RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 A0A1W2PNM2 257 aa7.74□□□□□ -1.17
VAPA-209ENST00000585042 CCKP06307 115 aa7.74□□□□□ -1.17
VAPA-209ENST00000585042 Q96NJ1 140 aa7.74□□□□□ -1.17
VAPA-209ENST00000585042 C20orf166-AS1Q96NR2 134 aa7.73□□□□□ -1.17
VAPA-209ENST00000585042 A0A1B0GV90 55 aa7.71□□□□□ -1.18
VAPA-209ENST00000585042 C9JAW5 83 aa7.71□□□□□ -1.18
VAPA-209ENST00000585042 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
VAPA-209ENST00000585042 GTF2H5Q6ZYL4 71 aa7.71□□□□□ -1.18
VAPA-209ENST00000585042 A8MUU9 505 aa7.7□□□□□ -1.18
VAPA-209ENST00000585042 VPS25Q9BRG1 176 aa7.7□□□□□ -1.18
VAPA-209ENST00000585042 SPCS1Q9Y6A9 102 aa7.69□□□□□ -1.18
VAPA-209ENST00000585042 K7EP34 96 aa7.67□□□□□ -1.18
VAPA-209ENST00000585042 PDE6GP18545 87 aa7.67□□□□□ -1.18
VAPA-209ENST00000585042 KRTAP9-8Q9BYQ0 159 aa7.67□□□□□ -1.18
VAPA-209ENST00000585042 SIGMAR1Q99720 223 aa7.66□□□□□ -1.18
VAPA-209ENST00000585042 IGKV4-1P06312 121 aa7.64□□□□□ -1.19
VAPA-209ENST00000585042 A0A1B0GW54 56 aa7.63□□□□□ -1.19
VAPA-209ENST00000585042 LOC110117498A0A087WWA1 95 aa7.62□□□□□ -1.19
VAPA-209ENST00000585042 H3BT86 120 aa7.61□□□□□ -1.19
VAPA-209ENST00000585042 Q6ZQT0 140 aa7.6□□□□□ -1.19
VAPA-209ENST00000585042 LINC00472Q9H8W2 130 aa7.6□□□□□ -1.19
VAPA-209ENST00000585042 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.59□□□□□ -1.19
VAPA-209ENST00000585042 F8W1H4 67 aa7.59□□□□□ -1.19
VAPA-209ENST00000585042 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
VAPA-209ENST00000585042 J3KT08 172 aa7.58□□□□□ -1.2
VAPA-209ENST00000585042 LINC00313P59037 77 aa7.58□□□□□ -1.2
VAPA-209ENST00000585042 KRTAP19-4Q3LI73 84 aa7.58□□□□□ -1.2
VAPA-209ENST00000585042 C14orf132Q9NPU4 83 aa7.58□□□□□ -1.2
VAPA-209ENST00000585042 DEFB116Q30KQ4 102 aa7.57□□□□□ -1.2
VAPA-209ENST00000585042 DSCR10P59022 87 aa7.56□□□□□ -1.2
VAPA-209ENST00000585042 IGHV6-1A0A0B4J1U7 121 aa7.53□□□□□ -1.2
VAPA-209ENST00000585042 NDUFB1O75438 58 aa7.53□□□□□ -1.2
VAPA-209ENST00000585042 RBM12B-AS1Q9P1G2 102 aa7.53□□□□□ -1.2
VAPA-209ENST00000585042 PRO0461Q9UI25 63 aa7.53□□□□□ -1.2
VAPA-209ENST00000585042 FAM236DA0A1B0GTK5 79 aa7.52□□□□□ -1.21
VAPA-209ENST00000585042 KRTAP16-1A8MUX0 517 aa7.52□□□□□ -1.21
VAPA-209ENST00000585042 C8orf87E5RJ46 101 aa7.52□□□□□ -1.21
VAPA-209ENST00000585042 FAM236CP0DP71 79 aa7.52□□□□□ -1.21
VAPA-209ENST00000585042 MTURNQ8N3F0 131 aa7.52□□□□□ -1.21
VAPA-209ENST00000585042 MT2AP02795 61 aa7.51□□□□□ -1.21
VAPA-209ENST00000585042 MPLKIPQ8TAP9 179 aa7.51□□□□□ -1.21
VAPA-209ENST00000585042 A0A1B0GVX0 72 aa7.5□□□□□ -1.21
VAPA-209ENST00000585042 NREPQ16612 68 aa7.5□□□□□ -1.21
VAPA-209ENST00000585042 USH2AO75445 5202 aa7.49□□□□□ -1.21
VAPA-209ENST00000585042 HRES1P13985 223 aa7.47□□□□□ -1.21
VAPA-209ENST00000585042 SSPOA2VEC9 5147 aa7.46□□□□□ -1.22
VAPA-209ENST00000585042 A8MWP4 228 aa7.45□□□□□ -1.22
VAPA-209ENST00000585042 NOTCH2NLQ7Z3S9 236 aa7.45□□□□□ -1.22
VAPA-209ENST00000585042 MT1FP04733 61 aa7.44□□□□□ -1.22
VAPA-209ENST00000585042 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
VAPA-209ENST00000585042 KRTAP9-3Q9BYQ3 159 aa7.44□□□□□ -1.22
VAPA-209ENST00000585042 ETDBQ3ZM63 59 aa7.43□□□□□ -1.22
VAPA-209ENST00000585042 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
VAPA-209ENST00000585042 KRTAP19-1Q8IUB9 90 aa7.41□□□□□ -1.22
VAPA-209ENST00000585042 FCGBPQ9Y6R7 5405 aaPredicted RBP7.39□□□□□ -1.23
VAPA-209ENST00000585042 IGKV3D-7A0A0C4DH55 119 aa7.38□□□□□ -1.23
VAPA-209ENST00000585042 BPY2O14599 106 aa7.38□□□□□ -1.23
VAPA-209ENST00000585042 PRR15Q8IV56 129 aa7.38□□□□□ -1.23
VAPA-209ENST00000585042 C8orf17Q9NRJ1 99 aa7.38□□□□□ -1.23
VAPA-209ENST00000585042 J3QR89 54 aa7.37□□□□□ -1.23
VAPA-209ENST00000585042 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
VAPA-209ENST00000585042 Q6ZVQ6 151 aa7.34□□□□□ -1.23
VAPA-209ENST00000585042 UBL5Q9BZL1 73 aa7.34□□□□□ -1.23
VAPA-209ENST00000585042 K7ERU9 68 aa7.33□□□□□ -1.24
VAPA-209ENST00000585042 Q8N9P0 234 aaPredicted RBP7.33□□□□□ -1.24
VAPA-209ENST00000585042 ZCCHC13Q8WW36 166 aaKnown RBP7.33□□□□□ -1.24
VAPA-209ENST00000585042 KRTAP4-12Q9BQ66 201 aa7.33□□□□□ -1.24
VAPA-209ENST00000585042 SPINK7P58062 85 aa7.31□□□□□ -1.24
VAPA-209ENST00000585042 K7EQZ3 153 aa7.3□□□□□ -1.24
VAPA-209ENST00000585042 TMEM254Q8TBM7 123 aa7.3□□□□□ -1.24
VAPA-209ENST00000585042 hDV103S1A0JD37 113 aa7.29□□□□□ -1.24
VAPA-209ENST00000585042 ACYP1P07311 99 aa7.29□□□□□ -1.24
VAPA-209ENST00000585042 MRPL34Q9BQ48 92 aaKnown RBP7.29□□□□□ -1.24
VAPA-209ENST00000585042 MMP24-AS1A0A0U1RRL7 71 aa7.28□□□□□ -1.24
VAPA-209ENST00000585042 FAM240AA0A1B0GVK7 77 aa7.27□□□□□ -1.25
VAPA-209ENST00000585042 KRTAP19-6Q3LI70 58 aa7.26□□□□□ -1.25
VAPA-209ENST00000585042 NDUFS5O43920 106 aa7.25□□□□□ -1.25
VAPA-209ENST00000585042 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
VAPA-209ENST00000585042 CASC2Q6XLA1 102 aa7.22□□□□□ -1.25
VAPA-209ENST00000585042 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.26
VAPA-209ENST00000585042 Q8N9L7 120 aa7.21□□□□□ -1.26
VAPA-209ENST00000585042 WFDC13Q8IUB5 93 aa7.2□□□□□ -1.26
VAPA-209ENST00000585042 CXCL6P80162 114 aa7.17□□□□□ -1.26
VAPA-209ENST00000585042 HCG22E2RYF7 251 aa7.16□□□□□ -1.26
VAPA-209ENST00000585042 LCE3BQ5TA77 95 aa7.15□□□□□ -1.26
VAPA-209ENST00000585042 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
VAPA-209ENST00000585042 SYNE2Q8WXH0 6885 aaKnown RBP7.14□□□□□ -1.27
VAPA-209ENST00000585042 LINC00643Q86TS7 51 aa7.13□□□□□ -1.27
VAPA-209ENST00000585042 SVIPQ8NHG7 77 aa7.13□□□□□ -1.27
VAPA-209ENST00000585042 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
VAPA-209ENST00000585042 ATP5EP2Q5VTU8 51 aa7.08□□□□□ -1.28
VAPA-209ENST00000585042 C7orf65Q6ZTY9 151 aa7.08□□□□□ -1.28
VAPA-209ENST00000585042 IGKV2D-30A0A075B6S6 120 aa7.07□□□□□ -1.28
VAPA-209ENST00000585042 IGKV2-30P06310 120 aa7.07□□□□□ -1.28
VAPA-209ENST00000585042 KRTAP6-3Q3LI67 103 aa7.07□□□□□ -1.28
VAPA-209ENST00000585042 Q5W150 140 aa7.06□□□□□ -1.28
VAPA-209ENST00000585042 TP53AIP1Q9HCN2 124 aa7.06□□□□□ -1.28
VAPA-209ENST00000585042 IMUPQ9GZP8 106 aa7.03□□□□□ -1.28
VAPA-209ENST00000585042 HIST1H4AP62805 103 aaKnown RBP7□□□□□ -1.29
VAPA-209ENST00000585042 MT-ATP8P03928 68 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms