RNA–Protein interactions for RNA: ENST00000580813.1

VNN3-214, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 558 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-214ENST00000580813 PKD1L1Q8TDX9 2849 aa0.35□□□□□ -2.35
VNN3-214ENST00000580813 LRP1Q07954 4544 aaKnown RBP0.34□□□□□ -2.35
VNN3-214ENST00000580813 ACANP16112 2415 aa0.34□□□□□ -2.36
VNN3-214ENST00000580813 PTPN13Q12923 2485 aa0.33□□□□□ -2.36
VNN3-214ENST00000580813 SNRPGP62308 76 aaKnown RBP0.33□□□□□ -2.36
VNN3-214ENST00000580813 KMT2DO14686 5537 aa0.33□□□□□ -2.36
VNN3-214ENST00000580813 WNK1Q9H4A3 2382 aa0.33□□□□□ -2.36
VNN3-214ENST00000580813 H3BUA1 57 aa0.32□□□□□ -2.36
VNN3-214ENST00000580813 GCN1Q92616 2671 aaKnown RBP0.32□□□□□ -2.36
VNN3-214ENST00000580813 HRNRQ86YZ3 2850 aaPredicted RBP0.32□□□□□ -2.36
VNN3-214ENST00000580813 DUOX1Q9NRD9 1551 aa0.32□□□□□ -2.36
VNN3-214ENST00000580813 CLTCL1P53675 1640 aa0.31□□□□□ -2.36
VNN3-214ENST00000580813 HUWE1Q7Z6Z7 4374 aaKnown RBP0.31□□□□□ -2.36
VNN3-214ENST00000580813 DMBT1Q9UGM3 2413 aaPredicted RBP0.31□□□□□ -2.36
VNN3-214ENST00000580813 MYCBP2O75592 4640 aa0.3□□□□□ -2.36
VNN3-214ENST00000580813 SRRM2Q9UQ35 2752 aaKnown RBP0.3□□□□□ -2.36
VNN3-214ENST00000580813 RPL39P62891 51 aaKnown RBP0.3□□□□□ -2.36
VNN3-214ENST00000580813 MROH2BQ7Z745 1585 aa0.3□□□□□ -2.36
VNN3-214ENST00000580813 DNAH11Q96DT5 4516 aa0.3□□□□□ -2.36
VNN3-214ENST00000580813 MAST4O15021 2626 aa0.3□□□□□ -2.36
VNN3-214ENST00000580813 VPS13BQ7Z7G8 4022 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 FAT4Q6V0I7 4981 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 SETD2Q9BYW2 2564 aaPredicted RBP0.29□□□□□ -2.36
VNN3-214ENST00000580813 KMT2AQ03164 3969 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 APC2O95996 2303 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 FLNCQ14315 2725 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 A8MTW9 85 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 H0YGG7 62 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 SPRR2DP22532 72 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 KRTAP6-2Q3LI66 62 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 NF1P21359 2839 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
VNN3-214ENST00000580813 FLNBO75369 2602 aaKnown RBP0.28□□□□□ -2.36
VNN3-214ENST00000580813 CUBNO60494 3623 aa0.28□□□□□ -2.36
VNN3-214ENST00000580813 H3BNG1 76 aa0.28□□□□□ -2.36
VNN3-214ENST00000580813 CLPSL2Q6UWE3 100 aa0.28□□□□□ -2.36
VNN3-214ENST00000580813 ANKHD1Q8IWZ3 2542 aaKnown RBP0.27□□□□□ -2.37
VNN3-214ENST00000580813 POLR2KP53803 58 aaKnown RBP0.27□□□□□ -2.37
VNN3-214ENST00000580813 LEAP2Q969E1 77 aa0.27□□□□□ -2.37
VNN3-214ENST00000580813 RPL39LQ96EH5 51 aaKnown RBP0.27□□□□□ -2.37
VNN3-214ENST00000580813 DMXL1Q9Y485 3027 aa0.27□□□□□ -2.37
VNN3-214ENST00000580813 LPAP08519 4548 aa0.27□□□□□ -2.37
VNN3-214ENST00000580813 SACSQ9NZJ4 4579 aa0.26□□□□□ -2.37
VNN3-214ENST00000580813 SONP18583 2426 aaKnown RBP0.26□□□□□ -2.37
VNN3-214ENST00000580813 SPTBN4Q9H254 2564 aa0.26□□□□□ -2.37
VNN3-214ENST00000580813 PKD1P98161 4303 aa0.26□□□□□ -2.37
VNN3-214ENST00000580813 DEFB131AP59861 70 aa0.26□□□□□ -2.37
VNN3-214ENST00000580813 FASNP49327 2511 aaKnown RBP0.26□□□□□ -2.37
VNN3-214ENST00000580813 HSPG2P98160 4391 aa0.26□□□□□ -2.37
VNN3-214ENST00000580813 NBEAL2Q6ZNJ1 2754 aa0.25□□□□□ -2.37
VNN3-214ENST00000580813 TENM2Q9NT68 2774 aa0.25□□□□□ -2.37
VNN3-214ENST00000580813 RIF1Q5UIP0 2472 aaKnown RBP0.25□□□□□ -2.37
VNN3-214ENST00000580813 SPG11Q96JI7 2443 aa0.25□□□□□ -2.37
VNN3-214ENST00000580813 DNAH9Q9NYC9 4486 aa0.25□□□□□ -2.37
VNN3-214ENST00000580813 M0QY20 66 aa0.25□□□□□ -2.37
VNN3-214ENST00000580813 TEP1Q99973 2627 aaKnown RBP0.25□□□□□ -2.37
VNN3-214ENST00000580813 COL7A1Q02388 2944 aa0.24□□□□□ -2.37
VNN3-214ENST00000580813 NOP10Q9NPE3 64 aaKnown RBP0.24□□□□□ -2.37
VNN3-214ENST00000580813 IGSF10Q6WRI0 2623 aa0.24□□□□□ -2.37
VNN3-214ENST00000580813 ZZEF1O43149 2961 aa0.24□□□□□ -2.37
VNN3-214ENST00000580813 TACC2O95359 2948 aa0.24□□□□□ -2.37
VNN3-214ENST00000580813 LRRK2Q5S007 2527 aa0.23□□□□□ -2.37
VNN3-214ENST00000580813 ACACAQ13085 2346 aa0.23□□□□□ -2.37
VNN3-214ENST00000580813 APOBP04114 4563 aaKnown RBP0.23□□□□□ -2.37
VNN3-214ENST00000580813 HECTD4Q9Y4D8 3996 aa0.22□□□□□ -2.37
VNN3-214ENST00000580813 MTORP42345 2549 aa0.22□□□□□ -2.37
VNN3-214ENST00000580813 SPRR2BP35325 72 aa0.22□□□□□ -2.37
VNN3-214ENST00000580813 DEFB104AQ8WTQ1 72 aa0.22□□□□□ -2.37
VNN3-214ENST00000580813 COL6A5A8TX70 2615 aa0.22□□□□□ -2.37
VNN3-214ENST00000580813 ANK3Q12955 4377 aaKnown RBP0.22□□□□□ -2.37
VNN3-214ENST00000580813 HMCN2Q8NDA2 5059 aa0.22□□□□□ -2.37
VNN3-214ENST00000580813 SVEP1Q4LDE5 3571 aa0.22□□□□□ -2.37
VNN3-214ENST00000580813 LRP1BQ9NZR2 4599 aa0.22□□□□□ -2.37
VNN3-214ENST00000580813 UTP20O75691 2785 aaKnown RBP0.22□□□□□ -2.37
VNN3-214ENST00000580813 MYO18BQ8IUG5 2567 aa0.21□□□□□ -2.38
VNN3-214ENST00000580813 HIVEP1P15822 2718 aa0.21□□□□□ -2.38
VNN3-214ENST00000580813 DEFB110Q30KQ9 67 aa0.21□□□□□ -2.38
VNN3-214ENST00000580813 DCHS2Q6V1P9 2916 aa0.21□□□□□ -2.38
VNN3-214ENST00000580813 PKHD1L1Q86WI1 4243 aa0.21□□□□□ -2.38
VNN3-214ENST00000580813 EPG5Q9HCE0 2579 aa0.21□□□□□ -2.38
VNN3-214ENST00000580813 DNAH2Q9P225 4427 aa0.2□□□□□ -2.38
VNN3-214ENST00000580813 SSPOA2VEC9 5147 aa0.2□□□□□ -2.38
VNN3-214ENST00000580813 VPS13DQ5THJ4 4388 aa0.2□□□□□ -2.38
VNN3-214ENST00000580813 GCC2Q8IWJ2 1684 aa0.2□□□□□ -2.38
VNN3-214ENST00000580813 RANBP2P49792 3224 aaKnown RBP0.2□□□□□ -2.38
VNN3-214ENST00000580813 ACACBO00763 2458 aa0.2□□□□□ -2.38
VNN3-214ENST00000580813 CCDC168Q8NDH2 2452 aa0.2□□□□□ -2.38
VNN3-214ENST00000580813 PKHD1P08F94 4074 aa0.19□□□□□ -2.38
VNN3-214ENST00000580813 USP9YO00507 2555 aaPredicted RBP0.19□□□□□ -2.38
VNN3-214ENST00000580813 COL6A3P12111 3177 aa0.19□□□□□ -2.38
VNN3-214ENST00000580813 A0A0C4DFX4 3053 aa0.19□□□□□ -2.38
VNN3-214ENST00000580813 C9orf92A6NGG3 77 aa0.19□□□□□ -2.38
VNN3-214ENST00000580813 ANKRD11Q6UB99 2663 aaPredicted RBP0.19□□□□□ -2.38
VNN3-214ENST00000580813 DNAH3Q8TD57 4116 aa0.18□□□□□ -2.38
VNN3-214ENST00000580813 CRYBG3Q68DQ2 2970 aa0.18□□□□□ -2.38
VNN3-214ENST00000580813 MAP1AP78559 2803 aaPredicted RBP0.17□□□□□ -2.38
VNN3-214ENST00000580813 KALRNO60229 2985 aa0.17□□□□□ -2.38
VNN3-214ENST00000580813 M0QZ58 72 aa0.17□□□□□ -2.38
VNN3-214ENST00000580813 TNP1P09430 55 aa0.17□□□□□ -2.38
VNN3-214ENST00000580813 TOMM7Q9P0U1 55 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms