RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 KRTAP8-1Q8IUC2 63 aa3.47□□□□□ -1.85
SLC46A1-201ENST00000578217 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
SLC46A1-201ENST00000578217 HSBP1O75506 76 aa3.46□□□□□ -1.86
SLC46A1-201ENST00000578217 LEPROTL1O95214 131 aa3.46□□□□□ -1.86
SLC46A1-201ENST00000578217 FABP4P15090 132 aa3.46□□□□□ -1.86
SLC46A1-201ENST00000578217 H1FX-AS1Q4G0G2 97 aa3.46□□□□□ -1.86
SLC46A1-201ENST00000578217 TEN1Q86WV5 123 aa3.46□□□□□ -1.86
SLC46A1-201ENST00000578217 HSPB8Q9UJY1 196 aa3.46□□□□□ -1.86
SLC46A1-201ENST00000578217 MUSTN1Q8IVN3 82 aa3.44□□□□□ -1.86
SLC46A1-201ENST00000578217 SNHG12Q9BXW3 62 aa3.44□□□□□ -1.86
SLC46A1-201ENST00000578217 FAM236AA0A1B0GUQ0 79 aa3.42□□□□□ -1.86
SLC46A1-201ENST00000578217 FAM236BA0A1B0GV22 79 aa3.42□□□□□ -1.86
SLC46A1-201ENST00000578217 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.42□□□□□ -1.86
SLC46A1-201ENST00000578217 YPEL4Q96NS1 127 aa3.42□□□□□ -1.86
SLC46A1-201ENST00000578217 IMUPQ9GZP8 106 aa3.42□□□□□ -1.86
SLC46A1-201ENST00000578217 LINC00472Q9H8W2 130 aa3.41□□□□□ -1.86
SLC46A1-201ENST00000578217 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.86
SLC46A1-201ENST00000578217 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
SLC46A1-201ENST00000578217 VAMP3Q15836 100 aa3.39□□□□□ -1.87
SLC46A1-201ENST00000578217 C5orf47Q569G3 176 aa3.39□□□□□ -1.87
SLC46A1-201ENST00000578217 PPDPFLQ8WWR9 84 aa3.39□□□□□ -1.87
SLC46A1-201ENST00000578217 IFITM1P13164 125 aa3.38□□□□□ -1.87
SLC46A1-201ENST00000578217 NDUFV3P56181 108 aaKnown RBP3.38□□□□□ -1.87
SLC46A1-201ENST00000578217 MT1XP80297 61 aa3.38□□□□□ -1.87
SLC46A1-201ENST00000578217 UQCC3Q6UW78 93 aa3.38□□□□□ -1.87
SLC46A1-201ENST00000578217 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
SLC46A1-201ENST00000578217 CLLU1Q5K131 121 aa3.37□□□□□ -1.87
SLC46A1-201ENST00000578217 A0A1B0GVX0 72 aa3.36□□□□□ -1.87
SLC46A1-201ENST00000578217 SCGB1D4Q6XE38 83 aa3.36□□□□□ -1.87
SLC46A1-201ENST00000578217 H3BMG7 143 aa3.35□□□□□ -1.87
SLC46A1-201ENST00000578217 SYS1-DBNDD2H3BUS1 97 aa3.35□□□□□ -1.87
SLC46A1-201ENST00000578217 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
SLC46A1-201ENST00000578217 C8orf87E5RJ46 101 aa3.34□□□□□ -1.87
SLC46A1-201ENST00000578217 LINC01545Q5VT33 79 aa3.34□□□□□ -1.87
SLC46A1-201ENST00000578217 TRGC2P03986 189 aa3.33□□□□□ -1.88
SLC46A1-201ENST00000578217 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
SLC46A1-201ENST00000578217 A0A1B0GV72 72 aa3.32□□□□□ -1.88
SLC46A1-201ENST00000578217 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
SLC46A1-201ENST00000578217 C3orf79P0CE67 100 aa3.32□□□□□ -1.88
SLC46A1-201ENST00000578217 KLKP1Q107X0 134 aa3.32□□□□□ -1.88
SLC46A1-201ENST00000578217 COPS9Q8WXC6 57 aa3.32□□□□□ -1.88
SLC46A1-201ENST00000578217 RAB37Q96AX2 223 aa3.32□□□□□ -1.88
SLC46A1-201ENST00000578217 IGKV3D-7A0A0C4DH55 119 aa3.31□□□□□ -1.88
SLC46A1-201ENST00000578217 NDUFA5Q16718 116 aa3.31□□□□□ -1.88
SLC46A1-201ENST00000578217 TRBV7-4A0A0J9YYF1 115 aa3.3□□□□□ -1.88
SLC46A1-201ENST00000578217 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
SLC46A1-201ENST00000578217 C12orf57Q99622 126 aa3.3□□□□□ -1.88
SLC46A1-201ENST00000578217 RBM3P98179 157 aaKnown RBP3.29□□□□□ -1.88
SLC46A1-201ENST00000578217 LYRM7Q5U5X0 104 aa3.29□□□□□ -1.88
SLC46A1-201ENST00000578217 APOC3P02656 99 aa3.28□□□□□ -1.88
SLC46A1-201ENST00000578217 FABP2P12104 132 aa3.28□□□□□ -1.88
SLC46A1-201ENST00000578217 S100A1P23297 94 aa3.27□□□□□ -1.89
SLC46A1-201ENST00000578217 BVES-AS1Q5T3Y7 98 aa3.27□□□□□ -1.89
SLC46A1-201ENST00000578217 ATOH7Q8N100 152 aa3.27□□□□□ -1.89
SLC46A1-201ENST00000578217 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
SLC46A1-201ENST00000578217 C4orf26Q17RF5 130 aa3.26□□□□□ -1.89
SLC46A1-201ENST00000578217 PET117Q6UWS5 81 aa3.26□□□□□ -1.89
SLC46A1-201ENST00000578217 ANKRD29Q8N6D5 301 aa3.26□□□□□ -1.89
SLC46A1-201ENST00000578217 C8orf17Q9NRJ1 99 aa3.25□□□□□ -1.89
SLC46A1-201ENST00000578217 CCKP06307 115 aa3.24□□□□□ -1.89
SLC46A1-201ENST00000578217 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
SLC46A1-201ENST00000578217 LCA10Q71F78 164 aa3.24□□□□□ -1.89
SLC46A1-201ENST00000578217 TRACP01848 142 aa3.23□□□□□ -1.89
SLC46A1-201ENST00000578217 SNAPINO95295 136 aa3.22□□□□□ -1.89
SLC46A1-201ENST00000578217 MT4P47944 62 aa3.22□□□□□ -1.89
SLC46A1-201ENST00000578217 Q5W150 140 aa3.22□□□□□ -1.89
SLC46A1-201ENST00000578217 CSAG1Q6PB30 78 aa3.22□□□□□ -1.89
SLC46A1-201ENST00000578217 DSCR8Q96T75 97 aa3.22□□□□□ -1.89
SLC46A1-201ENST00000578217 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
SLC46A1-201ENST00000578217 Q6ZVQ6 151 aa3.21□□□□□ -1.9
SLC46A1-201ENST00000578217 S4R3F8 94 aa3.21□□□□□ -1.9
SLC46A1-201ENST00000578217 KRTDAPP60985 99 aa3.2□□□□□ -1.9
SLC46A1-201ENST00000578217 SVBPQ8N300 66 aa3.2□□□□□ -1.9
SLC46A1-201ENST00000578217 PRR15Q8IV56 129 aa3.18□□□□□ -1.9
SLC46A1-201ENST00000578217 VPS25Q9BRG1 176 aa3.18□□□□□ -1.9
SLC46A1-201ENST00000578217 H0YGX0 51 aa3.17□□□□□ -1.9
SLC46A1-201ENST00000578217 C7orf65Q6ZTY9 151 aa3.17□□□□□ -1.9
SLC46A1-201ENST00000578217 C2orf91Q6ZV80 131 aa3.17□□□□□ -1.9
SLC46A1-201ENST00000578217 J3KT08 172 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST1H2BKO60814 126 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST1H2BJP06899 126 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST1H2BOP23527 126 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST1H2BBP33778 126 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST1H2BDP58876 126 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST1H2BCP62807 126 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST2H2BEQ16778 126 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST1H2BHQ93079 126 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST1H2BNQ99877 126 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 HIST1H2BMQ99879 126 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 CRIPTQ9P021 101 aa3.16□□□□□ -1.9
SLC46A1-201ENST00000578217 MMP24-AS1A0A0U1RRL7 71 aa3.15□□□□□ -1.91
SLC46A1-201ENST00000578217 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
SLC46A1-201ENST00000578217 NDUFB1O75438 58 aa3.14□□□□□ -1.91
SLC46A1-201ENST00000578217 MRPL34Q9BQ48 92 aaKnown RBP3.14□□□□□ -1.91
SLC46A1-201ENST00000578217 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
SLC46A1-201ENST00000578217 SNCGO76070 127 aa3.13□□□□□ -1.91
SLC46A1-201ENST00000578217 Q6ZQT0 140 aa3.13□□□□□ -1.91
SLC46A1-201ENST00000578217 A0A087WVE0 104 aa3.12□□□□□ -1.91
SLC46A1-201ENST00000578217 A0A1B0GX51 115 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms