RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 PCOTHQ58A44 107 aa11.08□□□□□ -0.64
DDX39A-206ENST00000587730 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
DDX39A-206ENST00000587730 KMT2CQ8NEZ4 4911 aaKnown RBP11.03□□□□□ -0.64
DDX39A-206ENST00000587730 SRRM2Q9UQ35 2752 aaKnown RBP11.03□□□□□ -0.64
DDX39A-206ENST00000587730 TENM2Q9NT68 2774 aa11.03□□□□□ -0.64
DDX39A-206ENST00000587730 C8orf87E5RJ46 101 aa11.02□□□□□ -0.64
DDX39A-206ENST00000587730 LINC01558Q9Y6Z2 57 aa11.02□□□□□ -0.64
DDX39A-206ENST00000587730 PMAIP1Q13794 54 aa11.02□□□□□ -0.65
DDX39A-206ENST00000587730 SSBP3-AS1Q7Z2R9 100 aa11.01□□□□□ -0.65
DDX39A-206ENST00000587730 IGLV7-43P04211 117 aa11□□□□□ -0.65
DDX39A-206ENST00000587730 C1orf134Q5TEV5 83 aa10.96□□□□□ -0.65
DDX39A-206ENST00000587730 ATP11AUNQ6ZP68 121 aa10.95□□□□□ -0.66
DDX39A-206ENST00000587730 A6NED7 52 aa10.95□□□□□ -0.66
DDX39A-206ENST00000587730 HRES1P13985 223 aa10.95□□□□□ -0.66
DDX39A-206ENST00000587730 ANAPC11Q9NYG5 84 aa10.95□□□□□ -0.66
DDX39A-206ENST00000587730 VPS13DQ5THJ4 4388 aa10.93□□□□□ -0.66
DDX39A-206ENST00000587730 A0A087X002 238 aa10.92□□□□□ -0.66
DDX39A-206ENST00000587730 KRTAP13-3Q3SY46 172 aa10.92□□□□□ -0.66
DDX39A-206ENST00000587730 NOTCH2NLQ7Z3S9 236 aa10.92□□□□□ -0.66
DDX39A-206ENST00000587730 RYR3Q15413 4870 aa10.91□□□□□ -0.66
DDX39A-206ENST00000587730 CIRBP-AS1Q8TBR5 109 aa10.91□□□□□ -0.66
DDX39A-206ENST00000587730 CDC42SE1Q9NRR8 79 aa10.91□□□□□ -0.66
DDX39A-206ENST00000587730 SPINK6Q6UWN8 80 aa10.9□□□□□ -0.66
DDX39A-206ENST00000587730 SPAG11AQ6PDA7 123 aa10.89□□□□□ -0.67
DDX39A-206ENST00000587730 ACYP2P14621 99 aa10.88□□□□□ -0.67
DDX39A-206ENST00000587730 FAM229AH3BQW9 127 aa10.86□□□□□ -0.67
DDX39A-206ENST00000587730 KMT2AQ03164 3969 aa10.85□□□□□ -0.67
DDX39A-206ENST00000587730 LCA10Q71F78 164 aa10.84□□□□□ -0.67
DDX39A-206ENST00000587730 Q5W150 140 aa10.84□□□□□ -0.67
DDX39A-206ENST00000587730 LINC00313P59037 77 aa10.82□□□□□ -0.68
DDX39A-206ENST00000587730 ALMS1Q8TCU4 4167 aa10.8□□□□□ -0.68
DDX39A-206ENST00000587730 DNAH17Q9UFH2 4485 aa10.79□□□□□ -0.68
DDX39A-206ENST00000587730 HYDINQ4G0P3 5121 aa10.79□□□□□ -0.68
DDX39A-206ENST00000587730 SPTSSBQ8NFR3 76 aa10.79□□□□□ -0.68
DDX39A-206ENST00000587730 DMAC1Q96GE9 116 aa10.79□□□□□ -0.68
DDX39A-206ENST00000587730 A8MU10 97 aa10.78□□□□□ -0.68
DDX39A-206ENST00000587730 SACSQ9NZJ4 4579 aa10.77□□□□□ -0.69
DDX39A-206ENST00000587730 KTN1-AS1Q86SY8 53 aa10.77□□□□□ -0.69
DDX39A-206ENST00000587730 DNAH8Q96JB1 4490 aa10.75□□□□□ -0.69
DDX39A-206ENST00000587730 HECTD4Q9Y4D8 3996 aa10.73□□□□□ -0.69
DDX39A-206ENST00000587730 LY6G6CO95867 125 aa10.72□□□□□ -0.69
DDX39A-206ENST00000587730 IGKV2-30P06310 120 aa10.72□□□□□ -0.69
DDX39A-206ENST00000587730 A6NN06 94 aa10.7□□□□□ -0.7
DDX39A-206ENST00000587730 DNAH6Q9C0G6 4158 aa10.7□□□□□ -0.7
DDX39A-206ENST00000587730 PRR26Q8N8Z3 221 aa10.69□□□□□ -0.7
DDX39A-206ENST00000587730 Q6ZSA8 131 aa10.68□□□□□ -0.7
DDX39A-206ENST00000587730 DNAH2Q9P225 4427 aa10.67□□□□□ -0.7
DDX39A-206ENST00000587730 SPINK7P58062 85 aa10.67□□□□□ -0.7
DDX39A-206ENST00000587730 RYR2Q92736 4967 aa10.66□□□□□ -0.7
DDX39A-206ENST00000587730 H3BS24 57 aa10.66□□□□□ -0.7
DDX39A-206ENST00000587730 KRTAP13-2Q52LG2 175 aa10.65□□□□□ -0.7
DDX39A-206ENST00000587730 KRTAP16-1A8MUX0 517 aa10.63□□□□□ -0.71
DDX39A-206ENST00000587730 KRTAP10-2P60368 255 aa10.63□□□□□ -0.71
DDX39A-206ENST00000587730 FRAS1Q86XX4 4008 aa10.6□□□□□ -0.71
DDX39A-206ENST00000587730 C7orf65Q6ZTY9 151 aa10.58□□□□□ -0.72
DDX39A-206ENST00000587730 A0A1B0GU69 56 aa10.58□□□□□ -0.72
DDX39A-206ENST00000587730 SPINK1P00995 79 aa10.55□□□□□ -0.72
DDX39A-206ENST00000587730 EPPK1P58107 5090 aaKnown RBP10.55□□□□□ -0.72
DDX39A-206ENST00000587730 KRTAP1-4P0C5Y4 121 aa10.54□□□□□ -0.72
DDX39A-206ENST00000587730 KRTAP10-1P60331 282 aa10.54□□□□□ -0.72
DDX39A-206ENST00000587730 RETNLBQ9BQ08 111 aa10.51□□□□□ -0.73
DDX39A-206ENST00000587730 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
DDX39A-206ENST00000587730 FAT2Q9NYQ8 4349 aa10.49□□□□□ -0.73
DDX39A-206ENST00000587730 IGKV2D-30A0A075B6S6 120 aa10.49□□□□□ -0.73
DDX39A-206ENST00000587730 TYMSOSQ8TAI1 123 aa10.48□□□□□ -0.73
DDX39A-206ENST00000587730 BIRC6Q9NR09 4857 aa10.48□□□□□ -0.73
DDX39A-206ENST00000587730 SPATA8Q6RVD6 105 aa10.47□□□□□ -0.73
DDX39A-206ENST00000587730 PLA2G1BP04054 148 aaKnown RBP10.46□□□□□ -0.74
DDX39A-206ENST00000587730 UQCR11O14957 56 aa10.44□□□□□ -0.74
DDX39A-206ENST00000587730 DNAH11Q96DT5 4516 aa10.43□□□□□ -0.74
DDX39A-206ENST00000587730 RBM12B-AS1Q9P1G2 102 aa10.43□□□□□ -0.74
DDX39A-206ENST00000587730 PKD1P98161 4303 aa10.38□□□□□ -0.75
DDX39A-206ENST00000587730 MIR22HGQ0VDD5 57 aa10.38□□□□□ -0.75
DDX39A-206ENST00000587730 DNAH5Q8TE73 4624 aa10.37□□□□□ -0.75
DDX39A-206ENST00000587730 A0A0A0MQY5 61 aa10.36□□□□□ -0.75
DDX39A-206ENST00000587730 LINC00304Q8N9R0 145 aa10.35□□□□□ -0.75
DDX39A-206ENST00000587730 PKHD1P08F94 4074 aa10.32□□□□□ -0.76
DDX39A-206ENST00000587730 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
DDX39A-206ENST00000587730 A0A1B0GVY2 172 aa10.2□□□□□ -0.78
DDX39A-206ENST00000587730 C20orf166-AS1Q96NR2 134 aa10.2□□□□□ -0.78
DDX39A-206ENST00000587730 A8MUU9 505 aa10.19□□□□□ -0.78
DDX39A-206ENST00000587730 DYNC1H1Q14204 4646 aaKnown RBP10.18□□□□□ -0.78
DDX39A-206ENST00000587730 KRTAP17-1Q9BYP8 105 aa10.17□□□□□ -0.78
DDX39A-206ENST00000587730 Q8N1X5 172 aa10.17□□□□□ -0.78
DDX39A-206ENST00000587730 VPS13BQ7Z7G8 4022 aa10.11□□□□□ -0.79
DDX39A-206ENST00000587730 J3QL48 77 aa10.11□□□□□ -0.79
DDX39A-206ENST00000587730 HERC2O95714 4834 aa10.1□□□□□ -0.79
DDX39A-206ENST00000587730 APOBP04114 4563 aaKnown RBP10.05□□□□□ -0.8
DDX39A-206ENST00000587730 PRAC1Q96KF2 57 aa10.05□□□□□ -0.8
DDX39A-206ENST00000587730 KIAA1109Q2LD37 5005 aa10.04□□□□□ -0.8
DDX39A-206ENST00000587730 C9orf92A6NGG3 77 aa10.01□□□□□ -0.81
DDX39A-206ENST00000587730 ADM2Q7Z4H4 148 aa9.98□□□□□ -0.81
DDX39A-206ENST00000587730 A0A1B0GU33 70 aa9.96□□□□□ -0.81
DDX39A-206ENST00000587730 LINC01554Q52M75 96 aa9.96□□□□□ -0.81
DDX39A-206ENST00000587730 PCLOQ9Y6V0 5065 aa9.96□□□□□ -0.82
DDX39A-206ENST00000587730 SMR3BP02814 79 aaPredicted RBP9.95□□□□□ -0.82
DDX39A-206ENST00000587730 KRTAP10-4P60372 401 aaPredicted RBP9.95□□□□□ -0.82
DDX39A-206ENST00000587730 RYR1P21817 5038 aa9.94□□□□□ -0.82
DDX39A-206ENST00000587730 KRTAP3-1Q9BYR8 98 aa9.93□□□□□ -0.82
DDX39A-206ENST00000587730 HSPG2P98160 4391 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms