RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 COA5Q86WW8 74 aa8.46□□□□□ -1.05
RNF43-202ENST00000577625 PKD1P98161 4303 aa8.45□□□□□ -1.06
RNF43-202ENST00000577625 DNAH5Q8TE73 4624 aa8.45□□□□□ -1.06
RNF43-202ENST00000577625 DEFB116Q30KQ4 102 aa8.45□□□□□ -1.06
RNF43-202ENST00000577625 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
RNF43-202ENST00000577625 SACSQ9NZJ4 4579 aa8.44□□□□□ -1.06
RNF43-202ENST00000577625 KRTAP29-1A8MX34 341 aaPredicted RBP8.44□□□□□ -1.06
RNF43-202ENST00000577625 LINC01558Q9Y6Z2 57 aa8.43□□□□□ -1.06
RNF43-202ENST00000577625 DNAH8Q96JB1 4490 aa8.43□□□□□ -1.06
RNF43-202ENST00000577625 SPRR1BP22528 89 aa8.41□□□□□ -1.06
RNF43-202ENST00000577625 IGLV7-46A0A075B6I9 117 aa8.41□□□□□ -1.06
RNF43-202ENST00000577625 PSORS1C2Q9UIG4 136 aa8.39□□□□□ -1.07
RNF43-202ENST00000577625 IGLV8-61A0A075B6I0 122 aa8.38□□□□□ -1.07
RNF43-202ENST00000577625 KRTAP10-1P60331 282 aa8.38□□□□□ -1.07
RNF43-202ENST00000577625 CASC2Q6XLA1 102 aa8.38□□□□□ -1.07
RNF43-202ENST00000577625 Q6ZSA8 131 aa8.37□□□□□ -1.07
RNF43-202ENST00000577625 CIRBP-AS1Q8TBR5 109 aa8.36□□□□□ -1.07
RNF43-202ENST00000577625 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
RNF43-202ENST00000577625 SPAG11AQ6PDA7 123 aa8.34□□□□□ -1.08
RNF43-202ENST00000577625 SPINK7P58062 85 aa8.32□□□□□ -1.08
RNF43-202ENST00000577625 PKHD1P08F94 4074 aa8.32□□□□□ -1.08
RNF43-202ENST00000577625 ZNF861PO60384 105 aa8.32□□□□□ -1.08
RNF43-202ENST00000577625 LINC00313P59037 77 aa8.32□□□□□ -1.08
RNF43-202ENST00000577625 RPL37AP61513 92 aaKnown RBP8.32□□□□□ -1.08
RNF43-202ENST00000577625 A0A087WSZ3 146 aa8.31□□□□□ -1.08
RNF43-202ENST00000577625 ZNF706Q9Y5V0 76 aaPredicted RBP8.3□□□□□ -1.08
RNF43-202ENST00000577625 A0A0G2JQZ4 141 aa8.29□□□□□ -1.08
RNF43-202ENST00000577625 LINC00483Q53H64 154 aa8.29□□□□□ -1.08
RNF43-202ENST00000577625 H3BS24 57 aa8.29□□□□□ -1.08
RNF43-202ENST00000577625 A8MWP4 228 aa8.28□□□□□ -1.08
RNF43-202ENST00000577625 IGLV7-43P04211 117 aa8.28□□□□□ -1.08
RNF43-202ENST00000577625 LINC01554Q52M75 96 aa8.26□□□□□ -1.09
RNF43-202ENST00000577625 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
RNF43-202ENST00000577625 PLA2G1BP04054 148 aaKnown RBP8.24□□□□□ -1.09
RNF43-202ENST00000577625 ASB16-AS1Q495Z4 193 aa8.24□□□□□ -1.09
RNF43-202ENST00000577625 PCOTHQ58A44 107 aa8.24□□□□□ -1.09
RNF43-202ENST00000577625 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
RNF43-202ENST00000577625 RYR2Q92736 4967 aa8.23□□□□□ -1.09
RNF43-202ENST00000577625 KMT2CQ8NEZ4 4911 aaKnown RBP8.23□□□□□ -1.09
RNF43-202ENST00000577625 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
RNF43-202ENST00000577625 IGLV9-49A0A0B4J1Y8 123 aa8.21□□□□□ -1.09
RNF43-202ENST00000577625 HRES1P13985 223 aa8.2□□□□□ -1.1
RNF43-202ENST00000577625 LINC00472Q9H8W2 130 aa8.2□□□□□ -1.1
RNF43-202ENST00000577625 TP53AIP1Q9HCN2 124 aa8.2□□□□□ -1.1
RNF43-202ENST00000577625 MMP24-AS1A0A0U1RRL7 71 aa8.2□□□□□ -1.1
RNF43-202ENST00000577625 ANAPC11Q9NYG5 84 aa8.2□□□□□ -1.1
RNF43-202ENST00000577625 A0A087X002 238 aa8.18□□□□□ -1.1
RNF43-202ENST00000577625 VPS13BQ7Z7G8 4022 aa8.18□□□□□ -1.1
RNF43-202ENST00000577625 LCE2DQ5TA82 110 aaPredicted RBP8.17□□□□□ -1.1
RNF43-202ENST00000577625 DYNC1H1Q14204 4646 aaKnown RBP8.15□□□□□ -1.1
RNF43-202ENST00000577625 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.11
RNF43-202ENST00000577625 APOBP04114 4563 aaKnown RBP8.08□□□□□ -1.12
RNF43-202ENST00000577625 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
RNF43-202ENST00000577625 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
RNF43-202ENST00000577625 KRTAP1-4P0C5Y4 121 aa8.05□□□□□ -1.12
RNF43-202ENST00000577625 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
RNF43-202ENST00000577625 Q96NJ1 140 aa8.05□□□□□ -1.12
RNF43-202ENST00000577625 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
RNF43-202ENST00000577625 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
RNF43-202ENST00000577625 KRTAP13-2Q52LG2 175 aa8.04□□□□□ -1.12
RNF43-202ENST00000577625 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
RNF43-202ENST00000577625 C8orf17Q9NRJ1 99 aa8.03□□□□□ -1.12
RNF43-202ENST00000577625 RYR3Q15413 4870 aa8□□□□□ -1.13
RNF43-202ENST00000577625 ACYP2P14621 99 aa8□□□□□ -1.13
RNF43-202ENST00000577625 KRTAP10-4P60372 401 aaPredicted RBP8□□□□□ -1.13
RNF43-202ENST00000577625 SPINK6Q6UWN8 80 aa8□□□□□ -1.13
RNF43-202ENST00000577625 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
RNF43-202ENST00000577625 FAT1Q14517 4588 aa7.98□□□□□ -1.13
RNF43-202ENST00000577625 A0A1B0GU69 56 aa7.97□□□□□ -1.13
RNF43-202ENST00000577625 MRPL34Q9BQ48 92 aaKnown RBP7.96□□□□□ -1.14
RNF43-202ENST00000577625 CSAG1Q6PB30 78 aa7.95□□□□□ -1.14
RNF43-202ENST00000577625 A0A1B0GVX0 72 aa7.94□□□□□ -1.14
RNF43-202ENST00000577625 MIR22HGQ0VDD5 57 aa7.94□□□□□ -1.14
RNF43-202ENST00000577625 IGHV6-1A0A0B4J1U7 121 aa7.92□□□□□ -1.14
RNF43-202ENST00000577625 UQCR11O14957 56 aa7.92□□□□□ -1.14
RNF43-202ENST00000577625 CDK2AP2O75956 126 aa7.92□□□□□ -1.14
RNF43-202ENST00000577625 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
RNF43-202ENST00000577625 HSPG2P98160 4391 aa7.89□□□□□ -1.15
RNF43-202ENST00000577625 DMAC1Q96GE9 116 aa7.88□□□□□ -1.15
RNF43-202ENST00000577625 PKHD1L1Q86WI1 4243 aa7.87□□□□□ -1.15
RNF43-202ENST00000577625 KRTAP13-3Q3SY46 172 aa7.86□□□□□ -1.15
RNF43-202ENST00000577625 SPINK1P00995 79 aa7.84□□□□□ -1.15
RNF43-202ENST00000577625 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
RNF43-202ENST00000577625 Q5W150 140 aa7.83□□□□□ -1.16
RNF43-202ENST00000577625 NOTCH2NLQ7Z3S9 236 aa7.83□□□□□ -1.16
RNF43-202ENST00000577625 Q5VSD8 79 aa7.81□□□□□ -1.16
RNF43-202ENST00000577625 LINC00304Q8N9R0 145 aa7.81□□□□□ -1.16
RNF43-202ENST00000577625 RPS29P62273 56 aaKnown RBP7.8□□□□□ -1.16
RNF43-202ENST00000577625 KRTAP17-1Q9BYP8 105 aa7.77□□□□□ -1.17
RNF43-202ENST00000577625 RYR1P21817 5038 aa7.77□□□□□ -1.17
RNF43-202ENST00000577625 ROMO1P60602 79 aa7.72□□□□□ -1.17
RNF43-202ENST00000577625 FLG2Q5D862 2391 aaPredicted RBP7.72□□□□□ -1.17
RNF43-202ENST00000577625 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
RNF43-202ENST00000577625 EPPK1P58107 5090 aaKnown RBP7.71□□□□□ -1.17
RNF43-202ENST00000577625 LRP1Q07954 4544 aaKnown RBP7.69□□□□□ -1.18
RNF43-202ENST00000577625 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
RNF43-202ENST00000577625 TNXBP22105 4242 aa7.68□□□□□ -1.18
RNF43-202ENST00000577625 KRTAP16-1A8MUX0 517 aa7.67□□□□□ -1.18
RNF43-202ENST00000577625 Q8N1X5 172 aa7.67□□□□□ -1.18
RNF43-202ENST00000577625 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms