RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 SERF1AO75920 110 aa3.73□□□□□ -1.81
SMARCE1-217ENST00000580654 HBDP02042 147 aa3.73□□□□□ -1.81
SMARCE1-217ENST00000580654 C10orf91Q5T1B1 145 aa3.73□□□□□ -1.81
SMARCE1-217ENST00000580654 OBSCN-AS1Q96MR7 158 aa3.73□□□□□ -1.81
SMARCE1-217ENST00000580654 NAA38Q9BRA0 125 aaKnown RBP3.73□□□□□ -1.81
SMARCE1-217ENST00000580654 PRO1933Q9H354 126 aa3.73□□□□□ -1.81
SMARCE1-217ENST00000580654 TRBV10-2A0A0K0K1G8 114 aa3.72□□□□□ -1.81
SMARCE1-217ENST00000580654 FAM236AA0A1B0GUQ0 79 aa3.72□□□□□ -1.81
SMARCE1-217ENST00000580654 FAM236BA0A1B0GV22 79 aa3.72□□□□□ -1.81
SMARCE1-217ENST00000580654 TMEM223A0PJW6 202 aa3.72□□□□□ -1.81
SMARCE1-217ENST00000580654 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
SMARCE1-217ENST00000580654 ATOH7Q8N100 152 aa3.72□□□□□ -1.81
SMARCE1-217ENST00000580654 SEC11CQ9BY50 192 aa3.72□□□□□ -1.81
SMARCE1-217ENST00000580654 TRAV23DV6A0A075B6W5 121 aa3.71□□□□□ -1.82
SMARCE1-217ENST00000580654 A0A096LNJ9 63 aa3.71□□□□□ -1.82
SMARCE1-217ENST00000580654 CLLU1Q5K131 121 aa3.71□□□□□ -1.82
SMARCE1-217ENST00000580654 S100A7L2Q5SY68 101 aa3.71□□□□□ -1.82
SMARCE1-217ENST00000580654 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
SMARCE1-217ENST00000580654 LOC107984156A0A0G2JMH3 177 aa3.7□□□□□ -1.82
SMARCE1-217ENST00000580654 MYMXA0A1B0GTQ4 84 aa3.7□□□□□ -1.82
SMARCE1-217ENST00000580654 TMEM256-PLSCR3K7ERE1 68 aa3.7□□□□□ -1.82
SMARCE1-217ENST00000580654 IFITM1P13164 125 aa3.7□□□□□ -1.82
SMARCE1-217ENST00000580654 PCP2Q8IVA1 136 aa3.7□□□□□ -1.82
SMARCE1-217ENST00000580654 ARL17AQ8IVW1 177 aa3.7□□□□□ -1.82
SMARCE1-217ENST00000580654 SVBPQ8N300 66 aa3.7□□□□□ -1.82
SMARCE1-217ENST00000580654 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
SMARCE1-217ENST00000580654 TRAPPC1Q9Y5R8 145 aa3.7□□□□□ -1.82
SMARCE1-217ENST00000580654 HINT1P49773 126 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-217ENST00000580654 LINC01545Q5VT33 79 aa3.69□□□□□ -1.82
SMARCE1-217ENST00000580654 C18orf32Q8TCD1 76 aa3.69□□□□□ -1.82
SMARCE1-217ENST00000580654 UQCRQO14949 82 aa3.68□□□□□ -1.82
SMARCE1-217ENST00000580654 HIST1H2BKO60814 126 aa3.68□□□□□ -1.82
SMARCE1-217ENST00000580654 HIST1H2BJP06899 126 aa3.68□□□□□ -1.82
SMARCE1-217ENST00000580654 HRES1P13985 223 aa3.68□□□□□ -1.82
SMARCE1-217ENST00000580654 HIST1H4AP62805 103 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-217ENST00000580654 LINC01554Q52M75 96 aa3.68□□□□□ -1.82
SMARCE1-217ENST00000580654 TEN1Q86WV5 123 aa3.68□□□□□ -1.82
SMARCE1-217ENST00000580654 RAB37Q96AX2 223 aa3.68□□□□□ -1.82
SMARCE1-217ENST00000580654 IFI27L1Q96BM0 104 aa3.68□□□□□ -1.82
SMARCE1-217ENST00000580654 TRAV12-1A0A0B4J245 112 aa3.67□□□□□ -1.82
SMARCE1-217ENST00000580654 NMUP48645 174 aa3.67□□□□□ -1.82
SMARCE1-217ENST00000580654 RPS10P5Q9NQ39 176 aa3.67□□□□□ -1.82
SMARCE1-217ENST00000580654 A8MUU9 505 aa3.66□□□□□ -1.82
SMARCE1-217ENST00000580654 TCL1BO95988 128 aa3.66□□□□□ -1.82
SMARCE1-217ENST00000580654 DEFB105AQ8NG35 78 aa3.66□□□□□ -1.82
SMARCE1-217ENST00000580654 Q96NJ1 140 aa3.66□□□□□ -1.82
SMARCE1-217ENST00000580654 VAMP8Q9BV40 100 aa3.66□□□□□ -1.82
SMARCE1-217ENST00000580654 C8orf17Q9NRJ1 99 aa3.66□□□□□ -1.82
SMARCE1-217ENST00000580654 LEPROTO15243 131 aa3.65□□□□□ -1.83
SMARCE1-217ENST00000580654 NPC2P61916 151 aa3.65□□□□□ -1.83
SMARCE1-217ENST00000580654 TEX49A0A1B0GTD5 131 aa3.64□□□□□ -1.83
SMARCE1-217ENST00000580654 K7ERS5 55 aa3.64□□□□□ -1.83
SMARCE1-217ENST00000580654 BPY2O14599 106 aa3.64□□□□□ -1.83
SMARCE1-217ENST00000580654 IGFL1Q6UW32 110 aa3.64□□□□□ -1.83
SMARCE1-217ENST00000580654 CHCHD1Q96BP2 118 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-217ENST00000580654 HIST1H2BLQ99880 126 aa3.64□□□□□ -1.83
SMARCE1-217ENST00000580654 A6NN06 94 aa3.63□□□□□ -1.83
SMARCE1-217ENST00000580654 TSPEAR-AS2P59090 65 aa3.63□□□□□ -1.83
SMARCE1-217ENST00000580654 SOSTDC1Q6X4U4 206 aa3.63□□□□□ -1.83
SMARCE1-217ENST00000580654 HIST3H2BBQ8N257 126 aa3.63□□□□□ -1.83
SMARCE1-217ENST00000580654 H3BT86 120 aa3.62□□□□□ -1.83
SMARCE1-217ENST00000580654 C7orf65Q6ZTY9 151 aa3.62□□□□□ -1.83
SMARCE1-217ENST00000580654 A8MWP4 228 aa3.61□□□□□ -1.83
SMARCE1-217ENST00000580654 TRACP01848 142 aa3.61□□□□□ -1.83
SMARCE1-217ENST00000580654 ELOF1P60002 83 aaKnown RBP3.61□□□□□ -1.83
SMARCE1-217ENST00000580654 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
SMARCE1-217ENST00000580654 SERP1Q9Y6X1 66 aa3.61□□□□□ -1.83
SMARCE1-217ENST00000580654 IGLV5-48A0A075B6I7 105 aa3.6□□□□□ -1.83
SMARCE1-217ENST00000580654 K7ERJ3 54 aa3.6□□□□□ -1.83
SMARCE1-217ENST00000580654 COX7BP24311 80 aa3.6□□□□□ -1.83
SMARCE1-217ENST00000580654 PLNP26678 52 aa3.6□□□□□ -1.83
SMARCE1-217ENST00000580654 LEPROTL1O95214 131 aa3.59□□□□□ -1.83
SMARCE1-217ENST00000580654 PMCHL2Q9BQD1 86 aa3.59□□□□□ -1.83
SMARCE1-217ENST00000580654 TRBV7-7A0A0K0K1E9 115 aa3.58□□□□□ -1.84
SMARCE1-217ENST00000580654 IGKCP01834 107 aa3.58□□□□□ -1.84
SMARCE1-217ENST00000580654 A0A1B0GVX0 72 aa3.57□□□□□ -1.84
SMARCE1-217ENST00000580654 FABP4P15090 132 aa3.57□□□□□ -1.84
SMARCE1-217ENST00000580654 LINC00308Q8TCZ7 52 aa3.57□□□□□ -1.84
SMARCE1-217ENST00000580654 APOC3P02656 99 aa3.56□□□□□ -1.84
SMARCE1-217ENST00000580654 MT1BP07438 61 aa3.56□□□□□ -1.84
SMARCE1-217ENST00000580654 SPRR2EP22531 72 aa3.56□□□□□ -1.84
SMARCE1-217ENST00000580654 SPRR2BP35325 72 aa3.56□□□□□ -1.84
SMARCE1-217ENST00000580654 SPRR2AP35326 72 aa3.56□□□□□ -1.84
SMARCE1-217ENST00000580654 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
SMARCE1-217ENST00000580654 TTTY13Q9BZ97 58 aa3.54□□□□□ -1.84
SMARCE1-217ENST00000580654 F8W1H4 67 aa3.53□□□□□ -1.84
SMARCE1-217ENST00000580654 F8WEM9 126 aa3.53□□□□□ -1.84
SMARCE1-217ENST00000580654 K7EP34 96 aa3.53□□□□□ -1.84
SMARCE1-217ENST00000580654 TIMM17BO60830 172 aa3.53□□□□□ -1.84
SMARCE1-217ENST00000580654 SNCGO76070 127 aa3.53□□□□□ -1.84
SMARCE1-217ENST00000580654 MT-ATP8P03928 68 aa3.53□□□□□ -1.84
SMARCE1-217ENST00000580654 DSCR10P59022 87 aa3.53□□□□□ -1.84
SMARCE1-217ENST00000580654 UQCR10Q9UDW1 63 aa3.53□□□□□ -1.84
SMARCE1-217ENST00000580654 A6NED7 52 aa3.52□□□□□ -1.85
SMARCE1-217ENST00000580654 ZNF815PA8K554 130 aa3.52□□□□□ -1.85
SMARCE1-217ENST00000580654 COLCA2A8K830 154 aa3.52□□□□□ -1.85
SMARCE1-217ENST00000580654 LITAFQ99732 161 aa3.52□□□□□ -1.85
SMARCE1-217ENST00000580654 COX7CP15954 63 aa3.51□□□□□ -1.85
SMARCE1-217ENST00000580654 ATP5EP56381 51 aaPredicted RBP3.51□□□□□ -1.85
SMARCE1-217ENST00000580654 CLEC2BQ92478 149 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms