RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TMEM256-PLSCR3K7ERE1 68 aa5.74□□□□□ -1.49
CCDC47-206ENST00000584112 DSCR10P59022 87 aa5.73□□□□□ -1.49
CCDC47-206ENST00000584112 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
CCDC47-206ENST00000584112 TRBV20-1A0A075B6N2 111 aa5.72□□□□□ -1.49
CCDC47-206ENST00000584112 PYY3Q5JQD4 70 aa5.72□□□□□ -1.49
CCDC47-206ENST00000584112 K7ERJ3 54 aa5.71□□□□□ -1.5
CCDC47-206ENST00000584112 IGKV4-1P06312 121 aa5.71□□□□□ -1.5
CCDC47-206ENST00000584112 LINC00313P59037 77 aa5.71□□□□□ -1.5
CCDC47-206ENST00000584112 A0A1B0GV72 72 aa5.7□□□□□ -1.5
CCDC47-206ENST00000584112 TRACP01848 142 aa5.69□□□□□ -1.5
CCDC47-206ENST00000584112 CCKP06307 115 aa5.69□□□□□ -1.5
CCDC47-206ENST00000584112 UBE2V1Q13404 147 aa5.69□□□□□ -1.5
CCDC47-206ENST00000584112 UQCR10Q9UDW1 63 aa5.69□□□□□ -1.5
CCDC47-206ENST00000584112 KRTAP9-3Q9BYQ3 159 aa5.68□□□□□ -1.5
CCDC47-206ENST00000584112 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
CCDC47-206ENST00000584112 MT2AP02795 61 aa5.66□□□□□ -1.5
CCDC47-206ENST00000584112 SCGB1C2P0DMR2 95 aa5.66□□□□□ -1.5
CCDC47-206ENST00000584112 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
CCDC47-206ENST00000584112 LINC00472Q9H8W2 130 aa5.66□□□□□ -1.5
CCDC47-206ENST00000584112 KRTAP16-1A8MUX0 517 aa5.65□□□□□ -1.5
CCDC47-206ENST00000584112 IGHV6-1A0A0B4J1U7 121 aa5.64□□□□□ -1.51
CCDC47-206ENST00000584112 RBM3P98179 157 aaKnown RBP5.64□□□□□ -1.51
CCDC47-206ENST00000584112 DEFB116Q30KQ4 102 aa5.64□□□□□ -1.51
CCDC47-206ENST00000584112 DSCR8Q96T75 97 aa5.64□□□□□ -1.51
CCDC47-206ENST00000584112 VPS25Q9BRG1 176 aa5.64□□□□□ -1.51
CCDC47-206ENST00000584112 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
CCDC47-206ENST00000584112 MT1FP04733 61 aa5.63□□□□□ -1.51
CCDC47-206ENST00000584112 FAM236DA0A1B0GTK5 79 aa5.62□□□□□ -1.51
CCDC47-206ENST00000584112 C8orf87E5RJ46 101 aa5.62□□□□□ -1.51
CCDC47-206ENST00000584112 FAM236CP0DP71 79 aa5.62□□□□□ -1.51
CCDC47-206ENST00000584112 NOTCH2NLQ7Z3S9 236 aa5.61□□□□□ -1.51
CCDC47-206ENST00000584112 RBM12B-AS1Q9P1G2 102 aa5.61□□□□□ -1.51
CCDC47-206ENST00000584112 A0A1B0GVX0 72 aa5.6□□□□□ -1.51
CCDC47-206ENST00000584112 BAALC-AS2P0C853 105 aa5.6□□□□□ -1.51
CCDC47-206ENST00000584112 C9JAW5 83 aa5.59□□□□□ -1.51
CCDC47-206ENST00000584112 J3KT08 172 aa5.59□□□□□ -1.51
CCDC47-206ENST00000584112 HRES1P13985 223 aa5.57□□□□□ -1.52
CCDC47-206ENST00000584112 MPLKIPQ8TAP9 179 aa5.57□□□□□ -1.52
CCDC47-206ENST00000584112 M0R143 59 aa5.56□□□□□ -1.52
CCDC47-206ENST00000584112 NDUFB1O75438 58 aa5.56□□□□□ -1.52
CCDC47-206ENST00000584112 A0A1B0GW54 56 aa5.55□□□□□ -1.52
CCDC47-206ENST00000584112 JMJD7-PLA2G4BH0Y9G9 81 aa5.55□□□□□ -1.52
CCDC47-206ENST00000584112 ATXN8Q156A1 80 aa5.55□□□□□ -1.52
CCDC47-206ENST00000584112 Q6ZQT0 140 aa5.55□□□□□ -1.52
CCDC47-206ENST00000584112 MTURNQ8N3F0 131 aa5.54□□□□□ -1.52
CCDC47-206ENST00000584112 KRTAP2-2Q9BYT5 123 aa5.54□□□□□ -1.52
CCDC47-206ENST00000584112 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
CCDC47-206ENST00000584112 ZCCHC13Q8WW36 166 aaKnown RBP5.53□□□□□ -1.52
CCDC47-206ENST00000584112 LOC110117498A0A087WWA1 95 aa5.52□□□□□ -1.53
CCDC47-206ENST00000584112 PDE6GP18545 87 aa5.52□□□□□ -1.53
CCDC47-206ENST00000584112 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
CCDC47-206ENST00000584112 LYRM7Q5U5X0 104 aa5.51□□□□□ -1.53
CCDC47-206ENST00000584112 A8MWP4 228 aa5.5□□□□□ -1.53
CCDC47-206ENST00000584112 Q8N9P0 234 aaPredicted RBP5.5□□□□□ -1.53
CCDC47-206ENST00000584112 NAA38Q9BRA0 125 aaKnown RBP5.5□□□□□ -1.53
CCDC47-206ENST00000584112 SPINK7P58062 85 aa5.49□□□□□ -1.53
CCDC47-206ENST00000584112 KRTAP5-9P26371 169 aa5.48□□□□□ -1.53
CCDC47-206ENST00000584112 C8orf17Q9NRJ1 99 aa5.48□□□□□ -1.53
CCDC47-206ENST00000584112 C14orf132Q9NPU4 83 aa5.47□□□□□ -1.53
CCDC47-206ENST00000584112 IGKV3D-7A0A0C4DH55 119 aa5.46□□□□□ -1.54
CCDC47-206ENST00000584112 SMIM6P0DI80 62 aa5.46□□□□□ -1.54
CCDC47-206ENST00000584112 NREPQ16612 68 aa5.45□□□□□ -1.54
CCDC47-206ENST00000584112 Q6ZVQ6 151 aa5.45□□□□□ -1.54
CCDC47-206ENST00000584112 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
CCDC47-206ENST00000584112 TSTD3H0UI37 97 aa5.43□□□□□ -1.54
CCDC47-206ENST00000584112 PRR15Q8IV56 129 aa5.43□□□□□ -1.54
CCDC47-206ENST00000584112 WFDC13Q8IUB5 93 aa5.42□□□□□ -1.54
CCDC47-206ENST00000584112 BATFQ16520 125 aa5.41□□□□□ -1.54
CCDC47-206ENST00000584112 TMEM254Q8TBM7 123 aa5.41□□□□□ -1.54
CCDC47-206ENST00000584112 MRPL34Q9BQ48 92 aaKnown RBP5.4□□□□□ -1.54
CCDC47-206ENST00000584112 MMP24-AS1A0A0U1RRL7 71 aa5.39□□□□□ -1.55
CCDC47-206ENST00000584112 H3BT86 120 aa5.39□□□□□ -1.55
CCDC47-206ENST00000584112 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
CCDC47-206ENST00000584112 hDV103S1A0JD37 113 aa5.37□□□□□ -1.55
CCDC47-206ENST00000584112 K7EQZ3 153 aa5.36□□□□□ -1.55
CCDC47-206ENST00000584112 NDUFS5O43920 106 aa5.36□□□□□ -1.55
CCDC47-206ENST00000584112 A0A1W2PPM0 123 aa5.35□□□□□ -1.55
CCDC47-206ENST00000584112 KRTAP4-12Q9BQ66 201 aa5.35□□□□□ -1.55
CCDC47-206ENST00000584112 BPY2O14599 106 aa5.33□□□□□ -1.56
CCDC47-206ENST00000584112 PCP4P48539 62 aa5.33□□□□□ -1.56
CCDC47-206ENST00000584112 TAX1BP3O14907 124 aa5.32□□□□□ -1.56
CCDC47-206ENST00000584112 SPRR2EP22531 72 aa5.31□□□□□ -1.56
CCDC47-206ENST00000584112 SPRR2BP35325 72 aa5.31□□□□□ -1.56
CCDC47-206ENST00000584112 SPRR2AP35326 72 aa5.31□□□□□ -1.56
CCDC47-206ENST00000584112 H1FX-AS1Q4G0G2 97 aa5.31□□□□□ -1.56
CCDC47-206ENST00000584112 C7orf65Q6ZTY9 151 aa5.3□□□□□ -1.56
CCDC47-206ENST00000584112 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
CCDC47-206ENST00000584112 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
CCDC47-206ENST00000584112 CASC2Q6XLA1 102 aa5.28□□□□□ -1.56
CCDC47-206ENST00000584112 SPCS1Q9Y6A9 102 aa5.27□□□□□ -1.57
CCDC47-206ENST00000584112 Q5W150 140 aa5.26□□□□□ -1.57
CCDC47-206ENST00000584112 HCG22E2RYF7 251 aa5.25□□□□□ -1.57
CCDC47-206ENST00000584112 Q8N9L7 120 aa5.25□□□□□ -1.57
CCDC47-206ENST00000584112 LOC105371267A0A1B0GV96 52 aa5.24□□□□□ -1.57
CCDC47-206ENST00000584112 CXCL6P80162 114 aa5.24□□□□□ -1.57
CCDC47-206ENST00000584112 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
CCDC47-206ENST00000584112 UBL5Q9BZL1 73 aa5.23□□□□□ -1.57
CCDC47-206ENST00000584112 C4orf26Q17RF5 130 aa5.19□□□□□ -1.58
CCDC47-206ENST00000584112 COL5A1-AS1Q5SY13 56 aa5.19□□□□□ -1.58
CCDC47-206ENST00000584112 A6NN06 94 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms