RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SS18L2Q9UHA2 77 aa6.44□□□□□ -1.38
TOP3A-215ENST00000583328 CCKP06307 115 aa6.43□□□□□ -1.38
TOP3A-215ENST00000583328 A0A087WSZ3 146 aa6.42□□□□□ -1.38
TOP3A-215ENST00000583328 GTF2H5Q6ZYL4 71 aa6.42□□□□□ -1.38
TOP3A-215ENST00000583328 OBSCN-AS1Q96MR7 158 aa6.42□□□□□ -1.38
TOP3A-215ENST00000583328 LOC110117498A0A087WWA1 95 aa6.41□□□□□ -1.38
TOP3A-215ENST00000583328 FCGBPQ9Y6R7 5405 aaPredicted RBP6.4□□□□□ -1.38
TOP3A-215ENST00000583328 PDE6GP18545 87 aa6.4□□□□□ -1.38
TOP3A-215ENST00000583328 VPS25Q9BRG1 176 aa6.4□□□□□ -1.38
TOP3A-215ENST00000583328 KRTAP9-8Q9BYQ0 159 aa6.4□□□□□ -1.38
TOP3A-215ENST00000583328 C21orf62-AS1Q17RA5 79 aa6.39□□□□□ -1.39
TOP3A-215ENST00000583328 Q6ZQT0 140 aa6.39□□□□□ -1.39
TOP3A-215ENST00000583328 C14orf132Q9NPU4 83 aa6.39□□□□□ -1.39
TOP3A-215ENST00000583328 PRO0461Q9UI25 63 aa6.39□□□□□ -1.39
TOP3A-215ENST00000583328 SMCPP49901 116 aaPredicted RBP6.38□□□□□ -1.39
TOP3A-215ENST00000583328 ATP11AUNQ6ZP68 121 aa6.37□□□□□ -1.39
TOP3A-215ENST00000583328 A0A1B0GW54 56 aa6.36□□□□□ -1.39
TOP3A-215ENST00000583328 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
TOP3A-215ENST00000583328 F8W1H4 67 aa6.34□□□□□ -1.39
TOP3A-215ENST00000583328 Q96NJ1 140 aa6.34□□□□□ -1.39
TOP3A-215ENST00000583328 LINC00472Q9H8W2 130 aa6.31□□□□□ -1.4
TOP3A-215ENST00000583328 SYNE2Q8WXH0 6885 aaKnown RBP6.31□□□□□ -1.4
TOP3A-215ENST00000583328 Q75L30 129 aa6.3□□□□□ -1.4
TOP3A-215ENST00000583328 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
TOP3A-215ENST00000583328 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
TOP3A-215ENST00000583328 SIGMAR1Q99720 223 aa6.29□□□□□ -1.4
TOP3A-215ENST00000583328 A0A1B0GV90 55 aa6.28□□□□□ -1.4
TOP3A-215ENST00000583328 LCE2BO14633 110 aa6.27□□□□□ -1.41
TOP3A-215ENST00000583328 MT2AP02795 61 aa6.27□□□□□ -1.41
TOP3A-215ENST00000583328 ETDBQ3ZM63 59 aa6.27□□□□□ -1.41
TOP3A-215ENST00000583328 J3KT08 172 aa6.26□□□□□ -1.41
TOP3A-215ENST00000583328 DEFB116Q30KQ4 102 aa6.26□□□□□ -1.41
TOP3A-215ENST00000583328 NREPQ16612 68 aa6.24□□□□□ -1.41
TOP3A-215ENST00000583328 LINC00846Q9NV44 126 aa6.23□□□□□ -1.41
TOP3A-215ENST00000583328 MT1FP04733 61 aa6.22□□□□□ -1.41
TOP3A-215ENST00000583328 KRTAP10-10P60014 251 aa6.22□□□□□ -1.41
TOP3A-215ENST00000583328 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
TOP3A-215ENST00000583328 A0A1B0GVX0 72 aa6.21□□□□□ -1.42
TOP3A-215ENST00000583328 IGHV6-1A0A0B4J1U7 121 aa6.19□□□□□ -1.42
TOP3A-215ENST00000583328 NDUFB1O75438 58 aa6.19□□□□□ -1.42
TOP3A-215ENST00000583328 DSCR10P59022 87 aa6.19□□□□□ -1.42
TOP3A-215ENST00000583328 LINC00313P59037 77 aa6.19□□□□□ -1.42
TOP3A-215ENST00000583328 Q6ZVQ6 151 aa6.19□□□□□ -1.42
TOP3A-215ENST00000583328 FAM236DA0A1B0GTK5 79 aa6.18□□□□□ -1.42
TOP3A-215ENST00000583328 A8MWP4 228 aa6.18□□□□□ -1.42
TOP3A-215ENST00000583328 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
TOP3A-215ENST00000583328 FAM236CP0DP71 79 aa6.18□□□□□ -1.42
TOP3A-215ENST00000583328 UBL5Q9BZL1 73 aa6.17□□□□□ -1.42
TOP3A-215ENST00000583328 BPY2O14599 106 aa6.16□□□□□ -1.42
TOP3A-215ENST00000583328 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
TOP3A-215ENST00000583328 IGKV3D-7A0A0C4DH55 119 aa6.15□□□□□ -1.42
TOP3A-215ENST00000583328 A8MUU9 505 aa6.15□□□□□ -1.42
TOP3A-215ENST00000583328 KRTAP16-1A8MUX0 517 aa6.15□□□□□ -1.42
TOP3A-215ENST00000583328 NOTCH2NLQ7Z3S9 236 aa6.15□□□□□ -1.42
TOP3A-215ENST00000583328 PRR15Q8IV56 129 aa6.14□□□□□ -1.43
TOP3A-215ENST00000583328 ACYP1P07311 99 aa6.13□□□□□ -1.43
TOP3A-215ENST00000583328 FAM240AA0A1B0GVK7 77 aa6.12□□□□□ -1.43
TOP3A-215ENST00000583328 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
TOP3A-215ENST00000583328 C8orf17Q9NRJ1 99 aa6.12□□□□□ -1.43
TOP3A-215ENST00000583328 K7EQZ3 153 aa6.11□□□□□ -1.43
TOP3A-215ENST00000583328 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
TOP3A-215ENST00000583328 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
TOP3A-215ENST00000583328 MMP24-AS1A0A0U1RRL7 71 aa6.08□□□□□ -1.44
TOP3A-215ENST00000583328 CXCL6P80162 114 aa6.07□□□□□ -1.44
TOP3A-215ENST00000583328 Q8N9L7 120 aa6.07□□□□□ -1.44
TOP3A-215ENST00000583328 Q8N9P0 234 aaPredicted RBP6.06□□□□□ -1.44
TOP3A-215ENST00000583328 TMEM254Q8TBM7 123 aa6.06□□□□□ -1.44
TOP3A-215ENST00000583328 hDV103S1A0JD37 113 aa6.05□□□□□ -1.44
TOP3A-215ENST00000583328 J3QR89 54 aa6.05□□□□□ -1.44
TOP3A-215ENST00000583328 HRES1P13985 223 aa6.04□□□□□ -1.44
TOP3A-215ENST00000583328 MPLKIPQ8TAP9 179 aa6.04□□□□□ -1.44
TOP3A-215ENST00000583328 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
TOP3A-215ENST00000583328 ATP5EP2Q5VTU8 51 aa6.02□□□□□ -1.45
TOP3A-215ENST00000583328 CASC2Q6XLA1 102 aa6.01□□□□□ -1.45
TOP3A-215ENST00000583328 WFDC13Q8IUB5 93 aa6.01□□□□□ -1.45
TOP3A-215ENST00000583328 HCG22E2RYF7 251 aa6□□□□□ -1.45
TOP3A-215ENST00000583328 ZCCHC13Q8WW36 166 aaKnown RBP6□□□□□ -1.45
TOP3A-215ENST00000583328 LINC00643Q86TS7 51 aa5.99□□□□□ -1.45
TOP3A-215ENST00000583328 NEBP20929 6669 aa5.98□□□□□ -1.45
TOP3A-215ENST00000583328 NDUFS5O43920 106 aa5.97□□□□□ -1.45
TOP3A-215ENST00000583328 K7ERU9 68 aa5.94□□□□□ -1.46
TOP3A-215ENST00000583328 HIST1H4AP62805 103 aaKnown RBP5.93□□□□□ -1.46
TOP3A-215ENST00000583328 SPINK7P58062 85 aa5.88□□□□□ -1.47
TOP3A-215ENST00000583328 Q5W150 140 aa5.88□□□□□ -1.47
TOP3A-215ENST00000583328 TP53AIP1Q9HCN2 124 aa5.88□□□□□ -1.47
TOP3A-215ENST00000583328 A0A087WVE0 104 aa5.86□□□□□ -1.47
TOP3A-215ENST00000583328 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
TOP3A-215ENST00000583328 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
TOP3A-215ENST00000583328 MUC12Q9UKN1 5478 aa5.81□□□□□ -1.48
TOP3A-215ENST00000583328 IGKV2D-30A0A075B6S6 120 aa5.81□□□□□ -1.48
TOP3A-215ENST00000583328 IGKV2-30P06310 120 aa5.81□□□□□ -1.48
TOP3A-215ENST00000583328 IMUPQ9GZP8 106 aa5.8□□□□□ -1.48
TOP3A-215ENST00000583328 MT-ATP8P03928 68 aa5.79□□□□□ -1.48
TOP3A-215ENST00000583328 TRAV22A0A0B4J277 110 aa5.78□□□□□ -1.48
TOP3A-215ENST00000583328 UQCRQO14949 82 aa5.78□□□□□ -1.48
TOP3A-215ENST00000583328 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
TOP3A-215ENST00000583328 A6NN06 94 aa5.73□□□□□ -1.49
TOP3A-215ENST00000583328 ATOX1O00244 68 aa5.73□□□□□ -1.49
TOP3A-215ENST00000583328 LOC101927531A0A1B0GV80 90 aa5.72□□□□□ -1.49
TOP3A-215ENST00000583328 H0Y9P7 68 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms