RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 H3BQ85 93 aa5.92□□□□□ -1.46
CDH8-202ENST00000577228 MT1FP04733 61 aa5.92□□□□□ -1.46
CDH8-202ENST00000577228 UBE2V1Q13404 147 aa5.92□□□□□ -1.46
CDH8-202ENST00000577228 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
CDH8-202ENST00000577228 SPCS1Q9Y6A9 102 aa5.92□□□□□ -1.46
CDH8-202ENST00000577228 LCE2BO14633 110 aa5.91□□□□□ -1.46
CDH8-202ENST00000577228 SIGMAR1Q99720 223 aa5.91□□□□□ -1.46
CDH8-202ENST00000577228 MTURNQ8N3F0 131 aa5.9□□□□□ -1.46
CDH8-202ENST00000577228 ANKRD29Q8N6D5 301 aa5.9□□□□□ -1.46
CDH8-202ENST00000577228 KRTAP16-1A8MUX0 517 aa5.89□□□□□ -1.47
CDH8-202ENST00000577228 K7EP34 96 aa5.89□□□□□ -1.47
CDH8-202ENST00000577228 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
CDH8-202ENST00000577228 RBM12B-AS1Q9P1G2 102 aa5.89□□□□□ -1.47
CDH8-202ENST00000577228 HRES1P13985 223 aa5.87□□□□□ -1.47
CDH8-202ENST00000577228 LINC00313P59037 77 aa5.87□□□□□ -1.47
CDH8-202ENST00000577228 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
CDH8-202ENST00000577228 A0A1W2PNM2 257 aa5.86□□□□□ -1.47
CDH8-202ENST00000577228 H3BT86 120 aa5.86□□□□□ -1.47
CDH8-202ENST00000577228 SMCPP49901 116 aaPredicted RBP5.86□□□□□ -1.47
CDH8-202ENST00000577228 MPLKIPQ8TAP9 179 aa5.86□□□□□ -1.47
CDH8-202ENST00000577228 PRO0461Q9UI25 63 aa5.85□□□□□ -1.47
CDH8-202ENST00000577228 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
CDH8-202ENST00000577228 SYNE2Q8WXH0 6885 aaKnown RBP5.85□□□□□ -1.47
CDH8-202ENST00000577228 TRBV7-4A0A0J9YYF1 115 aa5.84□□□□□ -1.47
CDH8-202ENST00000577228 IGKV4-1P06312 121 aa5.84□□□□□ -1.47
CDH8-202ENST00000577228 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
CDH8-202ENST00000577228 JMJD7-PLA2G4BH0Y9G9 81 aa5.82□□□□□ -1.48
CDH8-202ENST00000577228 GTF2H5Q6ZYL4 71 aa5.82□□□□□ -1.48
CDH8-202ENST00000577228 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
CDH8-202ENST00000577228 DSCR8Q96T75 97 aa5.82□□□□□ -1.48
CDH8-202ENST00000577228 CCKP06307 115 aa5.81□□□□□ -1.48
CDH8-202ENST00000577228 C14orf132Q9NPU4 83 aa5.81□□□□□ -1.48
CDH8-202ENST00000577228 Q6ZQT0 140 aa5.8□□□□□ -1.48
CDH8-202ENST00000577228 LINC00846Q9NV44 126 aa5.8□□□□□ -1.48
CDH8-202ENST00000577228 LOC110117498A0A087WWA1 95 aa5.79□□□□□ -1.48
CDH8-202ENST00000577228 A0A1B0GV90 55 aa5.79□□□□□ -1.48
CDH8-202ENST00000577228 IGHV6-1A0A0B4J1U7 121 aa5.78□□□□□ -1.48
CDH8-202ENST00000577228 DEFB116Q30KQ4 102 aa5.78□□□□□ -1.48
CDH8-202ENST00000577228 VPS25Q9BRG1 176 aa5.78□□□□□ -1.48
CDH8-202ENST00000577228 F8W1H4 67 aa5.76□□□□□ -1.49
CDH8-202ENST00000577228 LINC00472Q9H8W2 130 aa5.76□□□□□ -1.49
CDH8-202ENST00000577228 PDE6GP18545 87 aa5.75□□□□□ -1.49
CDH8-202ENST00000577228 KRTAP19-6Q3LI70 58 aa5.75□□□□□ -1.49
CDH8-202ENST00000577228 C8orf87E5RJ46 101 aa5.73□□□□□ -1.49
CDH8-202ENST00000577228 ETDBQ3ZM63 59 aa5.72□□□□□ -1.49
CDH8-202ENST00000577228 ZCCHC13Q8WW36 166 aaKnown RBP5.72□□□□□ -1.49
CDH8-202ENST00000577228 A0A1B0GVX0 72 aa5.71□□□□□ -1.5
CDH8-202ENST00000577228 SPINK7P58062 85 aa5.7□□□□□ -1.5
CDH8-202ENST00000577228 A0A1B0GW54 56 aa5.69□□□□□ -1.5
CDH8-202ENST00000577228 A8MWP4 228 aa5.69□□□□□ -1.5
CDH8-202ENST00000577228 C21orf62-AS1Q17RA5 79 aa5.69□□□□□ -1.5
CDH8-202ENST00000577228 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
CDH8-202ENST00000577228 NREPQ16612 68 aa5.64□□□□□ -1.51
CDH8-202ENST00000577228 Q8N9P0 234 aaPredicted RBP5.64□□□□□ -1.51
CDH8-202ENST00000577228 J3KT08 172 aa5.63□□□□□ -1.51
CDH8-202ENST00000577228 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
CDH8-202ENST00000577228 Q6ZVQ6 151 aa5.62□□□□□ -1.51
CDH8-202ENST00000577228 NDUFB1O75438 58 aa5.6□□□□□ -1.51
CDH8-202ENST00000577228 IGKV3D-7A0A0C4DH55 119 aa5.58□□□□□ -1.52
CDH8-202ENST00000577228 C8orf17Q9NRJ1 99 aa5.58□□□□□ -1.52
CDH8-202ENST00000577228 UBL5Q9BZL1 73 aa5.57□□□□□ -1.52
CDH8-202ENST00000577228 BPY2O14599 106 aa5.56□□□□□ -1.52
CDH8-202ENST00000577228 FAM240AA0A1B0GVK7 77 aa5.55□□□□□ -1.52
CDH8-202ENST00000577228 K7EQZ3 153 aa5.55□□□□□ -1.52
CDH8-202ENST00000577228 PRR15Q8IV56 129 aa5.55□□□□□ -1.52
CDH8-202ENST00000577228 NEBP20929 6669 aa5.55□□□□□ -1.52
CDH8-202ENST00000577228 ACYP1P07311 99 aa5.54□□□□□ -1.52
CDH8-202ENST00000577228 H1FX-AS1Q4G0G2 97 aa5.54□□□□□ -1.52
CDH8-202ENST00000577228 Q8N9L7 120 aa5.54□□□□□ -1.52
CDH8-202ENST00000577228 MMP24-AS1A0A0U1RRL7 71 aa5.51□□□□□ -1.53
CDH8-202ENST00000577228 CXCL6P80162 114 aa5.48□□□□□ -1.53
CDH8-202ENST00000577228 J3QR89 54 aa5.46□□□□□ -1.54
CDH8-202ENST00000577228 TMEM254Q8TBM7 123 aa5.46□□□□□ -1.54
CDH8-202ENST00000577228 MRPL34Q9BQ48 92 aaKnown RBP5.46□□□□□ -1.54
CDH8-202ENST00000577228 hDV103S1A0JD37 113 aa5.45□□□□□ -1.54
CDH8-202ENST00000577228 LINC00643Q86TS7 51 aa5.44□□□□□ -1.54
CDH8-202ENST00000577228 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
CDH8-202ENST00000577228 NDUFS5O43920 106 aa5.43□□□□□ -1.54
CDH8-202ENST00000577228 IGKV2-30P06310 120 aa5.43□□□□□ -1.54
CDH8-202ENST00000577228 ATP5EP2Q5VTU8 51 aa5.43□□□□□ -1.54
CDH8-202ENST00000577228 CASC2Q6XLA1 102 aa5.43□□□□□ -1.54
CDH8-202ENST00000577228 HCG22E2RYF7 251 aa5.42□□□□□ -1.54
CDH8-202ENST00000577228 A6NN06 94 aa5.41□□□□□ -1.54
CDH8-202ENST00000577228 C7orf65Q6ZTY9 151 aa5.41□□□□□ -1.54
CDH8-202ENST00000577228 K7ERU9 68 aa5.4□□□□□ -1.54
CDH8-202ENST00000577228 HIST1H4AP62805 103 aaKnown RBP5.38□□□□□ -1.55
CDH8-202ENST00000577228 A0A087WVE0 104 aa5.37□□□□□ -1.55
CDH8-202ENST00000577228 FAM236AA0A1B0GUQ0 79 aa5.37□□□□□ -1.55
CDH8-202ENST00000577228 FAM236BA0A1B0GV22 79 aa5.37□□□□□ -1.55
CDH8-202ENST00000577228 Q5W150 140 aa5.37□□□□□ -1.55
CDH8-202ENST00000577228 MT1BP07438 61 aa5.36□□□□□ -1.55
CDH8-202ENST00000577228 C4orf26Q17RF5 130 aa5.35□□□□□ -1.55
CDH8-202ENST00000577228 C5orf47Q569G3 176 aa5.35□□□□□ -1.55
CDH8-202ENST00000577228 Q5VV11 94 aa5.35□□□□□ -1.55
CDH8-202ENST00000577228 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.55
CDH8-202ENST00000577228 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.55
CDH8-202ENST00000577228 MT-ATP8P03928 68 aa5.32□□□□□ -1.56
CDH8-202ENST00000577228 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
CDH8-202ENST00000577228 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
CDH8-202ENST00000577228 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms