RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 LY6G6CO95867 125 aa6.3□□□□□ -1.4
TOP3A-209ENST00000580095 Q75L30 129 aa6.3□□□□□ -1.4
TOP3A-209ENST00000580095 IGLV5-52A0A0A0MRZ9 124 aa6.3□□□□□ -1.4
TOP3A-209ENST00000580095 A6NED7 52 aa6.29□□□□□ -1.4
TOP3A-209ENST00000580095 Q96NJ1 140 aa6.29□□□□□ -1.4
TOP3A-209ENST00000580095 LIMD2Q9BT23 127 aa6.29□□□□□ -1.4
TOP3A-209ENST00000580095 CDC42SE1Q9NRR8 79 aa6.29□□□□□ -1.4
TOP3A-209ENST00000580095 MMP24-AS1A0A0U1RRL7 71 aa6.29□□□□□ -1.4
TOP3A-209ENST00000580095 PRAC1Q96KF2 57 aa6.29□□□□□ -1.4
TOP3A-209ENST00000580095 IGHV6-1A0A0B4J1U7 121 aa6.29□□□□□ -1.4
TOP3A-209ENST00000580095 Q6ZR54 194 aa6.29□□□□□ -1.4
TOP3A-209ENST00000580095 WWC2-AS2Q96NR7 200 aa6.29□□□□□ -1.4
TOP3A-209ENST00000580095 A0A087X002 238 aa6.27□□□□□ -1.41
TOP3A-209ENST00000580095 LINC01554Q52M75 96 aa6.27□□□□□ -1.41
TOP3A-209ENST00000580095 NOTCH2NLQ7Z3S9 236 aa6.27□□□□□ -1.41
TOP3A-209ENST00000580095 SPINK6Q6UWN8 80 aa6.27□□□□□ -1.41
TOP3A-209ENST00000580095 NDUFB1O75438 58 aa6.26□□□□□ -1.41
TOP3A-209ENST00000580095 LINC00313P59037 77 aa6.26□□□□□ -1.41
TOP3A-209ENST00000580095 C1orf134Q5TEV5 83 aa6.26□□□□□ -1.41
TOP3A-209ENST00000580095 ZNF861PO60384 105 aa6.26□□□□□ -1.41
TOP3A-209ENST00000580095 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
TOP3A-209ENST00000580095 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
TOP3A-209ENST00000580095 LOC101927531A0A1B0GV80 90 aa6.25□□□□□ -1.41
TOP3A-209ENST00000580095 PCOTHQ58A44 107 aa6.25□□□□□ -1.41
TOP3A-209ENST00000580095 DNAH11Q96DT5 4516 aa6.24□□□□□ -1.41
TOP3A-209ENST00000580095 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
TOP3A-209ENST00000580095 CIRBP-AS1Q8TBR5 109 aa6.24□□□□□ -1.41
TOP3A-209ENST00000580095 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
TOP3A-209ENST00000580095 C8orf17Q9NRJ1 99 aa6.22□□□□□ -1.41
TOP3A-209ENST00000580095 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
TOP3A-209ENST00000580095 CDK2AP2O75956 126 aa6.2□□□□□ -1.42
TOP3A-209ENST00000580095 IGLV7-43P04211 117 aa6.2□□□□□ -1.42
TOP3A-209ENST00000580095 A0A1B0GVX0 72 aa6.19□□□□□ -1.42
TOP3A-209ENST00000580095 ALMS1Q8TCU4 4167 aa6.19□□□□□ -1.42
TOP3A-209ENST00000580095 LRP1BQ9NZR2 4599 aa6.18□□□□□ -1.42
TOP3A-209ENST00000580095 HYDINQ4G0P3 5121 aa6.18□□□□□ -1.42
TOP3A-209ENST00000580095 DNAH5Q8TE73 4624 aa6.18□□□□□ -1.42
TOP3A-209ENST00000580095 SPINK7P58062 85 aa6.15□□□□□ -1.42
TOP3A-209ENST00000580095 ASB16-AS1Q495Z4 193 aa6.15□□□□□ -1.43
TOP3A-209ENST00000580095 MRPL34Q9BQ48 92 aaKnown RBP6.14□□□□□ -1.43
TOP3A-209ENST00000580095 H3BPC8 53 aa6.13□□□□□ -1.43
TOP3A-209ENST00000580095 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
TOP3A-209ENST00000580095 RETNLBQ9BQ08 111 aa6.13□□□□□ -1.43
TOP3A-209ENST00000580095 Q5W150 140 aa6.12□□□□□ -1.43
TOP3A-209ENST00000580095 SPANXA2-OT1Q8N9U9 137 aa6.12□□□□□ -1.43
TOP3A-209ENST00000580095 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
TOP3A-209ENST00000580095 COA5Q86WW8 74 aa6.11□□□□□ -1.43
TOP3A-209ENST00000580095 TP53AIP1Q9HCN2 124 aa6.11□□□□□ -1.43
TOP3A-209ENST00000580095 A0A0A0MQY5 61 aa6.09□□□□□ -1.43
TOP3A-209ENST00000580095 IGLV7-46A0A075B6I9 117 aa6.09□□□□□ -1.43
TOP3A-209ENST00000580095 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.43
TOP3A-209ENST00000580095 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
TOP3A-209ENST00000580095 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
TOP3A-209ENST00000580095 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
TOP3A-209ENST00000580095 PKD1P98161 4303 aa6.08□□□□□ -1.44
TOP3A-209ENST00000580095 FAT2Q9NYQ8 4349 aa6.08□□□□□ -1.44
TOP3A-209ENST00000580095 SPAG11AQ6PDA7 123 aa6.05□□□□□ -1.44
TOP3A-209ENST00000580095 J3QL48 77 aa6.05□□□□□ -1.44
TOP3A-209ENST00000580095 SSBP3-AS1Q7Z2R9 100 aa6.04□□□□□ -1.44
TOP3A-209ENST00000580095 HRES1P13985 223 aa6.03□□□□□ -1.44
TOP3A-209ENST00000580095 Q6ZSA8 131 aa6.02□□□□□ -1.45
TOP3A-209ENST00000580095 KRTAP13-3Q3SY46 172 aa6.01□□□□□ -1.45
TOP3A-209ENST00000580095 KRTAP1-4P0C5Y4 121 aa6□□□□□ -1.45
TOP3A-209ENST00000580095 SMR3BP02814 79 aaPredicted RBP5.98□□□□□ -1.45
TOP3A-209ENST00000580095 CSAG1Q6PB30 78 aa5.98□□□□□ -1.45
TOP3A-209ENST00000580095 FAT1Q14517 4588 aa5.94□□□□□ -1.46
TOP3A-209ENST00000580095 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
TOP3A-209ENST00000580095 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
TOP3A-209ENST00000580095 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
TOP3A-209ENST00000580095 KRTAP16-1A8MUX0 517 aa5.92□□□□□ -1.46
TOP3A-209ENST00000580095 SACSQ9NZJ4 4579 aa5.91□□□□□ -1.46
TOP3A-209ENST00000580095 FAM229AH3BQW9 127 aa5.91□□□□□ -1.46
TOP3A-209ENST00000580095 DYNC1H1Q14204 4646 aaKnown RBP5.87□□□□□ -1.47
TOP3A-209ENST00000580095 ACYP2P14621 99 aa5.87□□□□□ -1.47
TOP3A-209ENST00000580095 ROMO1P60602 79 aa5.86□□□□□ -1.47
TOP3A-209ENST00000580095 DMAC1Q96GE9 116 aa5.85□□□□□ -1.47
TOP3A-209ENST00000580095 C9orf92A6NGG3 77 aa5.84□□□□□ -1.48
TOP3A-209ENST00000580095 SPINK1P00995 79 aa5.83□□□□□ -1.48
TOP3A-209ENST00000580095 LINC00304Q8N9R0 145 aa5.83□□□□□ -1.48
TOP3A-209ENST00000580095 SPATA8Q6RVD6 105 aa5.82□□□□□ -1.48
TOP3A-209ENST00000580095 Q8N1X5 172 aa5.81□□□□□ -1.48
TOP3A-209ENST00000580095 KMT2CQ8NEZ4 4911 aaKnown RBP5.81□□□□□ -1.48
TOP3A-209ENST00000580095 P0C880 135 aa5.78□□□□□ -1.48
TOP3A-209ENST00000580095 APOBP04114 4563 aaKnown RBP5.77□□□□□ -1.49
TOP3A-209ENST00000580095 A0A1B0GU69 56 aa5.75□□□□□ -1.49
TOP3A-209ENST00000580095 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
TOP3A-209ENST00000580095 A0A1B0GVY2 172 aa5.74□□□□□ -1.49
TOP3A-209ENST00000580095 FLG2Q5D862 2391 aaPredicted RBP5.73□□□□□ -1.49
TOP3A-209ENST00000580095 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
TOP3A-209ENST00000580095 RYR2Q92736 4967 aa5.72□□□□□ -1.49
TOP3A-209ENST00000580095 KRTAP10-4P60372 401 aaPredicted RBP5.72□□□□□ -1.49
TOP3A-209ENST00000580095 DMBT1Q9UGM3 2413 aaPredicted RBP5.72□□□□□ -1.49
TOP3A-209ENST00000580095 KRTAP25-1Q3LHN0 102 aa5.71□□□□□ -1.5
TOP3A-209ENST00000580095 PKHD1L1Q86WI1 4243 aa5.67□□□□□ -1.5
TOP3A-209ENST00000580095 UQCR11O14957 56 aa5.67□□□□□ -1.5
TOP3A-209ENST00000580095 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
TOP3A-209ENST00000580095 RPS29P62273 56 aaKnown RBP5.64□□□□□ -1.51
TOP3A-209ENST00000580095 A8MUU9 505 aa5.63□□□□□ -1.51
TOP3A-209ENST00000580095 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
TOP3A-209ENST00000580095 C20orf166-AS1Q96NR2 134 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms