RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 DSCR10P59022 87 aa12.21□□□□□ -0.45
NDEL1-207ENST00000580012 LINC00313P59037 77 aa12.2□□□□□ -0.46
NDEL1-207ENST00000580012 A0A1B0GVX0 72 aa12.19□□□□□ -0.46
NDEL1-207ENST00000580012 NOTCH2NLQ7Z3S9 236 aa12.19□□□□□ -0.46
NDEL1-207ENST00000580012 Q75L30 129 aa12.18□□□□□ -0.46
NDEL1-207ENST00000580012 IGHV6-1A0A0B4J1U7 121 aa12.16□□□□□ -0.46
NDEL1-207ENST00000580012 KRTAP16-1A8MUX0 517 aa12.16□□□□□ -0.46
NDEL1-207ENST00000580012 A8MWP4 228 aa12.16□□□□□ -0.46
NDEL1-207ENST00000580012 C20orf166-AS1Q96NR2 134 aa12.16□□□□□ -0.46
NDEL1-207ENST00000580012 A0A0U1RQV1 116 aa12.15□□□□□ -0.46
NDEL1-207ENST00000580012 PCOTHQ58A44 107 aa12.15□□□□□ -0.46
NDEL1-207ENST00000580012 A8MUU9 505 aa12.14□□□□□ -0.47
NDEL1-207ENST00000580012 C8orf87E5RJ46 101 aa12.14□□□□□ -0.47
NDEL1-207ENST00000580012 KRTAP4-1Q9BYQ7 146 aa12.14□□□□□ -0.47
NDEL1-207ENST00000580012 IGKV3D-7A0A0C4DH55 119 aa12.13□□□□□ -0.47
NDEL1-207ENST00000580012 NDUFB1O75438 58 aa12.13□□□□□ -0.47
NDEL1-207ENST00000580012 Q6ZVQ6 151 aa12.13□□□□□ -0.47
NDEL1-207ENST00000580012 LINC00846Q9NV44 126 aa12.13□□□□□ -0.47
NDEL1-207ENST00000580012 PRR15Q8IV56 129 aa12.09□□□□□ -0.47
NDEL1-207ENST00000580012 BPY2O14599 106 aa12.06□□□□□ -0.48
NDEL1-207ENST00000580012 UBL5Q9BZL1 73 aa12.05□□□□□ -0.48
NDEL1-207ENST00000580012 C8orf17Q9NRJ1 99 aa12.04□□□□□ -0.48
NDEL1-207ENST00000580012 ATP11AUNQ6ZP68 121 aa12.02□□□□□ -0.49
NDEL1-207ENST00000580012 FAT4Q6V0I7 4981 aa12□□□□□ -0.49
NDEL1-207ENST00000580012 K7EQZ3 153 aa11.99□□□□□ -0.49
NDEL1-207ENST00000580012 ACYP1P07311 99 aa11.96□□□□□ -0.49
NDEL1-207ENST00000580012 Q8N9P0 234 aaPredicted RBP11.96□□□□□ -0.49
NDEL1-207ENST00000580012 KRTAP9-2Q9BYQ4 174 aa11.96□□□□□ -0.49
NDEL1-207ENST00000580012 MMP24-AS1A0A0U1RRL7 71 aa11.95□□□□□ -0.5
NDEL1-207ENST00000580012 FAM240AA0A1B0GVK7 77 aa11.95□□□□□ -0.5
NDEL1-207ENST00000580012 LCE2AQ5TA79 106 aaPredicted RBP11.94□□□□□ -0.5
NDEL1-207ENST00000580012 Q8N9L7 120 aa11.9□□□□□ -0.5
NDEL1-207ENST00000580012 TMEM254Q8TBM7 123 aa11.89□□□□□ -0.51
NDEL1-207ENST00000580012 CXCL6P80162 114 aa11.87□□□□□ -0.51
NDEL1-207ENST00000580012 hDV103S1A0JD37 113 aa11.86□□□□□ -0.51
NDEL1-207ENST00000580012 MRPL34Q9BQ48 92 aaKnown RBP11.86□□□□□ -0.51
NDEL1-207ENST00000580012 KRTAP19-2Q3LHN2 52 aa11.82□□□□□ -0.52
NDEL1-207ENST00000580012 ZCCHC13Q8WW36 166 aaKnown RBP11.81□□□□□ -0.52
NDEL1-207ENST00000580012 CASC2Q6XLA1 102 aa11.77□□□□□ -0.53
NDEL1-207ENST00000580012 LCE2CQ5TA81 110 aa11.76□□□□□ -0.53
NDEL1-207ENST00000580012 WFDC13Q8IUB5 93 aa11.76□□□□□ -0.53
NDEL1-207ENST00000580012 HCG22E2RYF7 251 aa11.74□□□□□ -0.53
NDEL1-207ENST00000580012 ATP5EP2Q5VTU8 51 aa11.72□□□□□ -0.53
NDEL1-207ENST00000580012 J3QR89 54 aa11.71□□□□□ -0.53
NDEL1-207ENST00000580012 LINC00643Q86TS7 51 aa11.7□□□□□ -0.54
NDEL1-207ENST00000580012 NDUFS5O43920 106 aa11.66□□□□□ -0.54
NDEL1-207ENST00000580012 KRTAP9-6A0A140TA67 174 aa11.65□□□□□ -0.54
NDEL1-207ENST00000580012 SPINK7P58062 85 aa11.62□□□□□ -0.55
NDEL1-207ENST00000580012 Q5W150 140 aa11.62□□□□□ -0.55
NDEL1-207ENST00000580012 HRES1P13985 223 aa11.61□□□□□ -0.55
NDEL1-207ENST00000580012 MPLKIPQ8TAP9 179 aa11.6□□□□□ -0.55
NDEL1-207ENST00000580012 HIST1H4AP62805 103 aaKnown RBP11.54□□□□□ -0.56
NDEL1-207ENST00000580012 MT1HP80294 61 aa11.53□□□□□ -0.56
NDEL1-207ENST00000580012 COX6B2Q6YFQ2 88 aa11.53□□□□□ -0.56
NDEL1-207ENST00000580012 TP53AIP1Q9HCN2 124 aa11.52□□□□□ -0.57
NDEL1-207ENST00000580012 K7ERU9 68 aa11.49□□□□□ -0.57
NDEL1-207ENST00000580012 FLGP20930 4061 aaPredicted RBP11.48□□□□□ -0.57
NDEL1-207ENST00000580012 A0A087WVE0 104 aa11.46□□□□□ -0.57
NDEL1-207ENST00000580012 RBM12B-AS1Q9P1G2 102 aa11.45□□□□□ -0.58
NDEL1-207ENST00000580012 C7orf65Q6ZTY9 151 aa11.4□□□□□ -0.58
NDEL1-207ENST00000580012 IGKV2D-30A0A075B6S6 120 aa11.39□□□□□ -0.59
NDEL1-207ENST00000580012 IGKV2-30P06310 120 aa11.39□□□□□ -0.59
NDEL1-207ENST00000580012 LCE2DQ5TA82 110 aaPredicted RBP11.39□□□□□ -0.59
NDEL1-207ENST00000580012 FSIP2Q5CZC0 6907 aa11.37□□□□□ -0.59
NDEL1-207ENST00000580012 FAM236DA0A1B0GTK5 79 aa11.35□□□□□ -0.59
NDEL1-207ENST00000580012 FAM236CP0DP71 79 aa11.35□□□□□ -0.59
NDEL1-207ENST00000580012 UQCRQO14949 82 aa11.32□□□□□ -0.6
NDEL1-207ENST00000580012 IMUPQ9GZP8 106 aa11.31□□□□□ -0.6
NDEL1-207ENST00000580012 MT-ATP8P03928 68 aa11.29□□□□□ -0.6
NDEL1-207ENST00000580012 TRAV22A0A0B4J277 110 aa11.28□□□□□ -0.6
NDEL1-207ENST00000580012 OCR1Q9BZK8 76 aa11.26□□□□□ -0.61
NDEL1-207ENST00000580012 M0R2T5 61 aa11.25□□□□□ -0.61
NDEL1-207ENST00000580012 CRCT1Q9UGL9 99 aa11.24□□□□□ -0.61
NDEL1-207ENST00000580012 KRTAP10-6P60371 365 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-207ENST00000580012 LORP23490 312 aaPredicted RBP11.22□□□□□ -0.61
NDEL1-207ENST00000580012 CYP4F30PQ9H0H9 118 aa11.22□□□□□ -0.61
NDEL1-207ENST00000580012 LOC101927531A0A1B0GV80 90 aa11.19□□□□□ -0.62
NDEL1-207ENST00000580012 H0Y9P7 68 aa11.18□□□□□ -0.62
NDEL1-207ENST00000580012 ATOX1O00244 68 aa11.18□□□□□ -0.62
NDEL1-207ENST00000580012 C4orf26Q17RF5 130 aa11.18□□□□□ -0.62
NDEL1-207ENST00000580012 H1FX-AS1Q4G0G2 97 aa11.15□□□□□ -0.62
NDEL1-207ENST00000580012 SCGB1A1P11684 91 aa11.13□□□□□ -0.63
NDEL1-207ENST00000580012 KRTAP3-1Q9BYR8 98 aa11.12□□□□□ -0.63
NDEL1-207ENST00000580012 C5orf47Q569G3 176 aa11.11□□□□□ -0.63
NDEL1-207ENST00000580012 C1orf64Q8NEQ6 169 aa11.08□□□□□ -0.64
NDEL1-207ENST00000580012 MP68P56378 58 aa11.06□□□□□ -0.64
NDEL1-207ENST00000580012 LINC00208Q96KT6 92 aa11.05□□□□□ -0.64
NDEL1-207ENST00000580012 FAM236AA0A1B0GUQ0 79 aa11.03□□□□□ -0.64
NDEL1-207ENST00000580012 FAM236BA0A1B0GV22 79 aa11.03□□□□□ -0.64
NDEL1-207ENST00000580012 KRTAP9-8Q9BYQ0 159 aa11.03□□□□□ -0.64
NDEL1-207ENST00000580012 H3BPC8 53 aa11.01□□□□□ -0.65
NDEL1-207ENST00000580012 SMIM20Q8N5G0 67 aa10.98□□□□□ -0.65
NDEL1-207ENST00000580012 TRAV7A0A075B6U4 112 aa10.96□□□□□ -0.65
NDEL1-207ENST00000580012 KLKP1Q107X0 134 aa10.95□□□□□ -0.66
NDEL1-207ENST00000580012 MT2AP02795 61 aa10.88□□□□□ -0.67
NDEL1-207ENST00000580012 S4R3F8 94 aa10.83□□□□□ -0.68
NDEL1-207ENST00000580012 MT1FP04733 61 aa10.8□□□□□ -0.68
NDEL1-207ENST00000580012 LCA10Q71F78 164 aa10.8□□□□□ -0.68
NDEL1-207ENST00000580012 A8MUN3 132 aa10.79□□□□□ -0.68
NDEL1-207ENST00000580012 SERP2Q8N6R1 65 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms