RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 LINC00313P59037 77 aa7.07□□□□□ -1.28
GGA3-208ENST00000579743 ORMDL1Q9P0S3 153 aa7.07□□□□□ -1.28
GGA3-208ENST00000579743 TRBV7-4A0A0J9YYF1 115 aa7.05□□□□□ -1.28
GGA3-208ENST00000579743 TMEM256-PLSCR3K7ERE1 68 aa7.05□□□□□ -1.28
GGA3-208ENST00000579743 IGKV4-1P06312 121 aa7.05□□□□□ -1.28
GGA3-208ENST00000579743 DSCR10P59022 87 aa7.05□□□□□ -1.28
GGA3-208ENST00000579743 J3QR89 54 aa7.04□□□□□ -1.28
GGA3-208ENST00000579743 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
GGA3-208ENST00000579743 A0A1W2PNM2 257 aa7.03□□□□□ -1.28
GGA3-208ENST00000579743 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
GGA3-208ENST00000579743 CCKP06307 115 aa7□□□□□ -1.29
GGA3-208ENST00000579743 RBM12B-AS1Q9P1G2 102 aa7□□□□□ -1.29
GGA3-208ENST00000579743 A0A1B0GV72 72 aa6.99□□□□□ -1.29
GGA3-208ENST00000579743 BAALC-AS2P0C853 105 aa6.99□□□□□ -1.29
GGA3-208ENST00000579743 C21orf62-AS1Q17RA5 79 aa6.97□□□□□ -1.29
GGA3-208ENST00000579743 VPS25Q9BRG1 176 aa6.97□□□□□ -1.29
GGA3-208ENST00000579743 IGHV6-1A0A0B4J1U7 121 aa6.96□□□□□ -1.3
GGA3-208ENST00000579743 FAM240AA0A1B0GVK7 77 aa6.95□□□□□ -1.3
GGA3-208ENST00000579743 DSCR8Q96T75 97 aa6.95□□□□□ -1.3
GGA3-208ENST00000579743 C8orf87E5RJ46 101 aa6.94□□□□□ -1.3
GGA3-208ENST00000579743 DEFB116Q30KQ4 102 aa6.94□□□□□ -1.3
GGA3-208ENST00000579743 LINC00472Q9H8W2 130 aa6.94□□□□□ -1.3
GGA3-208ENST00000579743 FLGP20930 4061 aaPredicted RBP6.94□□□□□ -1.3
GGA3-208ENST00000579743 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
GGA3-208ENST00000579743 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
GGA3-208ENST00000579743 J3KT08 172 aa6.91□□□□□ -1.3
GGA3-208ENST00000579743 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.3
GGA3-208ENST00000579743 A0A1B0GVX0 72 aa6.89□□□□□ -1.31
GGA3-208ENST00000579743 JMJD7-PLA2G4BH0Y9G9 81 aa6.89□□□□□ -1.31
GGA3-208ENST00000579743 NDUFB1O75438 58 aa6.88□□□□□ -1.31
GGA3-208ENST00000579743 NOTCH2NLQ7Z3S9 236 aa6.88□□□□□ -1.31
GGA3-208ENST00000579743 C14orf132Q9NPU4 83 aa6.88□□□□□ -1.31
GGA3-208ENST00000579743 ACYP1P07311 99 aa6.87□□□□□ -1.31
GGA3-208ENST00000579743 HRES1P13985 223 aa6.85□□□□□ -1.31
GGA3-208ENST00000579743 LOC110117498A0A087WWA1 95 aa6.84□□□□□ -1.31
GGA3-208ENST00000579743 MPLKIPQ8TAP9 179 aa6.84□□□□□ -1.31
GGA3-208ENST00000579743 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
GGA3-208ENST00000579743 MT-ATP8P03928 68 aa6.82□□□□□ -1.32
GGA3-208ENST00000579743 A0A1B0GW54 56 aa6.81□□□□□ -1.32
GGA3-208ENST00000579743 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
GGA3-208ENST00000579743 Q6ZQT0 140 aa6.81□□□□□ -1.32
GGA3-208ENST00000579743 MT2AP02795 61 aa6.8□□□□□ -1.32
GGA3-208ENST00000579743 PDE6GP18545 87 aa6.79□□□□□ -1.32
GGA3-208ENST00000579743 SPINK7P58062 85 aa6.79□□□□□ -1.32
GGA3-208ENST00000579743 SCGB1A1P11684 91 aa6.77□□□□□ -1.33
GGA3-208ENST00000579743 LINC00643Q86TS7 51 aa6.77□□□□□ -1.33
GGA3-208ENST00000579743 LINC00846Q9NV44 126 aa6.77□□□□□ -1.33
GGA3-208ENST00000579743 A8MWP4 228 aa6.75□□□□□ -1.33
GGA3-208ENST00000579743 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
GGA3-208ENST00000579743 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
GGA3-208ENST00000579743 C8orf17Q9NRJ1 99 aa6.74□□□□□ -1.33
GGA3-208ENST00000579743 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
GGA3-208ENST00000579743 MT1FP04733 61 aa6.73□□□□□ -1.33
GGA3-208ENST00000579743 NREPQ16612 68 aa6.71□□□□□ -1.34
GGA3-208ENST00000579743 ATP5EP2Q5VTU8 51 aa6.71□□□□□ -1.34
GGA3-208ENST00000579743 WFDC13Q8IUB5 93 aa6.71□□□□□ -1.34
GGA3-208ENST00000579743 Q6ZVQ6 151 aa6.7□□□□□ -1.34
GGA3-208ENST00000579743 IMUPQ9GZP8 106 aa6.7□□□□□ -1.34
GGA3-208ENST00000579743 PCP4P48539 62 aa6.69□□□□□ -1.34
GGA3-208ENST00000579743 KRTAP9-3Q9BYQ3 159 aa6.69□□□□□ -1.34
GGA3-208ENST00000579743 IGKV3D-7A0A0C4DH55 119 aa6.68□□□□□ -1.34
GGA3-208ENST00000579743 UBL5Q9BZL1 73 aa6.68□□□□□ -1.34
GGA3-208ENST00000579743 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
GGA3-208ENST00000579743 LCE2BO14633 110 aa6.66□□□□□ -1.34
GGA3-208ENST00000579743 NDUFS5O43920 106 aa6.64□□□□□ -1.35
GGA3-208ENST00000579743 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
GGA3-208ENST00000579743 TMEM254Q8TBM7 123 aa6.64□□□□□ -1.35
GGA3-208ENST00000579743 MRPL34Q9BQ48 92 aaKnown RBP6.64□□□□□ -1.35
GGA3-208ENST00000579743 USH2AO75445 5202 aa6.63□□□□□ -1.35
GGA3-208ENST00000579743 hDV103S1A0JD37 113 aa6.61□□□□□ -1.35
GGA3-208ENST00000579743 HIST1H4AP62805 103 aaKnown RBP6.61□□□□□ -1.35
GGA3-208ENST00000579743 CXCL6P80162 114 aa6.61□□□□□ -1.35
GGA3-208ENST00000579743 SSPOA2VEC9 5147 aa6.6□□□□□ -1.35
GGA3-208ENST00000579743 FAM236AA0A1B0GUQ0 79 aa6.6□□□□□ -1.35
GGA3-208ENST00000579743 FAM236BA0A1B0GV22 79 aa6.6□□□□□ -1.35
GGA3-208ENST00000579743 H1FX-AS1Q4G0G2 97 aa6.59□□□□□ -1.35
GGA3-208ENST00000579743 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
GGA3-208ENST00000579743 A0A087WVE0 104 aa6.57□□□□□ -1.36
GGA3-208ENST00000579743 BPY2O14599 106 aa6.56□□□□□ -1.36
GGA3-208ENST00000579743 K7EQZ3 153 aa6.55□□□□□ -1.36
GGA3-208ENST00000579743 ANAPC13Q9BS18 74 aa6.55□□□□□ -1.36
GGA3-208ENST00000579743 IGKV2D-30A0A075B6S6 120 aa6.54□□□□□ -1.36
GGA3-208ENST00000579743 IGKV2-30P06310 120 aa6.54□□□□□ -1.36
GGA3-208ENST00000579743 C7orf65Q6ZTY9 151 aa6.54□□□□□ -1.36
GGA3-208ENST00000579743 ATOX1O00244 68 aa6.52□□□□□ -1.37
GGA3-208ENST00000579743 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
GGA3-208ENST00000579743 KRTAP19-6Q3LI70 58 aa6.51□□□□□ -1.37
GGA3-208ENST00000579743 CASC2Q6XLA1 102 aa6.49□□□□□ -1.37
GGA3-208ENST00000579743 Q8N9L7 120 aa6.48□□□□□ -1.37
GGA3-208ENST00000579743 HCG22E2RYF7 251 aa6.45□□□□□ -1.38
GGA3-208ENST00000579743 Q5W150 140 aa6.43□□□□□ -1.38
GGA3-208ENST00000579743 CCDC179H3BU77 68 aa6.42□□□□□ -1.38
GGA3-208ENST00000579743 COX7CP15954 63 aa6.42□□□□□ -1.38
GGA3-208ENST00000579743 SERP2Q8N6R1 65 aa6.42□□□□□ -1.38
GGA3-208ENST00000579743 C4orf26Q17RF5 130 aa6.41□□□□□ -1.38
GGA3-208ENST00000579743 UQCRQO14949 82 aa6.4□□□□□ -1.38
GGA3-208ENST00000579743 SMIM20Q8N5G0 67 aa6.39□□□□□ -1.39
GGA3-208ENST00000579743 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
GGA3-208ENST00000579743 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
GGA3-208ENST00000579743 OCR1Q9BZK8 76 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms