RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 FCGBPQ9Y6R7 5405 aaPredicted RBP9.77□□□□□ -0.85
TOP3A-220ENST00000585031 SSBP3-AS1Q7Z2R9 100 aa9.74□□□□□ -0.85
TOP3A-220ENST00000585031 LINC00643Q86TS7 51 aa9.74□□□□□ -0.85
TOP3A-220ENST00000585031 SMIM29Q86T20 159 aa9.73□□□□□ -0.85
TOP3A-220ENST00000585031 UBL5Q9BZL1 73 aa9.72□□□□□ -0.85
TOP3A-220ENST00000585031 LINC00846Q9NV44 126 aa9.72□□□□□ -0.85
TOP3A-220ENST00000585031 A0A1B0GW54 56 aa9.71□□□□□ -0.86
TOP3A-220ENST00000585031 C9orf92A6NGG3 77 aa9.71□□□□□ -0.86
TOP3A-220ENST00000585031 MT-ATP8P03928 68 aa9.7□□□□□ -0.86
TOP3A-220ENST00000585031 Q6JHZ5 121 aa9.69□□□□□ -0.86
TOP3A-220ENST00000585031 ATP5EP2Q5VTU8 51 aa9.67□□□□□ -0.86
TOP3A-220ENST00000585031 SCGB1A1P11684 91 aa9.64□□□□□ -0.87
TOP3A-220ENST00000585031 Q6Q795 121 aa9.63□□□□□ -0.87
TOP3A-220ENST00000585031 IMUPQ9GZP8 106 aa9.63□□□□□ -0.87
TOP3A-220ENST00000585031 TRBV7-7A0A0K0K1E9 115 aa9.62□□□□□ -0.87
TOP3A-220ENST00000585031 A0A1W2PNM2 257 aa9.62□□□□□ -0.87
TOP3A-220ENST00000585031 IGFL1Q6UW32 110 aa9.62□□□□□ -0.87
TOP3A-220ENST00000585031 COX6B2Q6YFQ2 88 aa9.62□□□□□ -0.87
TOP3A-220ENST00000585031 Q6ZVQ6 151 aa9.61□□□□□ -0.87
TOP3A-220ENST00000585031 C9orf153Q5TBE3 101 aa9.6□□□□□ -0.87
TOP3A-220ENST00000585031 NREPQ16612 68 aa9.59□□□□□ -0.87
TOP3A-220ENST00000585031 IGKV3D-7A0A0C4DH55 119 aa9.57□□□□□ -0.88
TOP3A-220ENST00000585031 CXCL6P80162 114 aa9.55□□□□□ -0.88
TOP3A-220ENST00000585031 HRCT1Q6UXD1 115 aa9.54□□□□□ -0.88
TOP3A-220ENST00000585031 KRTAP9-8Q9BYQ0 159 aa9.54□□□□□ -0.88
TOP3A-220ENST00000585031 SYNE2Q8WXH0 6885 aaKnown RBP9.53□□□□□ -0.88
TOP3A-220ENST00000585031 MACF1Q9UPN3 7388 aaKnown RBP9.52□□□□□ -0.89
TOP3A-220ENST00000585031 KRTAP19-1Q8IUB9 90 aa9.51□□□□□ -0.89
TOP3A-220ENST00000585031 RPL37P61927 97 aaKnown RBP9.5□□□□□ -0.89
TOP3A-220ENST00000585031 A0A087WSZ3 146 aa9.49□□□□□ -0.89
TOP3A-220ENST00000585031 A0A0G2JQZ4 141 aa9.49□□□□□ -0.89
TOP3A-220ENST00000585031 BPY2O14599 106 aa9.49□□□□□ -0.89
TOP3A-220ENST00000585031 HIST1H4AP62805 103 aaKnown RBP9.48□□□□□ -0.89
TOP3A-220ENST00000585031 LIMD2Q9BT23 127 aa9.46□□□□□ -0.9
TOP3A-220ENST00000585031 SS18L2Q9UHA2 77 aa9.46□□□□□ -0.9
TOP3A-220ENST00000585031 PCP4P48539 62 aa9.44□□□□□ -0.9
TOP3A-220ENST00000585031 FAM236AA0A1B0GUQ0 79 aa9.43□□□□□ -0.9
TOP3A-220ENST00000585031 FAM236BA0A1B0GV22 79 aa9.43□□□□□ -0.9
TOP3A-220ENST00000585031 CD164Q04900 197 aa9.42□□□□□ -0.9
TOP3A-220ENST00000585031 LCE2BO14633 110 aa9.4□□□□□ -0.9
TOP3A-220ENST00000585031 C1orf195Q5TG92 126 aa9.39□□□□□ -0.91
TOP3A-220ENST00000585031 A0A087WVE0 104 aa9.38□□□□□ -0.91
TOP3A-220ENST00000585031 J3KT08 172 aa9.38□□□□□ -0.91
TOP3A-220ENST00000585031 ATOX1O00244 68 aa9.37□□□□□ -0.91
TOP3A-220ENST00000585031 ANAPC13Q9BS18 74 aa9.37□□□□□ -0.91
TOP3A-220ENST00000585031 IGKV4-1P06312 121 aa9.35□□□□□ -0.91
TOP3A-220ENST00000585031 LINC00472Q9H8W2 130 aa9.34□□□□□ -0.91
TOP3A-220ENST00000585031 DSCR10P59022 87 aa9.32□□□□□ -0.92
TOP3A-220ENST00000585031 Q8N9L7 120 aa9.32□□□□□ -0.92
TOP3A-220ENST00000585031 MT2AP02795 61 aa9.31□□□□□ -0.92
TOP3A-220ENST00000585031 Q5XG85 94 aa9.3□□□□□ -0.92
TOP3A-220ENST00000585031 NDUFB1O75438 58 aa9.29□□□□□ -0.92
TOP3A-220ENST00000585031 DEFB116Q30KQ4 102 aa9.29□□□□□ -0.92
TOP3A-220ENST00000585031 A8MWP4 228 aa9.28□□□□□ -0.92
TOP3A-220ENST00000585031 K7EQZ3 153 aa9.28□□□□□ -0.92
TOP3A-220ENST00000585031 SMIM20Q8N5G0 67 aa9.28□□□□□ -0.92
TOP3A-220ENST00000585031 MT1FP04733 61 aa9.26□□□□□ -0.93
TOP3A-220ENST00000585031 KRTAP9-3Q9BYQ3 159 aa9.26□□□□□ -0.93
TOP3A-220ENST00000585031 PRR15Q8IV56 129 aa9.25□□□□□ -0.93
TOP3A-220ENST00000585031 Q96NJ1 140 aa9.25□□□□□ -0.93
TOP3A-220ENST00000585031 KRTAP6-3Q3LI67 103 aa9.23□□□□□ -0.93
TOP3A-220ENST00000585031 HCG22E2RYF7 251 aa9.22□□□□□ -0.93
TOP3A-220ENST00000585031 SERP2Q8N6R1 65 aa9.22□□□□□ -0.93
TOP3A-220ENST00000585031 TRAV7A0A075B6U4 112 aa9.19□□□□□ -0.94
TOP3A-220ENST00000585031 A0A1B0GVX0 72 aa9.18□□□□□ -0.94
TOP3A-220ENST00000585031 COX7CP15954 63 aa9.18□□□□□ -0.94
TOP3A-220ENST00000585031 UQCRQO14949 82 aa9.17□□□□□ -0.94
TOP3A-220ENST00000585031 KRTAP19-6Q3LI70 58 aa9.17□□□□□ -0.94
TOP3A-220ENST00000585031 CASC2Q6XLA1 102 aa9.15□□□□□ -0.94
TOP3A-220ENST00000585031 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
TOP3A-220ENST00000585031 WFDC13Q8IUB5 93 aa9.14□□□□□ -0.95
TOP3A-220ENST00000585031 IGHV6-1A0A0B4J1U7 121 aa9.13□□□□□ -0.95
TOP3A-220ENST00000585031 Q75L30 129 aa9.13□□□□□ -0.95
TOP3A-220ENST00000585031 MMP24-AS1A0A0U1RRL7 71 aa9.12□□□□□ -0.95
TOP3A-220ENST00000585031 C8orf17Q9NRJ1 99 aa9.12□□□□□ -0.95
TOP3A-220ENST00000585031 C8orf87E5RJ46 101 aa9.11□□□□□ -0.95
TOP3A-220ENST00000585031 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
TOP3A-220ENST00000585031 CCDC179H3BU77 68 aa9.1□□□□□ -0.95
TOP3A-220ENST00000585031 KRTAP10-10P60014 251 aa9.1□□□□□ -0.95
TOP3A-220ENST00000585031 OCR1Q9BZK8 76 aa9.09□□□□□ -0.95
TOP3A-220ENST00000585031 TMEM254Q8TBM7 123 aa9.05□□□□□ -0.96
TOP3A-220ENST00000585031 NEBP20929 6669 aa9.03□□□□□ -0.96
TOP3A-220ENST00000585031 MRPL34Q9BQ48 92 aaKnown RBP9.02□□□□□ -0.97
TOP3A-220ENST00000585031 LINC00313P59037 77 aa9.01□□□□□ -0.97
TOP3A-220ENST00000585031 C20orf197Q8N268 126 aa9.01□□□□□ -0.97
TOP3A-220ENST00000585031 TP53AIP1Q9HCN2 124 aa9.01□□□□□ -0.97
TOP3A-220ENST00000585031 C5orf47Q569G3 176 aa8.99□□□□□ -0.97
TOP3A-220ENST00000585031 NDUFS5O43920 106 aa8.97□□□□□ -0.97
TOP3A-220ENST00000585031 MP68P56378 58 aa8.96□□□□□ -0.98
TOP3A-220ENST00000585031 NOTCH2NLQ7Z3S9 236 aa8.96□□□□□ -0.98
TOP3A-220ENST00000585031 KRTAP16-1A8MUX0 517 aa8.95□□□□□ -0.98
TOP3A-220ENST00000585031 KLKP1Q107X0 134 aa8.95□□□□□ -0.98
TOP3A-220ENST00000585031 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
TOP3A-220ENST00000585031 A8MUU9 505 aa8.93□□□□□ -0.98
TOP3A-220ENST00000585031 H3BPC8 53 aa8.92□□□□□ -0.98
TOP3A-220ENST00000585031 NDUFC1O43677 76 aa8.92□□□□□ -0.98
TOP3A-220ENST00000585031 MUC12Q9UKN1 5478 aa8.92□□□□□ -0.98
TOP3A-220ENST00000585031 TRAV22A0A0B4J277 110 aa8.91□□□□□ -0.98
TOP3A-220ENST00000585031 H0Y9P7 68 aa8.91□□□□□ -0.98
TOP3A-220ENST00000585031 SNURFQ9Y675 71 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms