RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 NDUFB1O75438 58 aa4.99□□□□□ -1.61
CASC3-208ENST00000583649 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
CASC3-208ENST00000583649 IGKV3D-7A0A0C4DH55 119 aa4.98□□□□□ -1.61
CASC3-208ENST00000583649 J3KT08 172 aa4.98□□□□□ -1.61
CASC3-208ENST00000583649 KRTDAPP60985 99 aa4.98□□□□□ -1.61
CASC3-208ENST00000583649 SNRPEP62304 92 aaKnown RBP4.97□□□□□ -1.61
CASC3-208ENST00000583649 A0A1B0GX51 115 aa4.96□□□□□ -1.62
CASC3-208ENST00000583649 H3BQ85 93 aa4.96□□□□□ -1.62
CASC3-208ENST00000583649 CCKP06307 115 aa4.96□□□□□ -1.62
CASC3-208ENST00000583649 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
CASC3-208ENST00000583649 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
CASC3-208ENST00000583649 SPRR2DP22532 72 aa4.93□□□□□ -1.62
CASC3-208ENST00000583649 ATOH7Q8N100 152 aa4.92□□□□□ -1.62
CASC3-208ENST00000583649 DNAL4O96015 105 aa4.91□□□□□ -1.62
CASC3-208ENST00000583649 HIST1H4GQ99525 98 aa4.91□□□□□ -1.62
CASC3-208ENST00000583649 HSBP1L1C9JCN9 74 aa4.9□□□□□ -1.63
CASC3-208ENST00000583649 A0A1B0GV72 72 aa4.89□□□□□ -1.63
CASC3-208ENST00000583649 C5orf47Q569G3 176 aa4.89□□□□□ -1.63
CASC3-208ENST00000583649 VPS25Q9BRG1 176 aa4.89□□□□□ -1.63
CASC3-208ENST00000583649 TMEM256-PLSCR3K7ERE1 68 aa4.88□□□□□ -1.63
CASC3-208ENST00000583649 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
CASC3-208ENST00000583649 ORMDL1Q9P0S3 153 aa4.88□□□□□ -1.63
CASC3-208ENST00000583649 CSAG1Q6PB30 78 aa4.87□□□□□ -1.63
CASC3-208ENST00000583649 C2orf91Q6ZV80 131 aa4.87□□□□□ -1.63
CASC3-208ENST00000583649 KRTAP8-1Q8IUC2 63 aa4.87□□□□□ -1.63
CASC3-208ENST00000583649 HIST1H2BKO60814 126 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 HIST1H2BJP06899 126 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 HIST1H2BOP23527 126 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 HIST1H2BBP33778 126 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 HIST1H2BDP58876 126 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 HIST1H2BCP62807 126 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 HIST2H2BEQ16778 126 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.86□□□□□ -1.63
CASC3-208ENST00000583649 Q6ZVQ6 151 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 HIST1H2BHQ93079 126 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 HIST1H2BNQ99877 126 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 HIST1H2BMQ99879 126 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 C8orf17Q9NRJ1 99 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
CASC3-208ENST00000583649 KLKP1Q107X0 134 aa4.84□□□□□ -1.63
CASC3-208ENST00000583649 C7orf65Q6ZTY9 151 aa4.84□□□□□ -1.63
CASC3-208ENST00000583649 IGKV2D-30A0A075B6S6 120 aa4.83□□□□□ -1.64
CASC3-208ENST00000583649 IGKV2-30P06310 120 aa4.83□□□□□ -1.64
CASC3-208ENST00000583649 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
CASC3-208ENST00000583649 PRR15Q8IV56 129 aa4.83□□□□□ -1.64
CASC3-208ENST00000583649 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
CASC3-208ENST00000583649 A0A0B4J2C4 111 aa4.81□□□□□ -1.64
CASC3-208ENST00000583649 NDUFS5O43920 106 aa4.81□□□□□ -1.64
CASC3-208ENST00000583649 S4R3F8 94 aa4.8□□□□□ -1.64
CASC3-208ENST00000583649 RBM3P98179 157 aaKnown RBP4.79□□□□□ -1.64
CASC3-208ENST00000583649 UBE2V1Q13404 147 aa4.79□□□□□ -1.64
CASC3-208ENST00000583649 MRPL34Q9BQ48 92 aaKnown RBP4.79□□□□□ -1.64
CASC3-208ENST00000583649 C4orf26Q17RF5 130 aa4.77□□□□□ -1.65
CASC3-208ENST00000583649 TMEM254Q8TBM7 123 aa4.77□□□□□ -1.65
CASC3-208ENST00000583649 COA6Q5JTJ3 125 aaKnown RBP4.76□□□□□ -1.65
CASC3-208ENST00000583649 Q6ZQT0 140 aa4.76□□□□□ -1.65
CASC3-208ENST00000583649 PRO1854Q9UHT4 67 aa4.76□□□□□ -1.65
CASC3-208ENST00000583649 C9JAW5 83 aa4.75□□□□□ -1.65
CASC3-208ENST00000583649 COX6CP09669 75 aa4.75□□□□□ -1.65
CASC3-208ENST00000583649 LCA10Q71F78 164 aa4.74□□□□□ -1.65
CASC3-208ENST00000583649 A0A1B0GW54 56 aa4.72□□□□□ -1.65
CASC3-208ENST00000583649 TRIAP1O43715 76 aa4.72□□□□□ -1.65
CASC3-208ENST00000583649 PSMB2P49721 201 aa4.72□□□□□ -1.65
CASC3-208ENST00000583649 hDV103S1A0JD37 113 aa4.71□□□□□ -1.66
CASC3-208ENST00000583649 K7EQZ3 153 aa4.71□□□□□ -1.66
CASC3-208ENST00000583649 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
CASC3-208ENST00000583649 DLEU1O43261 78 aa4.69□□□□□ -1.66
CASC3-208ENST00000583649 COX8AP10176 69 aa4.69□□□□□ -1.66
CASC3-208ENST00000583649 MMP24-AS1A0A0U1RRL7 71 aa4.67□□□□□ -1.66
CASC3-208ENST00000583649 S100A2P29034 98 aa4.67□□□□□ -1.66
CASC3-208ENST00000583649 KRTAP12-2P59991 146 aa4.67□□□□□ -1.66
CASC3-208ENST00000583649 HIST3H2BBQ8N257 126 aa4.67□□□□□ -1.66
CASC3-208ENST00000583649 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
CASC3-208ENST00000583649 HIGD1BQ9P298 99 aa4.66□□□□□ -1.66
CASC3-208ENST00000583649 C1orf64Q8NEQ6 169 aa4.65□□□□□ -1.67
CASC3-208ENST00000583649 NREPQ16612 68 aa4.64□□□□□ -1.67
CASC3-208ENST00000583649 CEND1Q8N111 149 aa4.64□□□□□ -1.67
CASC3-208ENST00000583649 Q5W150 140 aa4.63□□□□□ -1.67
CASC3-208ENST00000583649 PDE6GP18545 87 aa4.62□□□□□ -1.67
CASC3-208ENST00000583649 PAM16Q9Y3D7 125 aa4.62□□□□□ -1.67
CASC3-208ENST00000583649 JMJD7-PLA2G4BH0Y9G9 81 aa4.6□□□□□ -1.67
CASC3-208ENST00000583649 MT1XP80297 61 aa4.6□□□□□ -1.67
CASC3-208ENST00000583649 A8MUN3 132 aa4.59□□□□□ -1.67
CASC3-208ENST00000583649 CXCL6P80162 114 aa4.59□□□□□ -1.67
CASC3-208ENST00000583649 C9orf118A6NHY6 69 aa4.58□□□□□ -1.68
CASC3-208ENST00000583649 BAALC-AS2P0C853 105 aa4.58□□□□□ -1.68
CASC3-208ENST00000583649 SCGB1C2P0DMR2 95 aa4.58□□□□□ -1.68
CASC3-208ENST00000583649 C14orf144Q96I85 54 aa4.58□□□□□ -1.68
CASC3-208ENST00000583649 HIST1H2BLQ99880 126 aa4.58□□□□□ -1.68
CASC3-208ENST00000583649 KRTAP3-1Q9BYR8 98 aa4.58□□□□□ -1.68
CASC3-208ENST00000583649 HCG22E2RYF7 251 aa4.57□□□□□ -1.68
CASC3-208ENST00000583649 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
CASC3-208ENST00000583649 LOC110117498A0A087WWA1 95 aa4.56□□□□□ -1.68
CASC3-208ENST00000583649 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
CASC3-208ENST00000583649 FXYD2P54710 66 aa4.55□□□□□ -1.68
CASC3-208ENST00000583649 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
CASC3-208ENST00000583649 CASC2Q6XLA1 102 aa4.54□□□□□ -1.68
CASC3-208ENST00000583649 H0YAA0 97 aa4.5□□□□□ -1.69
CASC3-208ENST00000583649 BPY2O14599 106 aa4.5□□□□□ -1.69
CASC3-208ENST00000583649 SPATA45Q537H7 98 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms