RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 LYRM7Q5U5X0 104 aa6.27□□□□□ -1.41
COPS3-218ENST00000584216 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
COPS3-218ENST00000584216 J3KT08 172 aa6.26□□□□□ -1.41
COPS3-218ENST00000584216 TMEM256-PLSCR3K7ERE1 68 aa6.26□□□□□ -1.41
COPS3-218ENST00000584216 DLEU1O43261 78 aa6.26□□□□□ -1.41
COPS3-218ENST00000584216 DSCR8Q96T75 97 aa6.25□□□□□ -1.41
COPS3-218ENST00000584216 HIST1H2BLQ99880 126 aa6.25□□□□□ -1.41
COPS3-218ENST00000584216 PRO1854Q9UHT4 67 aa6.24□□□□□ -1.41
COPS3-218ENST00000584216 TMEM238LA0A1B0GVL6 79 aa6.23□□□□□ -1.41
COPS3-218ENST00000584216 A6NJY4 79 aa6.23□□□□□ -1.41
COPS3-218ENST00000584216 NDUFB1O75438 58 aa6.23□□□□□ -1.41
COPS3-218ENST00000584216 C21orf62-AS1Q17RA5 79 aa6.23□□□□□ -1.41
COPS3-218ENST00000584216 HIST3H2BBQ8N257 126 aa6.23□□□□□ -1.41
COPS3-218ENST00000584216 A6NN06 94 aa6.22□□□□□ -1.41
COPS3-218ENST00000584216 H1FX-AS1Q4G0G2 97 aa6.22□□□□□ -1.41
COPS3-218ENST00000584216 VPS25Q9BRG1 176 aa6.22□□□□□ -1.41
COPS3-218ENST00000584216 TRIAP1O43715 76 aa6.21□□□□□ -1.42
COPS3-218ENST00000584216 HIGD1BQ9P298 99 aa6.21□□□□□ -1.42
COPS3-218ENST00000584216 UBE2V1Q13404 147 aa6.19□□□□□ -1.42
COPS3-218ENST00000584216 IGKV3D-7A0A0C4DH55 119 aa6.17□□□□□ -1.42
COPS3-218ENST00000584216 CEND1Q8N111 149 aa6.17□□□□□ -1.42
COPS3-218ENST00000584216 COX6CP09669 75 aa6.16□□□□□ -1.42
COPS3-218ENST00000584216 RBM3P98179 157 aaKnown RBP6.16□□□□□ -1.42
COPS3-218ENST00000584216 C14orf144Q96I85 54 aa6.16□□□□□ -1.42
COPS3-218ENST00000584216 PSMB2P49721 201 aa6.15□□□□□ -1.42
COPS3-218ENST00000584216 C8orf17Q9NRJ1 99 aa6.15□□□□□ -1.42
COPS3-218ENST00000584216 S100A6P06703 90 aa6.13□□□□□ -1.43
COPS3-218ENST00000584216 Q6ZVQ6 151 aa6.12□□□□□ -1.43
COPS3-218ENST00000584216 Q5VV11 94 aa6.11□□□□□ -1.43
COPS3-218ENST00000584216 Q6ZQT0 140 aa6.11□□□□□ -1.43
COPS3-218ENST00000584216 C2orf91Q6ZV80 131 aa6.11□□□□□ -1.43
COPS3-218ENST00000584216 C9JAW5 83 aa6.1□□□□□ -1.43
COPS3-218ENST00000584216 FXYD2P54710 66 aa6.1□□□□□ -1.43
COPS3-218ENST00000584216 KRTAP5-9P26371 169 aa6.09□□□□□ -1.43
COPS3-218ENST00000584216 SPATA45Q537H7 98 aa6.09□□□□□ -1.43
COPS3-218ENST00000584216 PAM16Q9Y3D7 125 aa6.09□□□□□ -1.43
COPS3-218ENST00000584216 FAM236AA0A1B0GUQ0 79 aa6.08□□□□□ -1.44
COPS3-218ENST00000584216 FAM236BA0A1B0GV22 79 aa6.08□□□□□ -1.44
COPS3-218ENST00000584216 MDN1Q9NU22 5596 aa6.06□□□□□ -1.44
COPS3-218ENST00000584216 A0A1B0GW54 56 aa6.06□□□□□ -1.44
COPS3-218ENST00000584216 MT1BP07438 61 aa6.05□□□□□ -1.44
COPS3-218ENST00000584216 VAMP8Q9BV40 100 aa6.05□□□□□ -1.44
COPS3-218ENST00000584216 S100A1P23297 94 aa6.04□□□□□ -1.44
COPS3-218ENST00000584216 KRTAP10-5P60370 271 aa6.04□□□□□ -1.44
COPS3-218ENST00000584216 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
COPS3-218ENST00000584216 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
COPS3-218ENST00000584216 KMT2DO14686 5537 aa6.03□□□□□ -1.44
COPS3-218ENST00000584216 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
COPS3-218ENST00000584216 PRR15Q8IV56 129 aa6.03□□□□□ -1.44
COPS3-218ENST00000584216 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
COPS3-218ENST00000584216 K7ERJ3 54 aa6.02□□□□□ -1.45
COPS3-218ENST00000584216 IGKV2-30P06310 120 aa6.02□□□□□ -1.45
COPS3-218ENST00000584216 NDUFS5O43920 106 aa6.01□□□□□ -1.45
COPS3-218ENST00000584216 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
COPS3-218ENST00000584216 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
COPS3-218ENST00000584216 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
COPS3-218ENST00000584216 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
COPS3-218ENST00000584216 SCGB1C2P0DMR2 95 aa6□□□□□ -1.45
COPS3-218ENST00000584216 HSD52Q0P140 79 aa6□□□□□ -1.45
COPS3-218ENST00000584216 SPRR2GQ9BYE4 73 aa6□□□□□ -1.45
COPS3-218ENST00000584216 BAALC-AS2P0C853 105 aa5.99□□□□□ -1.45
COPS3-218ENST00000584216 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
COPS3-218ENST00000584216 C5orf47Q569G3 176 aa5.98□□□□□ -1.45
COPS3-218ENST00000584216 hDV103S1A0JD37 113 aa5.97□□□□□ -1.45
COPS3-218ENST00000584216 JMJD7-PLA2G4BH0Y9G9 81 aa5.97□□□□□ -1.45
COPS3-218ENST00000584216 PDE6GP18545 87 aa5.97□□□□□ -1.45
COPS3-218ENST00000584216 LOC110117498A0A087WWA1 95 aa5.95□□□□□ -1.46
COPS3-218ENST00000584216 NREPQ16612 68 aa5.95□□□□□ -1.46
COPS3-218ENST00000584216 IMUPQ9GZP8 106 aa5.94□□□□□ -1.46
COPS3-218ENST00000584216 C4orf26Q17RF5 130 aa5.93□□□□□ -1.46
COPS3-218ENST00000584216 CSAG1Q6PB30 78 aa5.93□□□□□ -1.46
COPS3-218ENST00000584216 S4R3F8 94 aa5.91□□□□□ -1.46
COPS3-218ENST00000584216 Q5W150 140 aa5.89□□□□□ -1.47
COPS3-218ENST00000584216 K7EQZ3 153 aa5.88□□□□□ -1.47
COPS3-218ENST00000584216 KLKP1Q107X0 134 aa5.88□□□□□ -1.47
COPS3-218ENST00000584216 ATXN8Q156A1 80 aa5.88□□□□□ -1.47
COPS3-218ENST00000584216 C14orf132Q9NPU4 83 aa5.86□□□□□ -1.47
COPS3-218ENST00000584216 SPRR2EP22531 72 aa5.85□□□□□ -1.47
COPS3-218ENST00000584216 SPRR2BP35325 72 aa5.85□□□□□ -1.47
COPS3-218ENST00000584216 SPRR2AP35326 72 aa5.85□□□□□ -1.47
COPS3-218ENST00000584216 LCA10Q71F78 164 aa5.83□□□□□ -1.48
COPS3-218ENST00000584216 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
COPS3-218ENST00000584216 CXCL6P80162 114 aa5.82□□□□□ -1.48
COPS3-218ENST00000584216 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
COPS3-218ENST00000584216 HCG22E2RYF7 251 aa5.81□□□□□ -1.48
COPS3-218ENST00000584216 BPY2O14599 106 aa5.8□□□□□ -1.48
COPS3-218ENST00000584216 CASC2Q6XLA1 102 aa5.8□□□□□ -1.48
COPS3-218ENST00000584216 KRTAP2-2Q9BYT5 123 aa5.8□□□□□ -1.48
COPS3-218ENST00000584216 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
COPS3-218ENST00000584216 UQCR10Q9UDW1 63 aa5.8□□□□□ -1.48
COPS3-218ENST00000584216 C1orf64Q8NEQ6 169 aa5.79□□□□□ -1.48
COPS3-218ENST00000584216 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
COPS3-218ENST00000584216 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
COPS3-218ENST00000584216 PYY3Q5JQD4 70 aa5.73□□□□□ -1.49
COPS3-218ENST00000584216 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
COPS3-218ENST00000584216 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
COPS3-218ENST00000584216 Q8N9L7 120 aa5.7□□□□□ -1.5
COPS3-218ENST00000584216 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
COPS3-218ENST00000584216 NAA38Q9BRA0 125 aaKnown RBP5.68□□□□□ -1.5
COPS3-218ENST00000584216 M0R143 59 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms