aa8.2□□□□□ -1.1
NEDD4L-220ENST00000587881 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
NEDD4L-220ENST00000587881 IGKV2-30P06310 120 aa8.19□□□□□ -1.1
NEDD4L-220ENST00000587881 PRR26Q8N8Z3 221 aa8.19□□□□□ -1.1
NEDD4L-220ENST00000587881 KRTAP16-1A8MUX0 517 aa8.19□□□□□ -1.1
NEDD4L-220ENST00000587881 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
NEDD4L-220ENST00000587881 SPTSSBQ8NFR3 76 aa8.15□□□□□ -1.1
NEDD4L-220ENST00000587881 DNHD1Q96M86 4753 aa8.15□□□□□ -1.1
NEDD4L-220ENST00000587881 PLA2G1BP04054 148 aaKnown RBP8.14□□□□□ -1.11
NEDD4L-220ENST00000587881 LRP1BQ9NZR2 4599 aa8.13□□□□□ -1.11
NEDD4L-220ENST00000587881 VPS13BQ7Z7G8 4022 aa8.13□□□□□ -1.11
NEDD4L-220ENST00000587881 SPINK1P00995 79 aa8.12□□□□□ -1.11
NEDD4L-220ENST00000587881 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
NEDD4L-220ENST00000587881 SPINK7P58062 85 aa8.11□□□□□ -1.11
NEDD4L-220ENST00000587881 FAT2Q9NYQ8 4349 aa8.11□□□□□ -1.11
NEDD4L-220ENST00000587881 HYDINQ4G0P3 5121 aa8.1□□□□□ -1.11
NEDD4L-220ENST00000587881 IGKV2D-30A0A075B6S6 120 aa8.06□□□□□ -1.12
NEDD4L-220ENST00000587881 A6NN06 94 aa8.04□□□□□ -1.12
NEDD4L-220ENST00000587881 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
NEDD4L-220ENST00000587881 KTN1-AS1Q86SY8 53 aa8.02□□□□□ -1.12
NEDD4L-220ENST00000587881 A0A1B0GU69 56 aa8.01□□□□□ -1.13
NEDD4L-220ENST00000587881 LINC00304Q8N9R0 145 aa8.01□□□□□ -1.13
NEDD4L-220ENST00000587881 C7orf65Q6ZTY9 151 aa7.99□□□□□ -1.13
NEDD4L-220ENST00000587881 SEC61GP60059 68 aa7.99□□□□□ -1.13
NEDD4L-220ENST00000587881 SACSQ9NZJ4 4579 aa7.92□□□□□ -1.14
NEDD4L-220ENST00000587881 SPATA8Q6RVD6 105 aa7.91□□□□□ -1.14
NEDD4L-220ENST00000587881 KRTAP21-3Q3LHN1 58 aa7.9□□□□□ -1.15
NEDD4L-220ENST00000587881 UQCR11O14957 56 aa7.89□□□□□ -1.15
NEDD4L-220ENST00000587881 SMR3BP02814 79 aaPredicted RBP7.88□□□□□ -1.15
NEDD4L-220ENST00000587881 PKHD1P08F94 4074 aa7.88□□□□□ -1.15
NEDD4L-220ENST00000587881 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
NEDD4L-220ENST00000587881 Q8N1X5 172 aa7.85□□□□□ -1.15
NEDD4L-220ENST00000587881 A8MUU9 505 aa7.84□□□□□ -1.15
NEDD4L-220ENST00000587881 C20orf166-AS1Q96NR2 134 aa7.84□□□□□ -1.15
NEDD4L-220ENST00000587881 A0A1B0GVY2 172 aa7.8□□□□□ -1.16
NEDD4L-220ENST00000587881 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
NEDD4L-220ENST00000587881 RBM12B-AS1Q9P1G2 102 aa7.8□□□□□ -1.16
NEDD4L-220ENST00000587881 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
NEDD4L-220ENST00000587881 PKHD1L1Q86WI1 4243 aa7.79□□□□□ -1.16
NEDD4L-220ENST00000587881 DYNC1H1Q14204 4646 aaKnown RBP7.79□□□□□ -1.16
NEDD4L-220ENST00000587881 LCE2BO14633 110 aa7.79□□□□□ -1.16
NEDD4L-220ENST00000587881 APOBP04114 4563 aaKnown RBP7.76□□□□□ -1.17
NEDD4L-220ENST00000587881 KRTAP3-1Q9BYR8 98 aa7.7□□□□□ -1.18
NEDD4L-220ENST00000587881 FAT1Q14517 4588 aa7.66□□□□□ -1.18
NEDD4L-220ENST00000587881 PRAC1Q96KF2 57 aa7.62□□□□□ -1.19
NEDD4L-220ENST00000587881 FLG2Q5D862 2391 aaPredicted RBP7.62□□□□□ -1.19
NEDD4L-220ENST00000587881 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
NEDD4L-220ENST00000587881 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
NEDD4L-220ENST00000587881 A0A1B0GU33 70 aa7.59□□□□□ -1.2
NEDD4L-220ENST00000587881 RYR2Q92736 4967 aa7.57□□□□□ -1.2
NEDD4L-220ENST00000587881 H0YAA0 97 aa7.57□□□□□ -1.2
NEDD4L-220ENST00000587881 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
NEDD4L-220ENST00000587881 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
NEDD4L-220ENST00000587881 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
NEDD4L-220ENST00000587881 TNXBP22105 4242 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms