RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 LOC110117498A0A087WWA1 95 aa7.06□□□□□ -1.28
TRAF4-214ENST00000580073 JMJD7-PLA2G4BH0Y9G9 81 aa7.06□□□□□ -1.28
TRAF4-214ENST00000580073 VPS25Q9BRG1 176 aa7.06□□□□□ -1.28
TRAF4-214ENST00000580073 ATP11AUNQ6ZP68 121 aa7.05□□□□□ -1.28
TRAF4-214ENST00000580073 SS18L2Q9UHA2 77 aa7.05□□□□□ -1.28
TRAF4-214ENST00000580073 LINC00472Q9H8W2 130 aa7.04□□□□□ -1.28
TRAF4-214ENST00000580073 DEFB116Q30KQ4 102 aa7.03□□□□□ -1.28
TRAF4-214ENST00000580073 FLGP20930 4061 aaPredicted RBP7.02□□□□□ -1.28
TRAF4-214ENST00000580073 Q75L30 129 aa7.02□□□□□ -1.29
TRAF4-214ENST00000580073 PDE6GP18545 87 aa6.98□□□□□ -1.29
TRAF4-214ENST00000580073 IGKV4-1P06312 121 aa6.97□□□□□ -1.29
TRAF4-214ENST00000580073 GTF2H5Q6ZYL4 71 aa6.97□□□□□ -1.29
TRAF4-214ENST00000580073 NOTCH2NLQ7Z3S9 236 aa6.96□□□□□ -1.3
TRAF4-214ENST00000580073 SIGMAR1Q99720 223 aa6.95□□□□□ -1.3
TRAF4-214ENST00000580073 DSCR10P59022 87 aa6.94□□□□□ -1.3
TRAF4-214ENST00000580073 A0A1B0GW54 56 aa6.93□□□□□ -1.3
TRAF4-214ENST00000580073 F8W1H4 67 aa6.92□□□□□ -1.3
TRAF4-214ENST00000580073 A0A1B0GV90 55 aa6.91□□□□□ -1.3
TRAF4-214ENST00000580073 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
TRAF4-214ENST00000580073 C21orf62-AS1Q17RA5 79 aa6.9□□□□□ -1.3
TRAF4-214ENST00000580073 ETDBQ3ZM63 59 aa6.9□□□□□ -1.3
TRAF4-214ENST00000580073 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
TRAF4-214ENST00000580073 C20orf166-AS1Q96NR2 134 aa6.88□□□□□ -1.31
TRAF4-214ENST00000580073 A0A1B0GVX0 72 aa6.87□□□□□ -1.31
TRAF4-214ENST00000580073 A8MUU9 505 aa6.87□□□□□ -1.31
TRAF4-214ENST00000580073 LINC00313P59037 77 aa6.87□□□□□ -1.31
TRAF4-214ENST00000580073 NREPQ16612 68 aa6.87□□□□□ -1.31
TRAF4-214ENST00000580073 IGKV3D-7A0A0C4DH55 119 aa6.86□□□□□ -1.31
TRAF4-214ENST00000580073 J3KT08 172 aa6.86□□□□□ -1.31
TRAF4-214ENST00000580073 LINC00846Q9NV44 126 aa6.85□□□□□ -1.31
TRAF4-214ENST00000580073 Q6ZVQ6 151 aa6.84□□□□□ -1.31
TRAF4-214ENST00000580073 KRTAP9-7A8MTY7 169 aa6.83□□□□□ -1.32
TRAF4-214ENST00000580073 A8MWP4 228 aa6.83□□□□□ -1.32
TRAF4-214ENST00000580073 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.83□□□□□ -1.32
TRAF4-214ENST00000580073 FAM236DA0A1B0GTK5 79 aa6.81□□□□□ -1.32
TRAF4-214ENST00000580073 FAM236CP0DP71 79 aa6.81□□□□□ -1.32
TRAF4-214ENST00000580073 C8orf87E5RJ46 101 aa6.8□□□□□ -1.32
TRAF4-214ENST00000580073 PRR15Q8IV56 129 aa6.8□□□□□ -1.32
TRAF4-214ENST00000580073 C8orf17Q9NRJ1 99 aa6.8□□□□□ -1.32
TRAF4-214ENST00000580073 K7EQZ3 153 aa6.79□□□□□ -1.32
TRAF4-214ENST00000580073 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
TRAF4-214ENST00000580073 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
TRAF4-214ENST00000580073 MMP24-AS1A0A0U1RRL7 71 aa6.77□□□□□ -1.33
TRAF4-214ENST00000580073 BPY2O14599 106 aa6.77□□□□□ -1.33
TRAF4-214ENST00000580073 NDUFB1O75438 58 aa6.77□□□□□ -1.33
TRAF4-214ENST00000580073 Q8N9L7 120 aa6.77□□□□□ -1.33
TRAF4-214ENST00000580073 Q8N9P0 234 aaPredicted RBP6.73□□□□□ -1.33
TRAF4-214ENST00000580073 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
TRAF4-214ENST00000580073 SSPOA2VEC9 5147 aa6.69□□□□□ -1.34
TRAF4-214ENST00000580073 MT2AP02795 61 aa6.69□□□□□ -1.34
TRAF4-214ENST00000580073 USH2AO75445 5202 aa6.68□□□□□ -1.34
TRAF4-214ENST00000580073 TMEM254Q8TBM7 123 aa6.68□□□□□ -1.34
TRAF4-214ENST00000580073 hDV103S1A0JD37 113 aa6.67□□□□□ -1.34
TRAF4-214ENST00000580073 MRPL34Q9BQ48 92 aaKnown RBP6.67□□□□□ -1.34
TRAF4-214ENST00000580073 FAM240AA0A1B0GVK7 77 aa6.66□□□□□ -1.34
TRAF4-214ENST00000580073 WFDC13Q8IUB5 93 aa6.66□□□□□ -1.34
TRAF4-214ENST00000580073 ZCCHC13Q8WW36 166 aaKnown RBP6.66□□□□□ -1.34
TRAF4-214ENST00000580073 ACYP1P07311 99 aa6.65□□□□□ -1.34
TRAF4-214ENST00000580073 KRTAP10-10P60014 251 aa6.65□□□□□ -1.34
TRAF4-214ENST00000580073 HRES1P13985 223 aa6.64□□□□□ -1.35
TRAF4-214ENST00000580073 MPLKIPQ8TAP9 179 aa6.64□□□□□ -1.35
TRAF4-214ENST00000580073 MT1FP04733 61 aa6.63□□□□□ -1.35
TRAF4-214ENST00000580073 CXCL6P80162 114 aa6.63□□□□□ -1.35
TRAF4-214ENST00000580073 CASC2Q6XLA1 102 aa6.63□□□□□ -1.35
TRAF4-214ENST00000580073 KRTAP19-1Q8IUB9 90 aa6.62□□□□□ -1.35
TRAF4-214ENST00000580073 HCG22E2RYF7 251 aa6.6□□□□□ -1.35
TRAF4-214ENST00000580073 LCE2BO14633 110 aa6.6□□□□□ -1.35
TRAF4-214ENST00000580073 Q5W150 140 aa6.6□□□□□ -1.35
TRAF4-214ENST00000580073 MACF1Q9UPN3 7388 aaKnown RBP6.59□□□□□ -1.36
TRAF4-214ENST00000580073 NDUFS5O43920 106 aa6.58□□□□□ -1.36
TRAF4-214ENST00000580073 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
TRAF4-214ENST00000580073 FCGBPQ9Y6R7 5405 aaPredicted RBP6.57□□□□□ -1.36
TRAF4-214ENST00000580073 SPINK7P58062 85 aa6.56□□□□□ -1.36
TRAF4-214ENST00000580073 LINC00643Q86TS7 51 aa6.53□□□□□ -1.36
TRAF4-214ENST00000580073 ATP5EP2Q5VTU8 51 aa6.52□□□□□ -1.37
TRAF4-214ENST00000580073 A0A087WVE0 104 aa6.5□□□□□ -1.37
TRAF4-214ENST00000580073 HIST1H4AP62805 103 aaKnown RBP6.48□□□□□ -1.37
TRAF4-214ENST00000580073 J3QR89 54 aa6.47□□□□□ -1.37
TRAF4-214ENST00000580073 KRTAP19-6Q3LI70 58 aa6.47□□□□□ -1.37
TRAF4-214ENST00000580073 SYNE2Q8WXH0 6885 aaKnown RBP6.46□□□□□ -1.38
TRAF4-214ENST00000580073 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
TRAF4-214ENST00000580073 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
TRAF4-214ENST00000580073 TP53AIP1Q9HCN2 124 aa6.42□□□□□ -1.38
TRAF4-214ENST00000580073 C7orf65Q6ZTY9 151 aa6.4□□□□□ -1.38
TRAF4-214ENST00000580073 K7ERU9 68 aa6.38□□□□□ -1.39
TRAF4-214ENST00000580073 MT-ATP8P03928 68 aa6.38□□□□□ -1.39
TRAF4-214ENST00000580073 C4orf26Q17RF5 130 aa6.34□□□□□ -1.39
TRAF4-214ENST00000580073 KRTAP3-1Q9BYR8 98 aa6.34□□□□□ -1.39
TRAF4-214ENST00000580073 OCR1Q9BZK8 76 aa6.34□□□□□ -1.39
TRAF4-214ENST00000580073 TRAV22A0A0B4J277 110 aa6.33□□□□□ -1.4
TRAF4-214ENST00000580073 UQCRQO14949 82 aa6.33□□□□□ -1.4
TRAF4-214ENST00000580073 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
TRAF4-214ENST00000580073 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
TRAF4-214ENST00000580073 CYP4F30PQ9H0H9 118 aa6.32□□□□□ -1.4
TRAF4-214ENST00000580073 H0Y9P7 68 aa6.3□□□□□ -1.4
TRAF4-214ENST00000580073 IMUPQ9GZP8 106 aa6.28□□□□□ -1.4
TRAF4-214ENST00000580073 LOC101927531A0A1B0GV80 90 aa6.26□□□□□ -1.41
TRAF4-214ENST00000580073 C1orf64Q8NEQ6 169 aa6.23□□□□□ -1.41
TRAF4-214ENST00000580073 ATOX1O00244 68 aa6.22□□□□□ -1.41
TRAF4-214ENST00000580073 KLKP1Q107X0 134 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms