RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 TENM1Q9UKZ4 2725 aa6.52□□□□□ -1.37
RNF43-203ENST00000577716 A0A0D9SG42 100 aa6.5□□□□□ -1.37
RNF43-203ENST00000577716 KRTAP7-1Q8IUC3 87 aa6.5□□□□□ -1.37
RNF43-203ENST00000577716 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
RNF43-203ENST00000577716 VWFP04275 2813 aa6.48□□□□□ -1.37
RNF43-203ENST00000577716 A0A1B0GU33 70 aa6.48□□□□□ -1.37
RNF43-203ENST00000577716 KRTAP11-1Q8IUC1 163 aa6.48□□□□□ -1.37
RNF43-203ENST00000577716 TENM3Q9P273 2699 aa6.48□□□□□ -1.37
RNF43-203ENST00000577716 LINC00483Q53H64 154 aa6.48□□□□□ -1.37
RNF43-203ENST00000577716 Q6ZR54 194 aa6.47□□□□□ -1.37
RNF43-203ENST00000577716 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
RNF43-203ENST00000577716 PDZD2O15018 2839 aa6.43□□□□□ -1.38
RNF43-203ENST00000577716 OTOGQ6ZRI0 2925 aa6.43□□□□□ -1.38
RNF43-203ENST00000577716 A0A087X002 238 aa6.43□□□□□ -1.38
RNF43-203ENST00000577716 LCE6AA0A183 80 aa6.43□□□□□ -1.38
RNF43-203ENST00000577716 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
RNF43-203ENST00000577716 FBN1P35555 2871 aaKnown RBP6.42□□□□□ -1.38
RNF43-203ENST00000577716 KRTAP10-2P60368 255 aa6.42□□□□□ -1.38
RNF43-203ENST00000577716 DMAC1Q96GE9 116 aa6.42□□□□□ -1.38
RNF43-203ENST00000577716 BSNQ9UPA5 3926 aa6.42□□□□□ -1.38
RNF43-203ENST00000577716 KRTAP10-1P60331 282 aa6.41□□□□□ -1.38
RNF43-203ENST00000577716 LINC01554Q52M75 96 aa6.4□□□□□ -1.38
RNF43-203ENST00000577716 CSMD2Q7Z408 3487 aa6.39□□□□□ -1.39
RNF43-203ENST00000577716 J3QL48 77 aa6.39□□□□□ -1.39
RNF43-203ENST00000577716 NBPF19A0A087WUL8 3843 aa6.38□□□□□ -1.39
RNF43-203ENST00000577716 COX6B2Q6YFQ2 88 aa6.38□□□□□ -1.39
RNF43-203ENST00000577716 Q6ZRN7 208 aaPredicted RBP6.36□□□□□ -1.39
RNF43-203ENST00000577716 CSAG1Q6PB30 78 aa6.34□□□□□ -1.4
RNF43-203ENST00000577716 KRTAP13-1Q8IUC0 172 aa6.32□□□□□ -1.4
RNF43-203ENST00000577716 Q6ZSA8 131 aa6.31□□□□□ -1.4
RNF43-203ENST00000577716 ZFHX3Q15911 3703 aa6.31□□□□□ -1.4
RNF43-203ENST00000577716 A8MU10 97 aa6.28□□□□□ -1.4
RNF43-203ENST00000577716 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
RNF43-203ENST00000577716 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
RNF43-203ENST00000577716 S4R3F8 94 aa6.24□□□□□ -1.41
RNF43-203ENST00000577716 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
RNF43-203ENST00000577716 A6NN06 94 aa6.21□□□□□ -1.42
RNF43-203ENST00000577716 KRTAP13-2Q52LG2 175 aa6.21□□□□□ -1.42
RNF43-203ENST00000577716 H1FX-AS1Q4G0G2 97 aa6.21□□□□□ -1.42
RNF43-203ENST00000577716 RPL37P61927 97 aaKnown RBP6.2□□□□□ -1.42
RNF43-203ENST00000577716 H3BS24 57 aa6.19□□□□□ -1.42
RNF43-203ENST00000577716 TGP01266 2768 aa6.18□□□□□ -1.42
RNF43-203ENST00000577716 TENM2Q9NT68 2774 aa6.18□□□□□ -1.42
RNF43-203ENST00000577716 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
RNF43-203ENST00000577716 Q5VSD8 79 aa6.15□□□□□ -1.43
RNF43-203ENST00000577716 ROMO1P60602 79 aa6.13□□□□□ -1.43
RNF43-203ENST00000577716 TRRAPQ9Y4A5 3859 aa6.12□□□□□ -1.43
RNF43-203ENST00000577716 VPS13CQ709C8 3753 aa6.12□□□□□ -1.43
RNF43-203ENST00000577716 R4GN34 69 aa6.12□□□□□ -1.43
RNF43-203ENST00000577716 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
RNF43-203ENST00000577716 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
RNF43-203ENST00000577716 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.43
RNF43-203ENST00000577716 ANK3Q12955 4377 aaKnown RBP6.08□□□□□ -1.44
RNF43-203ENST00000577716 M0QZ58 72 aa6.03□□□□□ -1.44
RNF43-203ENST00000577716 SEC61BP60468 96 aaKnown RBP6.03□□□□□ -1.44
RNF43-203ENST00000577716 KRTAP25-1Q3LHN0 102 aa5.98□□□□□ -1.45
RNF43-203ENST00000577716 KRTAP1-4P0C5Y4 121 aa5.96□□□□□ -1.45
RNF43-203ENST00000577716 M0R2T5 61 aa5.96□□□□□ -1.46
RNF43-203ENST00000577716 A8MUU9 505 aa5.95□□□□□ -1.46
RNF43-203ENST00000577716 ZNF469Q96JG9 3925 aaPredicted RBP5.95□□□□□ -1.46
RNF43-203ENST00000577716 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
RNF43-203ENST00000577716 SRRM2Q9UQ35 2752 aaKnown RBP5.92□□□□□ -1.46
RNF43-203ENST00000577716 FBN3Q75N90 2809 aa5.89□□□□□ -1.47
RNF43-203ENST00000577716 KRTAP16-1A8MUX0 517 aa5.87□□□□□ -1.47
RNF43-203ENST00000577716 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
RNF43-203ENST00000577716 H0YAA0 97 aa5.81□□□□□ -1.48
RNF43-203ENST00000577716 KRTAP13-3Q3SY46 172 aa5.81□□□□□ -1.48
RNF43-203ENST00000577716 MEGF8Q7Z7M0 2845 aa5.8□□□□□ -1.48
RNF43-203ENST00000577716 KRTAP21-3Q3LHN1 58 aa5.79□□□□□ -1.48
RNF43-203ENST00000577716 NDUFAF8A1L188 74 aa5.74□□□□□ -1.49
RNF43-203ENST00000577716 XP32Q5T750 250 aa5.73□□□□□ -1.49
RNF43-203ENST00000577716 AKAP9Q99996 3911 aa5.72□□□□□ -1.49
RNF43-203ENST00000577716 COL7A1Q02388 2944 aa5.71□□□□□ -1.5
RNF43-203ENST00000577716 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
RNF43-203ENST00000577716 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
RNF43-203ENST00000577716 CSMD3Q7Z407 3707 aa5.64□□□□□ -1.51
RNF43-203ENST00000577716 P0C880 135 aa5.62□□□□□ -1.51
RNF43-203ENST00000577716 HUWE1Q7Z6Z7 4374 aaKnown RBP5.6□□□□□ -1.51
RNF43-203ENST00000577716 TNP1P09430 55 aa5.56□□□□□ -1.52
RNF43-203ENST00000577716 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
RNF43-203ENST00000577716 A0A1B0GVY2 172 aa5.52□□□□□ -1.53
RNF43-203ENST00000577716 KRTAP10-8P60410 259 aa5.52□□□□□ -1.53
RNF43-203ENST00000577716 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
RNF43-203ENST00000577716 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
RNF43-203ENST00000577716 DNAH9Q9NYC9 4486 aa5.42□□□□□ -1.54
RNF43-203ENST00000577716 KRTAP12-2P59991 146 aa5.4□□□□□ -1.54
RNF43-203ENST00000577716 PLECQ15149 4684 aaKnown RBP5.36□□□□□ -1.55
RNF43-203ENST00000577716 DNAH10Q8IVF4 4471 aa5.34□□□□□ -1.55
RNF43-203ENST00000577716 KRTAP12-1P59990 96 aa5.34□□□□□ -1.55
RNF43-203ENST00000577716 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
RNF43-203ENST00000577716 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
RNF43-203ENST00000577716 DNAH1Q9P2D7 4330 aa5.28□□□□□ -1.56
RNF43-203ENST00000577716 DNHD1Q96M86 4753 aa5.27□□□□□ -1.57
RNF43-203ENST00000577716 DNAH11Q96DT5 4516 aa5.26□□□□□ -1.57
RNF43-203ENST00000577716 KRTAP10-10P60014 251 aa5.25□□□□□ -1.57
RNF43-203ENST00000577716 KRTAP10-4P60372 401 aaPredicted RBP5.21□□□□□ -1.58
RNF43-203ENST00000577716 STARD9Q9P2P6 4700 aa5.2□□□□□ -1.58
RNF43-203ENST00000577716 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
RNF43-203ENST00000577716 VPS13DQ5THJ4 4388 aa5.19□□□□□ -1.58
RNF43-203ENST00000577716 ANK2Q01484 3957 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms