RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ANKRD29Q8N6D5 301 aa7.04□□□□□ -1.28
SDF2-202ENST00000585428 HIGD1BQ9P298 99 aa7.04□□□□□ -1.28
SDF2-202ENST00000585428 LINC00846Q9NV44 126 aa7.03□□□□□ -1.28
SDF2-202ENST00000585428 C14orf144Q96I85 54 aa7.02□□□□□ -1.29
SDF2-202ENST00000585428 IGHV6-1A0A0B4J1U7 121 aa7.01□□□□□ -1.29
SDF2-202ENST00000585428 MTURNQ8N3F0 131 aa7.01□□□□□ -1.29
SDF2-202ENST00000585428 PRO1854Q9UHT4 67 aa7.01□□□□□ -1.29
SDF2-202ENST00000585428 TRIAP1O43715 76 aa6.98□□□□□ -1.29
SDF2-202ENST00000585428 C2orf91Q6ZV80 131 aa6.98□□□□□ -1.29
SDF2-202ENST00000585428 CEND1Q8N111 149 aa6.98□□□□□ -1.29
SDF2-202ENST00000585428 H3BQ85 93 aa6.97□□□□□ -1.29
SDF2-202ENST00000585428 SPINK7P58062 85 aa6.97□□□□□ -1.29
SDF2-202ENST00000585428 CCKP06307 115 aa6.96□□□□□ -1.3
SDF2-202ENST00000585428 S100A6P06703 90 aa6.96□□□□□ -1.3
SDF2-202ENST00000585428 ORMDL1Q9P0S3 153 aa6.96□□□□□ -1.3
SDF2-202ENST00000585428 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
SDF2-202ENST00000585428 C8orf87E5RJ46 101 aa6.95□□□□□ -1.3
SDF2-202ENST00000585428 TMEM256-PLSCR3K7ERE1 68 aa6.95□□□□□ -1.3
SDF2-202ENST00000585428 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
SDF2-202ENST00000585428 A0A1B0GV72 72 aa6.94□□□□□ -1.3
SDF2-202ENST00000585428 TRACP01848 142 aa6.94□□□□□ -1.3
SDF2-202ENST00000585428 A8MWP4 228 aa6.93□□□□□ -1.3
SDF2-202ENST00000585428 S100A1P23297 94 aa6.93□□□□□ -1.3
SDF2-202ENST00000585428 DNAL4O96015 105 aa6.92□□□□□ -1.3
SDF2-202ENST00000585428 FXYD2P54710 66 aa6.92□□□□□ -1.3
SDF2-202ENST00000585428 KRTAP6-3Q3LI67 103 aa6.92□□□□□ -1.3
SDF2-202ENST00000585428 SPATA45Q537H7 98 aa6.92□□□□□ -1.3
SDF2-202ENST00000585428 KRTAP4-9Q9BYQ8 210 aa6.92□□□□□ -1.3
SDF2-202ENST00000585428 PAM16Q9Y3D7 125 aa6.92□□□□□ -1.3
SDF2-202ENST00000585428 UBE2V1Q13404 147 aa6.9□□□□□ -1.3
SDF2-202ENST00000585428 LCE4AQ5TA78 99 aa6.9□□□□□ -1.3
SDF2-202ENST00000585428 Q8N9P0 234 aaPredicted RBP6.9□□□□□ -1.3
SDF2-202ENST00000585428 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
SDF2-202ENST00000585428 J3KT08 172 aa6.85□□□□□ -1.31
SDF2-202ENST00000585428 PSMB2P49721 201 aa6.85□□□□□ -1.31
SDF2-202ENST00000585428 VAMP8Q9BV40 100 aa6.85□□□□□ -1.31
SDF2-202ENST00000585428 COX6CP09669 75 aa6.84□□□□□ -1.31
SDF2-202ENST00000585428 RBM3P98179 157 aaKnown RBP6.84□□□□□ -1.31
SDF2-202ENST00000585428 VPS25Q9BRG1 176 aa6.84□□□□□ -1.31
SDF2-202ENST00000585428 WFDC13Q8IUB5 93 aa6.83□□□□□ -1.32
SDF2-202ENST00000585428 K7ERJ3 54 aa6.81□□□□□ -1.32
SDF2-202ENST00000585428 Q6ZQT0 140 aa6.81□□□□□ -1.32
SDF2-202ENST00000585428 DSCR8Q96T75 97 aa6.81□□□□□ -1.32
SDF2-202ENST00000585428 KRTAP4-2Q9BYR5 136 aa6.81□□□□□ -1.32
SDF2-202ENST00000585428 NDUFB1O75438 58 aa6.79□□□□□ -1.32
SDF2-202ENST00000585428 C8orf17Q9NRJ1 99 aa6.78□□□□□ -1.32
SDF2-202ENST00000585428 C9JAW5 83 aa6.77□□□□□ -1.33
SDF2-202ENST00000585428 HSD52Q0P140 79 aa6.77□□□□□ -1.33
SDF2-202ENST00000585428 LYRM7Q5U5X0 104 aa6.76□□□□□ -1.33
SDF2-202ENST00000585428 H1FX-AS1Q4G0G2 97 aa6.75□□□□□ -1.33
SDF2-202ENST00000585428 IGKV3D-7A0A0C4DH55 119 aa6.74□□□□□ -1.33
SDF2-202ENST00000585428 BAALC-AS2P0C853 105 aa6.74□□□□□ -1.33
SDF2-202ENST00000585428 Q6ZVQ6 151 aa6.73□□□□□ -1.33
SDF2-202ENST00000585428 SCGB1C2P0DMR2 95 aa6.72□□□□□ -1.33
SDF2-202ENST00000585428 A0A1B0GW54 56 aa6.71□□□□□ -1.34
SDF2-202ENST00000585428 PRR15Q8IV56 129 aa6.68□□□□□ -1.34
SDF2-202ENST00000585428 LOC110117498A0A087WWA1 95 aa6.66□□□□□ -1.34
SDF2-202ENST00000585428 PYY3Q5JQD4 70 aa6.66□□□□□ -1.34
SDF2-202ENST00000585428 MRPL34Q9BQ48 92 aaKnown RBP6.65□□□□□ -1.34
SDF2-202ENST00000585428 KRTAP4-11Q9BYQ6 195 aa6.65□□□□□ -1.34
SDF2-202ENST00000585428 JMJD7-PLA2G4BH0Y9G9 81 aa6.64□□□□□ -1.35
SDF2-202ENST00000585428 TMEM254Q8TBM7 123 aa6.64□□□□□ -1.35
SDF2-202ENST00000585428 NEBP20929 6669 aa6.63□□□□□ -1.35
SDF2-202ENST00000585428 MMP24-AS1A0A0U1RRL7 71 aa6.63□□□□□ -1.35
SDF2-202ENST00000585428 PDE6GP18545 87 aa6.62□□□□□ -1.35
SDF2-202ENST00000585428 UQCR10Q9UDW1 63 aa6.61□□□□□ -1.35
SDF2-202ENST00000585428 NREPQ16612 68 aa6.6□□□□□ -1.35
SDF2-202ENST00000585428 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.36
SDF2-202ENST00000585428 LOC105371267A0A1B0GV96 52 aa6.58□□□□□ -1.36
SDF2-202ENST00000585428 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
SDF2-202ENST00000585428 A6NN06 94 aa6.58□□□□□ -1.36
SDF2-202ENST00000585428 MT1BP07438 61 aa6.58□□□□□ -1.36
SDF2-202ENST00000585428 Q5W150 140 aa6.58□□□□□ -1.36
SDF2-202ENST00000585428 IGKV2D-30A0A075B6S6 120 aa6.56□□□□□ -1.36
SDF2-202ENST00000585428 IGKV2-30P06310 120 aa6.56□□□□□ -1.36
SDF2-202ENST00000585428 ATXN8Q156A1 80 aa6.56□□□□□ -1.36
SDF2-202ENST00000585428 C14orf132Q9NPU4 83 aa6.56□□□□□ -1.36
SDF2-202ENST00000585428 NDUFS5O43920 106 aa6.55□□□□□ -1.36
SDF2-202ENST00000585428 K7EQZ3 153 aa6.54□□□□□ -1.36
SDF2-202ENST00000585428 C7orf65Q6ZTY9 151 aa6.54□□□□□ -1.36
SDF2-202ENST00000585428 KRTAP19-8Q3LI54 63 aa6.53□□□□□ -1.36
SDF2-202ENST00000585428 LCE5AQ5TCM9 118 aa6.52□□□□□ -1.37
SDF2-202ENST00000585428 C4orf26Q17RF5 130 aa6.51□□□□□ -1.37
SDF2-202ENST00000585428 KRTAP20-1Q3LI63 56 aa6.51□□□□□ -1.37
SDF2-202ENST00000585428 Q5VV11 94 aa6.51□□□□□ -1.37
SDF2-202ENST00000585428 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
SDF2-202ENST00000585428 C5orf47Q569G3 176 aa6.5□□□□□ -1.37
SDF2-202ENST00000585428 NAA38Q9BRA0 125 aaKnown RBP6.5□□□□□ -1.37
SDF2-202ENST00000585428 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
SDF2-202ENST00000585428 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
SDF2-202ENST00000585428 FAM236AA0A1B0GUQ0 79 aa6.46□□□□□ -1.38
SDF2-202ENST00000585428 FAM236BA0A1B0GV22 79 aa6.46□□□□□ -1.38
SDF2-202ENST00000585428 KRTAP15-1Q3LI76 137 aa6.44□□□□□ -1.38
SDF2-202ENST00000585428 BPY2O14599 106 aa6.43□□□□□ -1.38
SDF2-202ENST00000585428 PCP4P48539 62 aa6.42□□□□□ -1.38
SDF2-202ENST00000585428 CSAG1Q6PB30 78 aa6.42□□□□□ -1.38
SDF2-202ENST00000585428 HCG22E2RYF7 251 aa6.41□□□□□ -1.38
SDF2-202ENST00000585428 CASC2Q6XLA1 102 aa6.41□□□□□ -1.38
SDF2-202ENST00000585428 KMT2DO14686 5537 aa6.41□□□□□ -1.38
SDF2-202ENST00000585428 MDN1Q9NU22 5596 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms