RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	DNAH2	Q9P225	4427 aa		7.98	□□□□□ -1.13
CSNK1D-222	ENST00000584377	TG	P01266	2768 aa		7.97	□□□□□ -1.13
CSNK1D-222	ENST00000584377	IGLV7-46	A0A075B6I9	117 aa		7.97	□□□□□ -1.13
CSNK1D-222	ENST00000584377	C4orf48	Q5BLP8	95 aa		7.96	□□□□□ -1.13
CSNK1D-222	ENST00000584377	C1orf134	Q5TEV5	83 aa		7.96	□□□□□ -1.14
CSNK1D-222	ENST00000584377	SPAG11A	Q6PDA7	123 aa		7.96	□□□□□ -1.14
CSNK1D-222	ENST00000584377	LINC01558	Q9Y6Z2	57 aa		7.96	□□□□□ -1.14
CSNK1D-222	ENST00000584377	ZNF861P	O60384	105 aa		7.95	□□□□□ -1.14
CSNK1D-222	ENST00000584377	WWC2-AS2	Q96NR7	200 aa		7.95	□□□□□ -1.14
CSNK1D-222	ENST00000584377	C8orf87	E5RJ46	101 aa		7.94	□□□□□ -1.14
CSNK1D-222	ENST00000584377	DNAH17	Q9UFH2	4485 aa		7.94	□□□□□ -1.14
CSNK1D-222	ENST00000584377	MMP24-AS1	A0A0U1RRL7	71 aa		7.93	□□□□□ -1.14
CSNK1D-222	ENST00000584377		Q96NJ1	140 aa		7.93	□□□□□ -1.14
CSNK1D-222	ENST00000584377	ANAPC11	Q9NYG5	84 aa		7.93	□□□□□ -1.14
CSNK1D-222	ENST00000584377	FRAS1	Q86XX4	4008 aa		7.93	□□□□□ -1.14
CSNK1D-222	ENST00000584377	SPINK7	P58062	85 aa		7.92	□□□□□ -1.14
CSNK1D-222	ENST00000584377	DNHD1	Q96M86	4753 aa		7.92	□□□□□ -1.14
CSNK1D-222	ENST00000584377	FBN3	Q75N90	2809 aa		7.92	□□□□□ -1.14
CSNK1D-222	ENST00000584377	LY6G6C	O95867	125 aa		7.91	□□□□□ -1.14
CSNK1D-222	ENST00000584377	PCOTH	Q58A44	107 aa		7.9	□□□□□ -1.14
CSNK1D-222	ENST00000584377	DNAH8	Q96JB1	4490 aa		7.9	□□□□□ -1.15
CSNK1D-222	ENST00000584377	IGLV7-43	P04211	117 aa		7.86	□□□□□ -1.15
CSNK1D-222	ENST00000584377	LINC00313	P59037	77 aa		7.85	□□□□□ -1.15
CSNK1D-222	ENST00000584377	C8orf17	Q9NRJ1	99 aa		7.85	□□□□□ -1.15
CSNK1D-222	ENST00000584377	ASB16-AS1	Q495Z4	193 aa		7.85	□□□□□ -1.15
CSNK1D-222	ENST00000584377	IGHV6-1	A0A0B4J1U7	121 aa		7.85	□□□□□ -1.15
CSNK1D-222	ENST00000584377		A0A1B0GVX0	72 aa		7.84	□□□□□ -1.15
CSNK1D-222	ENST00000584377	CDK2AP2	O75956	126 aa		7.84	□□□□□ -1.15
CSNK1D-222	ENST00000584377	PRAC1	Q96KF2	57 aa		7.83	□□□□□ -1.16
CSNK1D-222	ENST00000584377	HRES1	P13985	223 aa		7.82	□□□□□ -1.16
CSNK1D-222	ENST00000584377	TP53AIP1	Q9HCN2	124 aa		7.82	□□□□□ -1.16
CSNK1D-222	ENST00000584377	DNAH6	Q9C0G6	4158 aa		7.81	□□□□□ -1.16
CSNK1D-222	ENST00000584377	KRTAP10-2	P60368	255 aa		7.81	□□□□□ -1.16
CSNK1D-222	ENST00000584377	CIRBP-AS1	Q8TBR5	109 aa		7.81	□□□□□ -1.16
CSNK1D-222	ENST00000584377	DNAH11	Q96DT5	4516 aa		7.77	□□□□□ -1.17
CSNK1D-222	ENST00000584377	SPINK6	Q6UWN8	80 aa		7.77	□□□□□ -1.17
CSNK1D-222	ENST00000584377	ADM2	Q7Z4H4	148 aa		7.77	□□□□□ -1.17
CSNK1D-222	ENST00000584377	MRPL34	Q9BQ48	92 aa	Known RBP	7.77	□□□□□ -1.17
CSNK1D-222	ENST00000584377	DNAH5	Q8TE73	4624 aa		7.77	□□□□□ -1.17
CSNK1D-222	ENST00000584377		A0A087X002	238 aa		7.77	□□□□□ -1.17
CSNK1D-222	ENST00000584377	NOTCH2NL	Q7Z3S9	236 aa		7.77	□□□□□ -1.17
CSNK1D-222	ENST00000584377	ALMS1	Q8TCU4	4167 aa		7.76	□□□□□ -1.17
CSNK1D-222	ENST00000584377	LINC01554	Q52M75	96 aa		7.75	□□□□□ -1.17
CSNK1D-222	ENST00000584377		H3BS24	57 aa		7.74	□□□□□ -1.17
CSNK1D-222	ENST00000584377	SSBP3-AS1	Q7Z2R9	100 aa		7.74	□□□□□ -1.17
CSNK1D-222	ENST00000584377	PLA2G1B	P04054	148 aa	Known RBP	7.73	□□□□□ -1.17
CSNK1D-222	ENST00000584377	PRR26	Q8N8Z3	221 aa		7.73	□□□□□ -1.17
CSNK1D-222	ENST00000584377	KRTAP10-1	P60331	282 aa		7.71	□□□□□ -1.18
CSNK1D-222	ENST00000584377		Q6ZSA8	131 aa		7.71	□□□□□ -1.18
CSNK1D-222	ENST00000584377	HYDIN	Q4G0P3	5121 aa		7.66	□□□□□ -1.18
CSNK1D-222	ENST00000584377	PKD1	P98161	4303 aa		7.66	□□□□□ -1.18
CSNK1D-222	ENST00000584377	LRP1B	Q9NZR2	4599 aa		7.66	□□□□□ -1.18
CSNK1D-222	ENST00000584377	KRTAP13-2	Q52LG2	175 aa		7.66	□□□□□ -1.18
CSNK1D-222	ENST00000584377	FAT2	Q9NYQ8	4349 aa		7.65	□□□□□ -1.19
CSNK1D-222	ENST00000584377		Q5W150	140 aa		7.63	□□□□□ -1.19
CSNK1D-222	ENST00000584377	KRTAP13-3	Q3SY46	172 aa		7.6	□□□□□ -1.19
CSNK1D-222	ENST00000584377	KRTAP1-4	P0C5Y4	121 aa		7.59	□□□□□ -1.19
CSNK1D-222	ENST00000584377	ACYP2	P14621	99 aa		7.58	□□□□□ -1.2
CSNK1D-222	ENST00000584377	SPATA8	Q6RVD6	105 aa		7.58	□□□□□ -1.2
CSNK1D-222	ENST00000584377	VPS13B	Q7Z7G8	4022 aa		7.58	□□□□□ -1.2
CSNK1D-222	ENST00000584377		A0A1B0GU69	56 aa		7.56	□□□□□ -1.2
CSNK1D-222	ENST00000584377	CSAG1	Q6PB30	78 aa		7.53	□□□□□ -1.2
CSNK1D-222	ENST00000584377	FAM229A	H3BQW9	127 aa		7.53	□□□□□ -1.2
CSNK1D-222	ENST00000584377	MIR22HG	Q0VDD5	57 aa		7.52	□□□□□ -1.21
CSNK1D-222	ENST00000584377	KRTAP21-3	Q3LHN1	58 aa		7.51	□□□□□ -1.21
CSNK1D-222	ENST00000584377	TYMSOS	Q8TAI1	123 aa		7.51	□□□□□ -1.21
CSNK1D-222	ENST00000584377	RETNLB	Q9BQ08	111 aa		7.51	□□□□□ -1.21
CSNK1D-222	ENST00000584377	KRTAP16-1	A8MUX0	517 aa		7.49	□□□□□ -1.21
CSNK1D-222	ENST00000584377	UQCR11	O14957	56 aa		7.49	□□□□□ -1.21
CSNK1D-222	ENST00000584377	DMAC1	Q96GE9	116 aa		7.49	□□□□□ -1.21
CSNK1D-222	ENST00000584377	PKHD1	P08F94	4074 aa		7.49	□□□□□ -1.21
CSNK1D-222	ENST00000584377	SPINK1	P00995	79 aa		7.46	□□□□□ -1.21
CSNK1D-222	ENST00000584377	IGKV2-30	P06310	120 aa		7.45	□□□□□ -1.22
CSNK1D-222	ENST00000584377	SACS	Q9NZJ4	4579 aa		7.43	□□□□□ -1.22
CSNK1D-222	ENST00000584377	LINC00304	Q8N9R0	145 aa		7.4	□□□□□ -1.22
CSNK1D-222	ENST00000584377	SMR3B	P02814	79 aa	Predicted RBP	7.39	□□□□□ -1.23
CSNK1D-222	ENST00000584377	IGKV2D-30	A0A075B6S6	120 aa		7.38	□□□□□ -1.23
CSNK1D-222	ENST00000584377	DYNC1H1	Q14204	4646 aa	Known RBP	7.36	□□□□□ -1.23
CSNK1D-222	ENST00000584377	RPS29	P62273	56 aa	Known RBP	7.36	□□□□□ -1.23
CSNK1D-222	ENST00000584377		A0A1B0GVY2	172 aa		7.32	□□□□□ -1.24
CSNK1D-222	ENST00000584377	FAT1	Q14517	4588 aa		7.3	□□□□□ -1.24
CSNK1D-222	ENST00000584377	KRTAP10-4	P60372	401 aa	Predicted RBP	7.28	□□□□□ -1.24
CSNK1D-222	ENST00000584377	APOB	P04114	4563 aa	Known RBP	7.27	□□□□□ -1.25
CSNK1D-222	ENST00000584377	ROMO1	P60602	79 aa		7.26	□□□□□ -1.25
CSNK1D-222	ENST00000584377	KRTAP25-1	Q3LHN0	102 aa		7.24	□□□□□ -1.25
CSNK1D-222	ENST00000584377	C9orf92	A6NGG3	77 aa		7.23	□□□□□ -1.25
CSNK1D-222	ENST00000584377	PKHD1L1	Q86WI1	4243 aa		7.22	□□□□□ -1.25
CSNK1D-222	ENST00000584377	RYR2	Q92736	4967 aa		7.2	□□□□□ -1.26
CSNK1D-222	ENST00000584377		A8MUU9	505 aa		7.2	□□□□□ -1.26
CSNK1D-222	ENST00000584377		Q8N1X5	172 aa		7.19	□□□□□ -1.26
CSNK1D-222	ENST00000584377	C20orf166-AS1	Q96NR2	134 aa		7.19	□□□□□ -1.26
CSNK1D-222	ENST00000584377	KMT2C	Q8NEZ4	4911 aa	Known RBP	7.16	□□□□□ -1.26
CSNK1D-222	ENST00000584377		H0YAA0	97 aa		7.14	□□□□□ -1.27
CSNK1D-222	ENST00000584377	FLG2	Q5D862	2391 aa	Predicted RBP	7.1	□□□□□ -1.27
CSNK1D-222	ENST00000584377		P0C880	135 aa		7.07	□□□□□ -1.28
CSNK1D-222	ENST00000584377	CRIPT	Q9P021	101 aa		7.05	□□□□□ -1.28
CSNK1D-222	ENST00000584377	KRTAP3-1	Q9BYR8	98 aa		7.03	□□□□□ -1.28
CSNK1D-222	ENST00000584377	LRP1	Q07954	4544 aa	Known RBP	7.02	□□□□□ -1.29
CSNK1D-222	ENST00000584377		A0A1B0GU33	70 aa		7.02	□□□□□ -1.29
CSNK1D-222	ENST00000584377		Q5VSD8	79 aa		7.01	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms