RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 MTURNQ8N3F0 131 aa13.26□□□□□ -0.29
TSEN54-209ENST00000583454 DEFB116Q30KQ4 102 aa13.24□□□□□ -0.29
TSEN54-209ENST00000583454 MT1HP80294 61 aa13.22□□□□□ -0.29
TSEN54-209ENST00000583454 Q75L30 129 aa13.22□□□□□ -0.29
TSEN54-209ENST00000583454 DSCR10P59022 87 aa13.18□□□□□ -0.3
TSEN54-209ENST00000583454 C20orf166-AS1Q96NR2 134 aa13.17□□□□□ -0.3
TSEN54-209ENST00000583454 K7EP34 96 aa13.15□□□□□ -0.3
TSEN54-209ENST00000583454 SMCPP49901 116 aaPredicted RBP13.15□□□□□ -0.3
TSEN54-209ENST00000583454 LINC00313P59037 77 aa13.15□□□□□ -0.3
TSEN54-209ENST00000583454 A8MUU9 505 aa13.14□□□□□ -0.31
TSEN54-209ENST00000583454 J3KT08 172 aa13.14□□□□□ -0.31
TSEN54-209ENST00000583454 CRCT1Q9UGL9 99 aa13.12□□□□□ -0.31
TSEN54-209ENST00000583454 PRO0461Q9UI25 63 aa13.12□□□□□ -0.31
TSEN54-209ENST00000583454 NOTCH2NLQ7Z3S9 236 aa13.11□□□□□ -0.31
TSEN54-209ENST00000583454 FLGP20930 4061 aaPredicted RBP13.11□□□□□ -0.31
TSEN54-209ENST00000583454 IGHV6-1A0A0B4J1U7 121 aa13.1□□□□□ -0.31
TSEN54-209ENST00000583454 KRTAP16-1A8MUX0 517 aa13.1□□□□□ -0.31
TSEN54-209ENST00000583454 ATP11AUNQ6ZP68 121 aa13.1□□□□□ -0.31
TSEN54-209ENST00000583454 A0A1B0GVX0 72 aa13.09□□□□□ -0.31
TSEN54-209ENST00000583454 C8orf87E5RJ46 101 aa13.05□□□□□ -0.32
TSEN54-209ENST00000583454 LORP23490 312 aaPredicted RBP13.04□□□□□ -0.32
TSEN54-209ENST00000583454 NREPQ16612 68 aa13.03□□□□□ -0.32
TSEN54-209ENST00000583454 GTF2H5Q6ZYL4 71 aa13.03□□□□□ -0.32
TSEN54-209ENST00000583454 NDUFB1O75438 58 aa13□□□□□ -0.33
TSEN54-209ENST00000583454 KRTAP10-6P60371 365 aaPredicted RBP13□□□□□ -0.33
TSEN54-209ENST00000583454 A8MWP4 228 aa12.99□□□□□ -0.33
TSEN54-209ENST00000583454 IGKV3D-7A0A0C4DH55 119 aa12.95□□□□□ -0.34
TSEN54-209ENST00000583454 F8W1H4 67 aa12.93□□□□□ -0.34
TSEN54-209ENST00000583454 PRR15Q8IV56 129 aa12.91□□□□□ -0.34
TSEN54-209ENST00000583454 C8orf17Q9NRJ1 99 aa12.89□□□□□ -0.35
TSEN54-209ENST00000583454 Q6ZVQ6 151 aa12.86□□□□□ -0.35
TSEN54-209ENST00000583454 BPY2O14599 106 aa12.83□□□□□ -0.36
TSEN54-209ENST00000583454 Q8N9P0 234 aaPredicted RBP12.83□□□□□ -0.36
TSEN54-209ENST00000583454 M0R2T5 61 aa12.81□□□□□ -0.36
TSEN54-209ENST00000583454 ETDBQ3ZM63 59 aa12.81□□□□□ -0.36
TSEN54-209ENST00000583454 COX6B2Q6YFQ2 88 aa12.81□□□□□ -0.36
TSEN54-209ENST00000583454 LINC00846Q9NV44 126 aa12.8□□□□□ -0.36
TSEN54-209ENST00000583454 K7EQZ3 153 aa12.79□□□□□ -0.36
TSEN54-209ENST00000583454 MMP24-AS1A0A0U1RRL7 71 aa12.77□□□□□ -0.37
TSEN54-209ENST00000583454 ZCCHC13Q8WW36 166 aaKnown RBP12.74□□□□□ -0.37
TSEN54-209ENST00000583454 UBL5Q9BZL1 73 aa12.74□□□□□ -0.37
TSEN54-209ENST00000583454 TMEM254Q8TBM7 123 aa12.73□□□□□ -0.37
TSEN54-209ENST00000583454 MRPL34Q9BQ48 92 aaKnown RBP12.7□□□□□ -0.38
TSEN54-209ENST00000583454 hDV103S1A0JD37 113 aa12.68□□□□□ -0.38
TSEN54-209ENST00000583454 Q8N9L7 120 aa12.68□□□□□ -0.38
TSEN54-209ENST00000583454 HRES1P13985 223 aa12.6□□□□□ -0.39
TSEN54-209ENST00000583454 MPLKIPQ8TAP9 179 aa12.59□□□□□ -0.39
TSEN54-209ENST00000583454 A0A1B0GV90 55 aa12.58□□□□□ -0.4
TSEN54-209ENST00000583454 SPINK7P58062 85 aa12.56□□□□□ -0.4
TSEN54-209ENST00000583454 CASC2Q6XLA1 102 aa12.56□□□□□ -0.4
TSEN54-209ENST00000583454 WFDC13Q8IUB5 93 aa12.56□□□□□ -0.4
TSEN54-209ENST00000583454 NDUFS5O43920 106 aa12.53□□□□□ -0.4
TSEN54-209ENST00000583454 CXCL6P80162 114 aa12.53□□□□□ -0.4
TSEN54-209ENST00000583454 USH2AO75445 5202 aa12.52□□□□□ -0.41
TSEN54-209ENST00000583454 ACYP1P07311 99 aa12.52□□□□□ -0.41
TSEN54-209ENST00000583454 FAM240AA0A1B0GVK7 77 aa12.49□□□□□ -0.41
TSEN54-209ENST00000583454 KRTAP9-8Q9BYQ0 159 aa12.49□□□□□ -0.41
TSEN54-209ENST00000583454 RBM12B-AS1Q9P1G2 102 aa12.49□□□□□ -0.41
TSEN54-209ENST00000583454 HCG22E2RYF7 251 aa12.48□□□□□ -0.41
TSEN54-209ENST00000583454 SSPOA2VEC9 5147 aa12.48□□□□□ -0.41
TSEN54-209ENST00000583454 FAM236DA0A1B0GTK5 79 aa12.43□□□□□ -0.42
TSEN54-209ENST00000583454 FAM236CP0DP71 79 aa12.43□□□□□ -0.42
TSEN54-209ENST00000583454 Q5W150 140 aa12.43□□□□□ -0.42
TSEN54-209ENST00000583454 ATP5EP2Q5VTU8 51 aa12.32□□□□□ -0.44
TSEN54-209ENST00000583454 IGKV2D-30A0A075B6S6 120 aa12.28□□□□□ -0.44
TSEN54-209ENST00000583454 IGKV2-30P06310 120 aa12.28□□□□□ -0.44
TSEN54-209ENST00000583454 C7orf65Q6ZTY9 151 aa12.27□□□□□ -0.45
TSEN54-209ENST00000583454 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.26□□□□□ -0.45
TSEN54-209ENST00000583454 MT2AP02795 61 aa12.26□□□□□ -0.45
TSEN54-209ENST00000583454 TP53AIP1Q9HCN2 124 aa12.26□□□□□ -0.45
TSEN54-209ENST00000583454 LINC00643Q86TS7 51 aa12.24□□□□□ -0.45
TSEN54-209ENST00000583454 FCGBPQ9Y6R7 5405 aaPredicted RBP12.21□□□□□ -0.45
TSEN54-209ENST00000583454 KRTAP9-7A8MTY7 169 aa12.17□□□□□ -0.46
TSEN54-209ENST00000583454 MT1FP04733 61 aa12.17□□□□□ -0.46
TSEN54-209ENST00000583454 HIST1H4AP62805 103 aaKnown RBP12.17□□□□□ -0.46
TSEN54-209ENST00000583454 J3QR89 54 aa12.14□□□□□ -0.47
TSEN54-209ENST00000583454 LCE2BO14633 110 aa12.13□□□□□ -0.47
TSEN54-209ENST00000583454 KRTAP9-3Q9BYQ3 159 aa12.1□□□□□ -0.47
TSEN54-209ENST00000583454 H1FX-AS1Q4G0G2 97 aa12.08□□□□□ -0.48
TSEN54-209ENST00000583454 A0A087WVE0 104 aa12.05□□□□□ -0.48
TSEN54-209ENST00000583454 C4orf26Q17RF5 130 aa12.05□□□□□ -0.48
TSEN54-209ENST00000583454 KRTAP19-1Q8IUB9 90 aa12.02□□□□□ -0.49
TSEN54-209ENST00000583454 TRAV22A0A0B4J277 110 aa12□□□□□ -0.49
TSEN54-209ENST00000583454 KRTAP10-10P60014 251 aa12□□□□□ -0.49
TSEN54-209ENST00000583454 UQCRQO14949 82 aa11.98□□□□□ -0.49
TSEN54-209ENST00000583454 CYP4F30PQ9H0H9 118 aa11.96□□□□□ -0.49
TSEN54-209ENST00000583454 KRTAP3-1Q9BYR8 98 aa11.93□□□□□ -0.5
TSEN54-209ENST00000583454 LOC101927531A0A1B0GV80 90 aa11.91□□□□□ -0.5
TSEN54-209ENST00000583454 C1orf64Q8NEQ6 169 aa11.88□□□□□ -0.51
TSEN54-209ENST00000583454 H0Y9P7 68 aa11.87□□□□□ -0.51
TSEN54-209ENST00000583454 ATOX1O00244 68 aa11.87□□□□□ -0.51
TSEN54-209ENST00000583454 K7ERU9 68 aa11.85□□□□□ -0.51
TSEN54-209ENST00000583454 OCR1Q9BZK8 76 aa11.85□□□□□ -0.51
TSEN54-209ENST00000583454 MACF1Q9UPN3 7388 aaKnown RBP11.83□□□□□ -0.52
TSEN54-209ENST00000583454 SYNE2Q8WXH0 6885 aaKnown RBP11.75□□□□□ -0.53
TSEN54-209ENST00000583454 IMUPQ9GZP8 106 aa11.75□□□□□ -0.53
TSEN54-209ENST00000583454 KRTAP19-6Q3LI70 58 aa11.73□□□□□ -0.53
TSEN54-209ENST00000583454 LINC00208Q96KT6 92 aa11.72□□□□□ -0.53
TSEN54-209ENST00000583454 S4R3F8 94 aa11.72□□□□□ -0.53
TSEN54-209ENST00000583454 MT-ATP8P03928 68 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms