RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
RFFL-212ENST00000584655 V9GYY9 64 aa6.11□□□□□ -1.43
RFFL-212ENST00000584655 FAT2Q9NYQ8 4349 aa6.11□□□□□ -1.43
RFFL-212ENST00000584655 H0Y9P7 68 aa6.11□□□□□ -1.43
RFFL-212ENST00000584655 PRR15LQ9BU68 103 aa6.1□□□□□ -1.43
RFFL-212ENST00000584655 MYCBP2O75592 4640 aa6.1□□□□□ -1.43
RFFL-212ENST00000584655 ZNF706Q9Y5V0 76 aaPredicted RBP6.09□□□□□ -1.43
RFFL-212ENST00000584655 SACSQ9NZJ4 4579 aa6.08□□□□□ -1.44
RFFL-212ENST00000584655 A6NED7 52 aa6.08□□□□□ -1.44
RFFL-212ENST00000584655 PMAIP1Q13794 54 aa6.08□□□□□ -1.44
RFFL-212ENST00000584655 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
RFFL-212ENST00000584655 KIAA1109Q2LD37 5005 aa6.07□□□□□ -1.44
RFFL-212ENST00000584655 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
RFFL-212ENST00000584655 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
RFFL-212ENST00000584655 VPS13BQ7Z7G8 4022 aa6.06□□□□□ -1.44
RFFL-212ENST00000584655 A0A1B0GW54 56 aa6.06□□□□□ -1.44
RFFL-212ENST00000584655 KRTAP13-2Q52LG2 175 aa6.05□□□□□ -1.44
RFFL-212ENST00000584655 TRAV22A0A0B4J277 110 aa6.04□□□□□ -1.44
RFFL-212ENST00000584655 A8MU10 97 aa6.04□□□□□ -1.44
RFFL-212ENST00000584655 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
RFFL-212ENST00000584655 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
RFFL-212ENST00000584655 DYNC1H1Q14204 4646 aaKnown RBP6.03□□□□□ -1.44
RFFL-212ENST00000584655 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
RFFL-212ENST00000584655 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
RFFL-212ENST00000584655 IGKV2-30P06310 120 aa6.03□□□□□ -1.44
RFFL-212ENST00000584655 A8MWP4 228 aa6.02□□□□□ -1.45
RFFL-212ENST00000584655 LINC00472Q9H8W2 130 aa6.01□□□□□ -1.45
RFFL-212ENST00000584655 Q96NJ1 140 aa6□□□□□ -1.45
RFFL-212ENST00000584655 C8orf17Q9NRJ1 99 aa5.99□□□□□ -1.45
RFFL-212ENST00000584655 RYR3Q15413 4870 aa5.98□□□□□ -1.45
RFFL-212ENST00000584655 SEC61GP60059 68 aa5.98□□□□□ -1.45
RFFL-212ENST00000584655 SPINK1P00995 79 aa5.97□□□□□ -1.45
RFFL-212ENST00000584655 FAM229AH3BQW9 127 aa5.96□□□□□ -1.45
RFFL-212ENST00000584655 SPRR1BP22528 89 aa5.96□□□□□ -1.46
RFFL-212ENST00000584655 APOBP04114 4563 aaKnown RBP5.96□□□□□ -1.46
RFFL-212ENST00000584655 A0A1B0GVX0 72 aa5.96□□□□□ -1.46
RFFL-212ENST00000584655 MMP24-AS1A0A0U1RRL7 71 aa5.95□□□□□ -1.46
RFFL-212ENST00000584655 LINC00304Q8N9R0 145 aa5.95□□□□□ -1.46
RFFL-212ENST00000584655 LINC00313P59037 77 aa5.94□□□□□ -1.46
RFFL-212ENST00000584655 IGLV8-61A0A075B6I0 122 aa5.93□□□□□ -1.46
RFFL-212ENST00000584655 COA5Q86WW8 74 aa5.93□□□□□ -1.46
RFFL-212ENST00000584655 Q5VSD8 79 aa5.92□□□□□ -1.46
RFFL-212ENST00000584655 Q5W150 140 aa5.92□□□□□ -1.46
RFFL-212ENST00000584655 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
RFFL-212ENST00000584655 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
RFFL-212ENST00000584655 Q6ZSA8 131 aa5.91□□□□□ -1.46
RFFL-212ENST00000584655 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
RFFL-212ENST00000584655 RYR1P21817 5038 aa5.9□□□□□ -1.46
RFFL-212ENST00000584655 LINC00483Q53H64 154 aa5.9□□□□□ -1.46
RFFL-212ENST00000584655 SSBP3-AS1Q7Z2R9 100 aa5.89□□□□□ -1.47
RFFL-212ENST00000584655 PKD1P98161 4303 aa5.88□□□□□ -1.47
RFFL-212ENST00000584655 EPPK1P58107 5090 aaKnown RBP5.88□□□□□ -1.47
RFFL-212ENST00000584655 RYR2Q92736 4967 aa5.88□□□□□ -1.47
RFFL-212ENST00000584655 Q8N1X5 172 aa5.87□□□□□ -1.47
RFFL-212ENST00000584655 ALMS1Q8TCU4 4167 aa5.87□□□□□ -1.47
RFFL-212ENST00000584655 Q5VV11 94 aa5.85□□□□□ -1.47
RFFL-212ENST00000584655 J3QL48 77 aa5.85□□□□□ -1.47
RFFL-212ENST00000584655 Q1T7F1 81 aa5.85□□□□□ -1.47
RFFL-212ENST00000584655 LIMD2Q9BT23 127 aa5.85□□□□□ -1.47
RFFL-212ENST00000584655 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.47
RFFL-212ENST00000584655 ZCCHC13Q8WW36 166 aaKnown RBP5.84□□□□□ -1.47
RFFL-212ENST00000584655 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
RFFL-212ENST00000584655 CD164Q04900 197 aa5.83□□□□□ -1.48
RFFL-212ENST00000584655 A0A1B0GVY2 172 aa5.81□□□□□ -1.48
RFFL-212ENST00000584655 KRTAP17-1Q9BYP8 105 aa5.81□□□□□ -1.48
RFFL-212ENST00000584655 CYP4F30PQ9H0H9 118 aa5.8□□□□□ -1.48
RFFL-212ENST00000584655 H3BPC8 53 aa5.79□□□□□ -1.48
RFFL-212ENST00000584655 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
RFFL-212ENST00000584655 LOC101927531A0A1B0GV80 90 aa5.78□□□□□ -1.48
RFFL-212ENST00000584655 SPINK7P58062 85 aa5.77□□□□□ -1.48
RFFL-212ENST00000584655 LCA10Q71F78 164 aa5.76□□□□□ -1.49
RFFL-212ENST00000584655 PRAC1Q96KF2 57 aa5.75□□□□□ -1.49
RFFL-212ENST00000584655 C7orf65Q6ZTY9 151 aa5.74□□□□□ -1.49
RFFL-212ENST00000584655 HRES1P13985 223 aa5.73□□□□□ -1.49
RFFL-212ENST00000584655 HSPG2P98160 4391 aa5.73□□□□□ -1.49
RFFL-212ENST00000584655 SPANXA2-OT1Q8N9U9 137 aa5.72□□□□□ -1.49
RFFL-212ENST00000584655 IGLV7-46A0A075B6I9 117 aa5.72□□□□□ -1.49
RFFL-212ENST00000584655 C8orf87E5RJ46 101 aa5.72□□□□□ -1.49
RFFL-212ENST00000584655 A0A1B0GU69 56 aa5.71□□□□□ -1.5
RFFL-212ENST00000584655 RBM12B-AS1Q9P1G2 102 aa5.7□□□□□ -1.5
RFFL-212ENST00000584655 KTN1-AS1Q86SY8 53 aa5.69□□□□□ -1.5
RFFL-212ENST00000584655 ATP11AUNQ6ZP68 121 aa5.68□□□□□ -1.5
RFFL-212ENST00000584655 ACYP2P14621 99 aa5.67□□□□□ -1.5
RFFL-212ENST00000584655 LRP2P98164 4655 aa5.66□□□□□ -1.5
RFFL-212ENST00000584655 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.5
RFFL-212ENST00000584655 Q75L30 129 aa5.65□□□□□ -1.5
RFFL-212ENST00000584655 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.51
RFFL-212ENST00000584655 LPAP08519 4548 aa5.64□□□□□ -1.51
RFFL-212ENST00000584655 MUC2Q02817 5179 aa5.64□□□□□ -1.51
RFFL-212ENST00000584655 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
RFFL-212ENST00000584655 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
RFFL-212ENST00000584655 ABCA13Q86UQ4 5058 aa5.62□□□□□ -1.51
RFFL-212ENST00000584655 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
RFFL-212ENST00000584655 HERC2O95714 4834 aa5.57□□□□□ -1.52
RFFL-212ENST00000584655 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
RFFL-212ENST00000584655 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
RFFL-212ENST00000584655 PKHD1L1Q86WI1 4243 aa5.54□□□□□ -1.52
RFFL-212ENST00000584655 ASB16-AS1Q495Z4 193 aa5.54□□□□□ -1.52
RFFL-212ENST00000584655 A6NN06 94 aa5.53□□□□□ -1.52
RFFL-212ENST00000584655 UQCR11O14957 56 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms