RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SSBP3-AS1Q7Z2R9 100 aa8.15□□□□□ -1.11
CDK5RAP3-219ENST00000580670 PRR26Q8N8Z3 221 aa8.15□□□□□ -1.11
CDK5RAP3-219ENST00000580670 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
CDK5RAP3-219ENST00000580670 KRTAP4-5Q9BYR2 181 aa8.1□□□□□ -1.11
CDK5RAP3-219ENST00000580670 PRO0628Q9UI54 55 aa8.1□□□□□ -1.11
CDK5RAP3-219ENST00000580670 Q8N9L7 120 aa8.09□□□□□ -1.11
CDK5RAP3-219ENST00000580670 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
CDK5RAP3-219ENST00000580670 A0A087WSZ3 146 aa8.06□□□□□ -1.12
CDK5RAP3-219ENST00000580670 CD164Q04900 197 aa8.06□□□□□ -1.12
CDK5RAP3-219ENST00000580670 HERC2O95714 4834 aa8.04□□□□□ -1.12
CDK5RAP3-219ENST00000580670 C4orf48Q5BLP8 95 aa8.04□□□□□ -1.12
CDK5RAP3-219ENST00000580670 LINC00304Q8N9R0 145 aa8.03□□□□□ -1.12
CDK5RAP3-219ENST00000580670 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
CDK5RAP3-219ENST00000580670 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
CDK5RAP3-219ENST00000580670 SPAG11AQ6PDA7 123 aa7.99□□□□□ -1.13
CDK5RAP3-219ENST00000580670 ZCCHC13Q8WW36 166 aaKnown RBP7.99□□□□□ -1.13
CDK5RAP3-219ENST00000580670 FAT3Q8TDW7 4589 aa7.99□□□□□ -1.13
CDK5RAP3-219ENST00000580670 SPINK1P00995 79 aa7.99□□□□□ -1.13
CDK5RAP3-219ENST00000580670 DSCR10P59022 87 aa7.98□□□□□ -1.13
CDK5RAP3-219ENST00000580670 MYCBP2O75592 4640 aa7.96□□□□□ -1.14
CDK5RAP3-219ENST00000580670 LIMD2Q9BT23 127 aa7.96□□□□□ -1.14
CDK5RAP3-219ENST00000580670 TNXBP22105 4242 aa7.96□□□□□ -1.14
CDK5RAP3-219ENST00000580670 hDV103S1A0JD37 113 aa7.95□□□□□ -1.14
CDK5RAP3-219ENST00000580670 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
CDK5RAP3-219ENST00000580670 RPS29P62273 56 aaKnown RBP7.94□□□□□ -1.14
CDK5RAP3-219ENST00000580670 ABCA13Q86UQ4 5058 aa7.93□□□□□ -1.14
CDK5RAP3-219ENST00000580670 DEFB116Q30KQ4 102 aa7.92□□□□□ -1.14
CDK5RAP3-219ENST00000580670 LINC00472Q9H8W2 130 aa7.92□□□□□ -1.14
CDK5RAP3-219ENST00000580670 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
CDK5RAP3-219ENST00000580670 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
CDK5RAP3-219ENST00000580670 K7EQZ3 153 aa7.91□□□□□ -1.14
CDK5RAP3-219ENST00000580670 Q96NJ1 140 aa7.91□□□□□ -1.14
CDK5RAP3-219ENST00000580670 CYP4F30PQ9H0H9 118 aa7.91□□□□□ -1.14
CDK5RAP3-219ENST00000580670 HCG22E2RYF7 251 aa7.9□□□□□ -1.14
CDK5RAP3-219ENST00000580670 MPLKIPQ8TAP9 179 aa7.9□□□□□ -1.14
CDK5RAP3-219ENST00000580670 Q1T7F1 81 aa7.89□□□□□ -1.15
CDK5RAP3-219ENST00000580670 C1orf195Q5TG92 126 aa7.87□□□□□ -1.15
CDK5RAP3-219ENST00000580670 C1orf64Q8NEQ6 169 aa7.87□□□□□ -1.15
CDK5RAP3-219ENST00000580670 BRK1Q8WUW1 75 aa7.87□□□□□ -1.15
CDK5RAP3-219ENST00000580670 DMBT1Q9UGM3 2413 aaPredicted RBP7.87□□□□□ -1.15
CDK5RAP3-219ENST00000580670 NDUFB1O75438 58 aa7.86□□□□□ -1.15
CDK5RAP3-219ENST00000580670 J3QL48 77 aa7.84□□□□□ -1.15
CDK5RAP3-219ENST00000580670 A8MWP4 228 aa7.82□□□□□ -1.16
CDK5RAP3-219ENST00000580670 RETNLBQ9BQ08 111 aa7.82□□□□□ -1.16
CDK5RAP3-219ENST00000580670 H3BPC8 53 aa7.81□□□□□ -1.16
CDK5RAP3-219ENST00000580670 TRAV22A0A0B4J277 110 aa7.79□□□□□ -1.16
CDK5RAP3-219ENST00000580670 MP68P56378 58 aa7.79□□□□□ -1.16
CDK5RAP3-219ENST00000580670 PRR15Q8IV56 129 aa7.79□□□□□ -1.16
CDK5RAP3-219ENST00000580670 SPANXA2-OT1Q8N9U9 137 aa7.78□□□□□ -1.16
CDK5RAP3-219ENST00000580670 V9GYY9 64 aa7.77□□□□□ -1.17
CDK5RAP3-219ENST00000580670 IGHV6-1A0A0B4J1U7 121 aa7.76□□□□□ -1.17
CDK5RAP3-219ENST00000580670 A0A1B0GVX0 72 aa7.76□□□□□ -1.17
CDK5RAP3-219ENST00000580670 WFDC13Q8IUB5 93 aa7.75□□□□□ -1.17
CDK5RAP3-219ENST00000580670 CASC2Q6XLA1 102 aa7.73□□□□□ -1.17
CDK5RAP3-219ENST00000580670 PCLOQ9Y6V0 5065 aa7.73□□□□□ -1.17
CDK5RAP3-219ENST00000580670 LINC00208Q96KT6 92 aa7.72□□□□□ -1.17
CDK5RAP3-219ENST00000580670 H0Y9P7 68 aa7.71□□□□□ -1.18
CDK5RAP3-219ENST00000580670 C8orf17Q9NRJ1 99 aa7.71□□□□□ -1.18
CDK5RAP3-219ENST00000580670 NOTCH2NLQ7Z3S9 236 aa7.7□□□□□ -1.18
CDK5RAP3-219ENST00000580670 MMP24-AS1A0A0U1RRL7 71 aa7.69□□□□□ -1.18
CDK5RAP3-219ENST00000580670 PRR4Q16378 134 aa7.69□□□□□ -1.18
CDK5RAP3-219ENST00000580670 C8orf87E5RJ46 101 aa7.69□□□□□ -1.18
CDK5RAP3-219ENST00000580670 LINC00313P59037 77 aa7.68□□□□□ -1.18
CDK5RAP3-219ENST00000580670 IGLV7-46A0A075B6I9 117 aa7.67□□□□□ -1.18
CDK5RAP3-219ENST00000580670 PSPHP1O15172 72 aa7.66□□□□□ -1.18
CDK5RAP3-219ENST00000580670 C9orf92A6NGG3 77 aa7.65□□□□□ -1.18
CDK5RAP3-219ENST00000580670 Q8N9P0 234 aaPredicted RBP7.65□□□□□ -1.18
CDK5RAP3-219ENST00000580670 A8MUN3 132 aa7.64□□□□□ -1.19
CDK5RAP3-219ENST00000580670 Q5VV11 94 aa7.64□□□□□ -1.19
CDK5RAP3-219ENST00000580670 KRTAP16-1A8MUX0 517 aa7.6□□□□□ -1.19
CDK5RAP3-219ENST00000580670 PMAIP1Q13794 54 aa7.6□□□□□ -1.19
CDK5RAP3-219ENST00000580670 MRPL34Q9BQ48 92 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-219ENST00000580670 TP53AIP1Q9HCN2 124 aa7.6□□□□□ -1.19
CDK5RAP3-219ENST00000580670 KRTAP13-3Q3SY46 172 aa7.59□□□□□ -1.2
CDK5RAP3-219ENST00000580670 LOC101927531A0A1B0GV80 90 aa7.58□□□□□ -1.2
CDK5RAP3-219ENST00000580670 NDUFS5O43920 106 aa7.56□□□□□ -1.2
CDK5RAP3-219ENST00000580670 TPRXLQ17RH7 258 aa7.55□□□□□ -1.2
CDK5RAP3-219ENST00000580670 Q75L30 129 aa7.55□□□□□ -1.2
CDK5RAP3-219ENST00000580670 COA5Q86WW8 74 aa7.55□□□□□ -1.2
CDK5RAP3-219ENST00000580670 SEC61GP60059 68 aa7.54□□□□□ -1.2
CDK5RAP3-219ENST00000580670 CHKB-CPT1BH3BT56 60 aa7.53□□□□□ -1.2
CDK5RAP3-219ENST00000580670 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
CDK5RAP3-219ENST00000580670 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
CDK5RAP3-219ENST00000580670 XP32Q5T750 250 aa7.51□□□□□ -1.21
CDK5RAP3-219ENST00000580670 A8MUU9 505 aa7.5□□□□□ -1.21
CDK5RAP3-219ENST00000580670 HERC1Q15751 4861 aa7.5□□□□□ -1.21
CDK5RAP3-219ENST00000580670 LINC01558Q9Y6Z2 57 aa7.49□□□□□ -1.21
CDK5RAP3-219ENST00000580670 A8MU10 97 aa7.48□□□□□ -1.21
CDK5RAP3-219ENST00000580670 ATP11AUNQ6ZP68 121 aa7.48□□□□□ -1.21
CDK5RAP3-219ENST00000580670 LCA10Q71F78 164 aa7.46□□□□□ -1.21
CDK5RAP3-219ENST00000580670 PCOTHQ58A44 107 aa7.45□□□□□ -1.22
CDK5RAP3-219ENST00000580670 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
CDK5RAP3-219ENST00000580670 LPAP08519 4548 aa7.43□□□□□ -1.22
CDK5RAP3-219ENST00000580670 CDC42SE1Q9NRR8 79 aa7.43□□□□□ -1.22
CDK5RAP3-219ENST00000580670 Q5W150 140 aa7.42□□□□□ -1.22
CDK5RAP3-219ENST00000580670 A6NED7 52 aa7.41□□□□□ -1.22
CDK5RAP3-219ENST00000580670 HRES1P13985 223 aa7.41□□□□□ -1.22
CDK5RAP3-219ENST00000580670 KTN1-AS1Q86SY8 53 aa7.39□□□□□ -1.23
CDK5RAP3-219ENST00000580670 HMCN2Q8NDA2 5059 aa7.38□□□□□ -1.23
CDK5RAP3-219ENST00000580670 A6NN06 94 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms