RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 A0A087WSZ3 146 aa7.17□□□□□ -1.26
SS18-222ENST00000582792 A0A1B0GV72 72 aa7.17□□□□□ -1.26
SS18-222ENST00000582792 A0A1B0GW54 56 aa7.17□□□□□ -1.26
SS18-222ENST00000582792 GTF2H5Q6ZYL4 71 aa7.16□□□□□ -1.26
SS18-222ENST00000582792 Q6ZQT0 140 aa7.15□□□□□ -1.26
SS18-222ENST00000582792 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
SS18-222ENST00000582792 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.13□□□□□ -1.27
SS18-222ENST00000582792 PRO0461Q9UI25 63 aa7.13□□□□□ -1.27
SS18-222ENST00000582792 MTURNQ8N3F0 131 aa7.12□□□□□ -1.27
SS18-222ENST00000582792 LCE2BO14633 110 aa7.11□□□□□ -1.27
SS18-222ENST00000582792 SMCPP49901 116 aaPredicted RBP7.11□□□□□ -1.27
SS18-222ENST00000582792 C14orf132Q9NPU4 83 aa7.11□□□□□ -1.27
SS18-222ENST00000582792 Q96NJ1 140 aa7.1□□□□□ -1.27
SS18-222ENST00000582792 VPS25Q9BRG1 176 aa7.1□□□□□ -1.27
SS18-222ENST00000582792 F8W1H4 67 aa7.09□□□□□ -1.27
SS18-222ENST00000582792 SSPOA2VEC9 5147 aa7.08□□□□□ -1.28
SS18-222ENST00000582792 LINC00472Q9H8W2 130 aa7.08□□□□□ -1.28
SS18-222ENST00000582792 USH2AO75445 5202 aa7.08□□□□□ -1.28
SS18-222ENST00000582792 J3KT08 172 aa7.04□□□□□ -1.28
SS18-222ENST00000582792 IGKV4-1P06312 121 aa7.02□□□□□ -1.29
SS18-222ENST00000582792 ATP11AUNQ6ZP68 121 aa7.01□□□□□ -1.29
SS18-222ENST00000582792 SIGMAR1Q99720 223 aa7.01□□□□□ -1.29
SS18-222ENST00000582792 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
SS18-222ENST00000582792 Q75L30 129 aa7□□□□□ -1.29
SS18-222ENST00000582792 NREPQ16612 68 aa6.99□□□□□ -1.29
SS18-222ENST00000582792 DEFB116Q30KQ4 102 aa6.97□□□□□ -1.29
SS18-222ENST00000582792 ETDBQ3ZM63 59 aa6.97□□□□□ -1.29
SS18-222ENST00000582792 FCGBPQ9Y6R7 5405 aaPredicted RBP6.96□□□□□ -1.3
SS18-222ENST00000582792 A0A1B0GV90 55 aa6.95□□□□□ -1.3
SS18-222ENST00000582792 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
SS18-222ENST00000582792 C8orf87E5RJ46 101 aa6.95□□□□□ -1.3
SS18-222ENST00000582792 NDUFB1O75438 58 aa6.94□□□□□ -1.3
SS18-222ENST00000582792 LINC00313P59037 77 aa6.94□□□□□ -1.3
SS18-222ENST00000582792 A8MWP4 228 aa6.93□□□□□ -1.3
SS18-222ENST00000582792 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
SS18-222ENST00000582792 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
SS18-222ENST00000582792 A8MUU9 505 aa6.91□□□□□ -1.3
SS18-222ENST00000582792 DSCR10P59022 87 aa6.91□□□□□ -1.3
SS18-222ENST00000582792 Q6ZVQ6 151 aa6.91□□□□□ -1.3
SS18-222ENST00000582792 UBL5Q9BZL1 73 aa6.9□□□□□ -1.3
SS18-222ENST00000582792 KRTAP16-1A8MUX0 517 aa6.89□□□□□ -1.31
SS18-222ENST00000582792 LINC00846Q9NV44 126 aa6.89□□□□□ -1.31
SS18-222ENST00000582792 IGKV3D-7A0A0C4DH55 119 aa6.88□□□□□ -1.31
SS18-222ENST00000582792 BPY2O14599 106 aa6.88□□□□□ -1.31
SS18-222ENST00000582792 PRR15Q8IV56 129 aa6.88□□□□□ -1.31
SS18-222ENST00000582792 MT2AP02795 61 aa6.87□□□□□ -1.31
SS18-222ENST00000582792 ACYP1P07311 99 aa6.87□□□□□ -1.31
SS18-222ENST00000582792 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
SS18-222ENST00000582792 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
SS18-222ENST00000582792 FAM240AA0A1B0GVK7 77 aa6.85□□□□□ -1.31
SS18-222ENST00000582792 C8orf17Q9NRJ1 99 aa6.85□□□□□ -1.31
SS18-222ENST00000582792 MT1FP04733 61 aa6.82□□□□□ -1.32
SS18-222ENST00000582792 K7EQZ3 153 aa6.81□□□□□ -1.32
SS18-222ENST00000582792 Q8N9P0 234 aaPredicted RBP6.81□□□□□ -1.32
SS18-222ENST00000582792 MMP24-AS1A0A0U1RRL7 71 aa6.8□□□□□ -1.32
SS18-222ENST00000582792 CXCL6P80162 114 aa6.8□□□□□ -1.32
SS18-222ENST00000582792 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
SS18-222ENST00000582792 TMEM254Q8TBM7 123 aa6.79□□□□□ -1.32
SS18-222ENST00000582792 FAM236DA0A1B0GTK5 79 aa6.77□□□□□ -1.33
SS18-222ENST00000582792 FAM236CP0DP71 79 aa6.77□□□□□ -1.33
SS18-222ENST00000582792 MACF1Q9UPN3 7388 aaKnown RBP6.76□□□□□ -1.33
SS18-222ENST00000582792 hDV103S1A0JD37 113 aa6.76□□□□□ -1.33
SS18-222ENST00000582792 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
SS18-222ENST00000582792 MRPL34Q9BQ48 92 aaKnown RBP6.76□□□□□ -1.33
SS18-222ENST00000582792 SYNE2Q8WXH0 6885 aaKnown RBP6.74□□□□□ -1.33
SS18-222ENST00000582792 J3QR89 54 aa6.74□□□□□ -1.33
SS18-222ENST00000582792 ATP5EP2Q5VTU8 51 aa6.74□□□□□ -1.33
SS18-222ENST00000582792 Q8N9L7 120 aa6.73□□□□□ -1.33
SS18-222ENST00000582792 MPLKIPQ8TAP9 179 aa6.73□□□□□ -1.33
SS18-222ENST00000582792 ZCCHC13Q8WW36 166 aaKnown RBP6.72□□□□□ -1.33
SS18-222ENST00000582792 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
SS18-222ENST00000582792 CASC2Q6XLA1 102 aa6.71□□□□□ -1.34
SS18-222ENST00000582792 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
SS18-222ENST00000582792 HRES1P13985 223 aa6.7□□□□□ -1.34
SS18-222ENST00000582792 LINC00643Q86TS7 51 aa6.69□□□□□ -1.34
SS18-222ENST00000582792 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
SS18-222ENST00000582792 WFDC13Q8IUB5 93 aa6.67□□□□□ -1.34
SS18-222ENST00000582792 NDUFS5O43920 106 aa6.65□□□□□ -1.34
SS18-222ENST00000582792 K7ERU9 68 aa6.6□□□□□ -1.35
SS18-222ENST00000582792 TP53AIP1Q9HCN2 124 aa6.6□□□□□ -1.35
SS18-222ENST00000582792 SPINK7P58062 85 aa6.59□□□□□ -1.35
SS18-222ENST00000582792 HIST1H4AP62805 103 aaKnown RBP6.58□□□□□ -1.36
SS18-222ENST00000582792 Q5W150 140 aa6.57□□□□□ -1.36
SS18-222ENST00000582792 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
SS18-222ENST00000582792 C7orf65Q6ZTY9 151 aa6.52□□□□□ -1.37
SS18-222ENST00000582792 A0A087WVE0 104 aa6.5□□□□□ -1.37
SS18-222ENST00000582792 IMUPQ9GZP8 106 aa6.5□□□□□ -1.37
SS18-222ENST00000582792 UQCRQO14949 82 aa6.48□□□□□ -1.37
SS18-222ENST00000582792 IGKV2D-30A0A075B6S6 120 aa6.47□□□□□ -1.37
SS18-222ENST00000582792 IGKV2-30P06310 120 aa6.47□□□□□ -1.37
SS18-222ENST00000582792 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
SS18-222ENST00000582792 ATOX1O00244 68 aa6.42□□□□□ -1.38
SS18-222ENST00000582792 MT-ATP8P03928 68 aa6.42□□□□□ -1.38
SS18-222ENST00000582792 LOC101927531A0A1B0GV80 90 aa6.41□□□□□ -1.38
SS18-222ENST00000582792 OCR1Q9BZK8 76 aa6.41□□□□□ -1.38
SS18-222ENST00000582792 H0Y9P7 68 aa6.38□□□□□ -1.39
SS18-222ENST00000582792 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
SS18-222ENST00000582792 SCGB1A1P11684 91 aa6.36□□□□□ -1.39
SS18-222ENST00000582792 C5orf47Q569G3 176 aa6.36□□□□□ -1.39
SS18-222ENST00000582792 NEBP20929 6669 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms