RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 C6orf48Q9UBA6 75 aa1.14□□□□□ -2.23
VAPA-206ENST00000583475 CDKN2A-AS1Q9UH64 79 aa1.14□□□□□ -2.23
VAPA-206ENST00000583475 RNF213Q63HN8 5207 aa1.14□□□□□ -2.23
VAPA-206ENST00000583475 TRBV20-1A0A075B6N2 111 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 A0A096LNI7 61 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 TRAV12-1A0A0B4J245 112 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 hDV103S1A0JD37 113 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 K7EMI3 77 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 CCL25O15444 150 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 CRPP02741 224 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 ANGP03950 147 aaKnown RBP1.13□□□□□ -2.23
VAPA-206ENST00000583475 BAALC-AS2P0C853 105 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 C3orf79P0CE67 100 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 MT1HL1P0DM35 61 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 SS18Q15532 418 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 C9orf116Q5BN46 136 aaPredicted RBP1.13□□□□□ -2.23
VAPA-206ENST00000583475 LINC01545Q5VT33 79 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 C2orf82Q6UX34 121 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 Q6ZQT0 140 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 C9orf163Q8N9P6 203 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 TMEM254Q8TBM7 123 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 TMEM141Q96I45 108 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 PMCHL2Q9BQD1 86 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 NAA38Q9BRA0 125 aaKnown RBP1.13□□□□□ -2.23
VAPA-206ENST00000583475 NXT2Q9NPJ8 142 aaKnown RBP1.13□□□□□ -2.23
VAPA-206ENST00000583475 MRPL35Q9NZE8 188 aaKnown RBP1.13□□□□□ -2.23
VAPA-206ENST00000583475 MUC2Q02817 5179 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 MUC17Q685J3 4493 aa1.13□□□□□ -2.23
VAPA-206ENST00000583475 A0A1W2PNM2 257 aa1.12□□□□□ -2.23
VAPA-206ENST00000583475 PCOTHQ58A44 107 aa1.12□□□□□ -2.23
VAPA-206ENST00000583475 UNQ6190/PRO20217Q6UXQ8 127 aa1.12□□□□□ -2.23
VAPA-206ENST00000583475 C5orf38Q86SI9 138 aa1.12□□□□□ -2.23
VAPA-206ENST00000583475 UBE2DNLQ8IWF7 75 aa1.12□□□□□ -2.23
VAPA-206ENST00000583475 PLAC8Q9NZF1 115 aa1.12□□□□□ -2.23
VAPA-206ENST00000583475 PSORS1C2Q9UIG4 136 aa1.12□□□□□ -2.23
VAPA-206ENST00000583475 FAT4Q6V0I7 4981 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 IGKV3OR2-268A0A0C4DH90 116 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 LOC107984156A0A0G2JMH3 177 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 F8VRH5 84 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 SYS1-DBNDD2H3BUS1 97 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 M0R143 59 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 PPP1R17O96001 155 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 SPINK8P0C7L1 97 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 PKIAP61925 76 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 ASB16-AS1Q495Z4 193 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 PYY3Q5JQD4 70 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 CASC2Q6XLA1 102 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 ARL17AQ8IVW1 177 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 Q8IZM0 81 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 IFI27L1Q96BM0 104 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 DPH3Q96FX2 82 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 C20orf166-AS1Q96NR2 134 aa1.11□□□□□ -2.23
VAPA-206ENST00000583475 TMEM262E9PQX1 116 aa1.1□□□□□ -2.23
VAPA-206ENST00000583475 CCDC179H3BU77 68 aa1.1□□□□□ -2.23
VAPA-206ENST00000583475 ERC2-IT1O76042 136 aa1.1□□□□□ -2.23
VAPA-206ENST00000583475 SPRR1AP35321 89 aa1.1□□□□□ -2.23
VAPA-206ENST00000583475 ROMO1P60602 79 aa1.1□□□□□ -2.23
VAPA-206ENST00000583475 SPAG11BQ08648 103 aa1.1□□□□□ -2.23
VAPA-206ENST00000583475 C9orf153Q5TBE3 101 aa1.1□□□□□ -2.23
VAPA-206ENST00000583475 BAGE3Q86Y29 109 aa1.1□□□□□ -2.23
VAPA-206ENST00000583475 Q9BRP9 147 aa1.1□□□□□ -2.23
VAPA-206ENST00000583475 TRBV30A0A0K0K1B3 111 aa1.09□□□□□ -2.23
VAPA-206ENST00000583475 NDUFA1O15239 70 aa1.09□□□□□ -2.23
VAPA-206ENST00000583475 SNCGO76070 127 aa1.09□□□□□ -2.23
VAPA-206ENST00000583475 LEPROTL1O95214 131 aa1.09□□□□□ -2.23
VAPA-206ENST00000583475 SMR3BP02814 79 aaPredicted RBP1.09□□□□□ -2.23
VAPA-206ENST00000583475 HSD52Q0P140 79 aa1.09□□□□□ -2.23
VAPA-206ENST00000583475 COL5A1-AS1Q5SY13 56 aa1.09□□□□□ -2.23
VAPA-206ENST00000583475 Q5VSD8 79 aa1.09□□□□□ -2.23
VAPA-206ENST00000583475 ATP11AUNQ6ZP68 121 aa1.09□□□□□ -2.23
VAPA-206ENST00000583475 COX7B2Q8TF08 81 aa1.09□□□□□ -2.23
VAPA-206ENST00000583475 SERP1Q9Y6X1 66 aa1.09□□□□□ -2.23
VAPA-206ENST00000583475 LINC01549A6NIU2 74 aa1.08□□□□□ -2.24
VAPA-206ENST00000583475 IGKCP01834 107 aa1.08□□□□□ -2.24
VAPA-206ENST00000583475 SMIM13P0DJ93 91 aa1.08□□□□□ -2.24
VAPA-206ENST00000583475 IFITM1P13164 125 aa1.08□□□□□ -2.24
VAPA-206ENST00000583475 PLNP26678 52 aa1.08□□□□□ -2.24
VAPA-206ENST00000583475 NPC2P61916 151 aa1.08□□□□□ -2.24
VAPA-206ENST00000583475 C22orf24Q9Y442 160 aa1.08□□□□□ -2.24
VAPA-206ENST00000583475 FLGP20930 4061 aaPredicted RBP1.08□□□□□ -2.24
VAPA-206ENST00000583475 A0A087WSZ3 146 aa1.07□□□□□ -2.24
VAPA-206ENST00000583475 A6NN06 94 aa1.07□□□□□ -2.24
VAPA-206ENST00000583475 COX8AP10176 69 aa1.07□□□□□ -2.24
VAPA-206ENST00000583475 KRTDAPP60985 99 aa1.07□□□□□ -2.24
VAPA-206ENST00000583475 TMEM170BQ5T4T1 132 aa1.07□□□□□ -2.24
VAPA-206ENST00000583475 LINC00308Q8TCZ7 52 aa1.07□□□□□ -2.24
VAPA-206ENST00000583475 KCNQ1DNQ9H478 68 aa1.07□□□□□ -2.24
VAPA-206ENST00000583475 PRO2289Q9P1D8 64 aa1.07□□□□□ -2.24
VAPA-206ENST00000583475 NDUFA12Q9UI09 145 aa1.07□□□□□ -2.24
VAPA-206ENST00000583475 TRBV10-3A0A0K0K1G6 114 aa1.06□□□□□ -2.24
VAPA-206ENST00000583475 MYMXA0A1B0GTQ4 84 aa1.06□□□□□ -2.24
VAPA-206ENST00000583475 F8W1H4 67 aa1.06□□□□□ -2.24
VAPA-206ENST00000583475 SEC11AP67812 179 aa1.06□□□□□ -2.24
VAPA-206ENST00000583475 COX17Q14061 63 aa1.06□□□□□ -2.24
VAPA-206ENST00000583475 LINC01600Q96MT4 127 aa1.06□□□□□ -2.24
VAPA-206ENST00000583475 TOMM7Q9P0U1 55 aa1.06□□□□□ -2.24
VAPA-206ENST00000583475 HIGD1BQ9P298 99 aa1.06□□□□□ -2.24
VAPA-206ENST00000583475 A0A0G2JQZ4 141 aa1.05□□□□□ -2.24
VAPA-206ENST00000583475 ZNF815PA8K554 130 aa1.05□□□□□ -2.24
VAPA-206ENST00000583475 H3BRM9 83 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms