RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 IGLV8-61A0A075B6I0 122 aa6.04□□□□□ -1.44
TOP3A-210ENST00000580713 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
TOP3A-210ENST00000580713 DSCR8Q96T75 97 aa6.04□□□□□ -1.44
TOP3A-210ENST00000580713 C14orf132Q9NPU4 83 aa6.04□□□□□ -1.44
TOP3A-210ENST00000580713 Q8NBF4 154 aa6.03□□□□□ -1.44
TOP3A-210ENST00000580713 TRBV7-4A0A0J9YYF1 115 aa6.02□□□□□ -1.45
TOP3A-210ENST00000580713 MT1HP80294 61 aa6.02□□□□□ -1.45
TOP3A-210ENST00000580713 MOBPQ13875 183 aa6.02□□□□□ -1.45
TOP3A-210ENST00000580713 Q6JHZ5 121 aa6.02□□□□□ -1.45
TOP3A-210ENST00000580713 LOC110117498A0A087WWA1 95 aa6.01□□□□□ -1.45
TOP3A-210ENST00000580713 PDE6GP18545 87 aa6.01□□□□□ -1.45
TOP3A-210ENST00000580713 IGFL1Q6UW32 110 aa6.01□□□□□ -1.45
TOP3A-210ENST00000580713 Q6ZQT0 140 aa6□□□□□ -1.45
TOP3A-210ENST00000580713 SSBP3-AS1Q7Z2R9 100 aa5.99□□□□□ -1.45
TOP3A-210ENST00000580713 A0A0G2JQZ4 141 aa5.98□□□□□ -1.45
TOP3A-210ENST00000580713 CCKP06307 115 aa5.98□□□□□ -1.45
TOP3A-210ENST00000580713 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
TOP3A-210ENST00000580713 VPS25Q9BRG1 176 aa5.98□□□□□ -1.45
TOP3A-210ENST00000580713 J3QR89 54 aa5.97□□□□□ -1.45
TOP3A-210ENST00000580713 A0A1W2PNM2 257 aa5.96□□□□□ -1.46
TOP3A-210ENST00000580713 M0R2T5 61 aa5.96□□□□□ -1.46
TOP3A-210ENST00000580713 KRTAP19-2Q3LHN2 52 aa5.95□□□□□ -1.46
TOP3A-210ENST00000580713 K7ERU9 68 aa5.94□□□□□ -1.46
TOP3A-210ENST00000580713 Q6Q795 121 aa5.94□□□□□ -1.46
TOP3A-210ENST00000580713 HRCT1Q6UXD1 115 aa5.94□□□□□ -1.46
TOP3A-210ENST00000580713 A0A1B0GW54 56 aa5.93□□□□□ -1.46
TOP3A-210ENST00000580713 SPINK1P00995 79 aa5.93□□□□□ -1.46
TOP3A-210ENST00000580713 CD164Q04900 197 aa5.93□□□□□ -1.46
TOP3A-210ENST00000580713 TRBV7-7A0A0K0K1E9 115 aa5.92□□□□□ -1.46
TOP3A-210ENST00000580713 FAM240AA0A1B0GVK7 77 aa5.92□□□□□ -1.46
TOP3A-210ENST00000580713 ACYP1P07311 99 aa5.92□□□□□ -1.46
TOP3A-210ENST00000580713 A0A087WSZ3 146 aa5.9□□□□□ -1.46
TOP3A-210ENST00000580713 PCOTHQ58A44 107 aa5.89□□□□□ -1.47
TOP3A-210ENST00000580713 LINC00846Q9NV44 126 aa5.88□□□□□ -1.47
TOP3A-210ENST00000580713 SS18L2Q9UHA2 77 aa5.88□□□□□ -1.47
TOP3A-210ENST00000580713 UBL5Q9BZL1 73 aa5.87□□□□□ -1.47
TOP3A-210ENST00000580713 NREPQ16612 68 aa5.86□□□□□ -1.47
TOP3A-210ENST00000580713 LIMD2Q9BT23 127 aa5.86□□□□□ -1.47
TOP3A-210ENST00000580713 RPS29P62273 56 aaKnown RBP5.85□□□□□ -1.47
TOP3A-210ENST00000580713 COX6B2Q6YFQ2 88 aa5.85□□□□□ -1.47
TOP3A-210ENST00000580713 Q5XG85 94 aa5.84□□□□□ -1.47
TOP3A-210ENST00000580713 Q6ZVQ6 151 aa5.84□□□□□ -1.47
TOP3A-210ENST00000580713 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
TOP3A-210ENST00000580713 LINC00472Q9H8W2 130 aa5.81□□□□□ -1.48
TOP3A-210ENST00000580713 PCP4P48539 62 aa5.8□□□□□ -1.48
TOP3A-210ENST00000580713 LINC00643Q86TS7 51 aa5.8□□□□□ -1.48
TOP3A-210ENST00000580713 Q96NJ1 140 aa5.8□□□□□ -1.48
TOP3A-210ENST00000580713 C9orf92A6NGG3 77 aa5.79□□□□□ -1.48
TOP3A-210ENST00000580713 BPY2O14599 106 aa5.79□□□□□ -1.48
TOP3A-210ENST00000580713 DEFB116Q30KQ4 102 aa5.79□□□□□ -1.48
TOP3A-210ENST00000580713 C1orf195Q5TG92 126 aa5.78□□□□□ -1.48
TOP3A-210ENST00000580713 ATP5EP2Q5VTU8 51 aa5.78□□□□□ -1.48
TOP3A-210ENST00000580713 SIGMAR1Q99720 223 aa5.78□□□□□ -1.48
TOP3A-210ENST00000580713 IGKV3D-7A0A0C4DH55 119 aa5.77□□□□□ -1.49
TOP3A-210ENST00000580713 J3KT08 172 aa5.77□□□□□ -1.49
TOP3A-210ENST00000580713 IGKV4-1P06312 121 aa5.77□□□□□ -1.49
TOP3A-210ENST00000580713 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
TOP3A-210ENST00000580713 CXCL6P80162 114 aa5.76□□□□□ -1.49
TOP3A-210ENST00000580713 FLGP20930 4061 aaPredicted RBP5.76□□□□□ -1.49
TOP3A-210ENST00000580713 USH2AO75445 5202 aa5.75□□□□□ -1.49
TOP3A-210ENST00000580713 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
TOP3A-210ENST00000580713 DSCR10P59022 87 aa5.74□□□□□ -1.49
TOP3A-210ENST00000580713 A8MWP4 228 aa5.73□□□□□ -1.49
TOP3A-210ENST00000580713 NDUFB1O75438 58 aa5.73□□□□□ -1.49
TOP3A-210ENST00000580713 MT-ATP8P03928 68 aa5.73□□□□□ -1.49
TOP3A-210ENST00000580713 K7EQZ3 153 aa5.71□□□□□ -1.5
TOP3A-210ENST00000580713 Q8N9L7 120 aa5.71□□□□□ -1.5
TOP3A-210ENST00000580713 HIST1H4AP62805 103 aaKnown RBP5.7□□□□□ -1.5
TOP3A-210ENST00000580713 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
TOP3A-210ENST00000580713 PRR15Q8IV56 129 aa5.7□□□□□ -1.5
TOP3A-210ENST00000580713 IGHV6-1A0A0B4J1U7 121 aa5.69□□□□□ -1.5
TOP3A-210ENST00000580713 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
TOP3A-210ENST00000580713 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
TOP3A-210ENST00000580713 C8orf87E5RJ46 101 aa5.66□□□□□ -1.5
TOP3A-210ENST00000580713 A0A087WVE0 104 aa5.65□□□□□ -1.5
TOP3A-210ENST00000580713 C8orf17Q9NRJ1 99 aa5.65□□□□□ -1.5
TOP3A-210ENST00000580713 LINC00313P59037 77 aa5.64□□□□□ -1.51
TOP3A-210ENST00000580713 RPL37P61927 97 aaKnown RBP5.64□□□□□ -1.51
TOP3A-210ENST00000580713 MMP24-AS1A0A0U1RRL7 71 aa5.63□□□□□ -1.51
TOP3A-210ENST00000580713 HCG22E2RYF7 251 aa5.63□□□□□ -1.51
TOP3A-210ENST00000580713 NOTCH2NLQ7Z3S9 236 aa5.63□□□□□ -1.51
TOP3A-210ENST00000580713 WFDC13Q8IUB5 93 aa5.62□□□□□ -1.51
TOP3A-210ENST00000580713 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
TOP3A-210ENST00000580713 CASC2Q6XLA1 102 aa5.61□□□□□ -1.51
TOP3A-210ENST00000580713 KRTAP9-8Q9BYQ0 159 aa5.61□□□□□ -1.51
TOP3A-210ENST00000580713 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
TOP3A-210ENST00000580713 TMEM254Q8TBM7 123 aa5.6□□□□□ -1.51
TOP3A-210ENST00000580713 FAM236AA0A1B0GUQ0 79 aa5.58□□□□□ -1.52
TOP3A-210ENST00000580713 FAM236BA0A1B0GV22 79 aa5.58□□□□□ -1.52
TOP3A-210ENST00000580713 MRPL34Q9BQ48 92 aaKnown RBP5.58□□□□□ -1.52
TOP3A-210ENST00000580713 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
TOP3A-210ENST00000580713 KRTAP16-1A8MUX0 517 aa5.57□□□□□ -1.52
TOP3A-210ENST00000580713 MPLKIPQ8TAP9 179 aa5.57□□□□□ -1.52
TOP3A-210ENST00000580713 SCGB1A1P11684 91 aa5.55□□□□□ -1.52
TOP3A-210ENST00000580713 NDUFS5O43920 106 aa5.54□□□□□ -1.52
TOP3A-210ENST00000580713 Q8N9P0 234 aaPredicted RBP5.53□□□□□ -1.52
TOP3A-210ENST00000580713 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
TOP3A-210ENST00000580713 A8MUU9 505 aa5.51□□□□□ -1.53
TOP3A-210ENST00000580713 ATOX1O00244 68 aa5.51□□□□□ -1.53
TOP3A-210ENST00000580713 MT2AP02795 61 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms