RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 Q75L30 129 aa10.85□□□□□ -0.67
ATPAF1-214ENST00000576409 LCA10Q71F78 164 aa10.83□□□□□ -0.68
ATPAF1-214ENST00000576409 ZCCHC13Q8WW36 166 aaKnown RBP10.83□□□□□ -0.68
ATPAF1-214ENST00000576409 KRTAP29-1A8MX34 341 aaPredicted RBP10.8□□□□□ -0.68
ATPAF1-214ENST00000576409 SPRR1BP22528 89 aa10.8□□□□□ -0.68
ATPAF1-214ENST00000576409 OTOGQ6ZRI0 2925 aa10.79□□□□□ -0.68
ATPAF1-214ENST00000576409 LINC01558Q9Y6Z2 57 aa10.79□□□□□ -0.68
ATPAF1-214ENST00000576409 A0A087X002 238 aa10.78□□□□□ -0.68
ATPAF1-214ENST00000576409 NOTCH2NLQ7Z3S9 236 aa10.78□□□□□ -0.68
ATPAF1-214ENST00000576409 TENM2Q9NT68 2774 aa10.78□□□□□ -0.68
ATPAF1-214ENST00000576409 LINC00304Q8N9R0 145 aa10.76□□□□□ -0.69
ATPAF1-214ENST00000576409 ZFHX3Q15911 3703 aa10.75□□□□□ -0.69
ATPAF1-214ENST00000576409 WWC2-AS2Q96NR7 200 aa10.75□□□□□ -0.69
ATPAF1-214ENST00000576409 NBPF19A0A087WUL8 3843 aa10.69□□□□□ -0.7
ATPAF1-214ENST00000576409 Q5W150 140 aa10.69□□□□□ -0.7
ATPAF1-214ENST00000576409 TGP01266 2768 aa10.69□□□□□ -0.7
ATPAF1-214ENST00000576409 A0A0D9SG42 100 aa10.68□□□□□ -0.7
ATPAF1-214ENST00000576409 SPINT4Q6UDR6 99 aa10.65□□□□□ -0.7
ATPAF1-214ENST00000576409 BSNQ9UPA5 3926 aa10.65□□□□□ -0.71
ATPAF1-214ENST00000576409 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
ATPAF1-214ENST00000576409 CRIPTQ9P021 101 aa10.6□□□□□ -0.71
ATPAF1-214ENST00000576409 LCE6AA0A183 80 aa10.58□□□□□ -0.72
ATPAF1-214ENST00000576409 H3BS24 57 aa10.58□□□□□ -0.72
ATPAF1-214ENST00000576409 LINC01554Q52M75 96 aa10.54□□□□□ -0.72
ATPAF1-214ENST00000576409 CSAG1Q6PB30 78 aa10.53□□□□□ -0.72
ATPAF1-214ENST00000576409 SRRM2Q9UQ35 2752 aaKnown RBP10.53□□□□□ -0.72
ATPAF1-214ENST00000576409 Q6ZR54 194 aa10.53□□□□□ -0.72
ATPAF1-214ENST00000576409 KRTAP10-2P60368 255 aa10.52□□□□□ -0.73
ATPAF1-214ENST00000576409 A0A1B0GU33 70 aa10.5□□□□□ -0.73
ATPAF1-214ENST00000576409 VPS13CQ709C8 3753 aa10.45□□□□□ -0.74
ATPAF1-214ENST00000576409 LINC00483Q53H64 154 aa10.44□□□□□ -0.74
ATPAF1-214ENST00000576409 ADM2Q7Z4H4 148 aa10.44□□□□□ -0.74
ATPAF1-214ENST00000576409 DMAC1Q96GE9 116 aa10.42□□□□□ -0.74
ATPAF1-214ENST00000576409 KRTAP10-1P60331 282 aa10.42□□□□□ -0.74
ATPAF1-214ENST00000576409 Q6ZRN7 208 aaPredicted RBP10.36□□□□□ -0.75
ATPAF1-214ENST00000576409 TRRAPQ9Y4A5 3859 aa10.35□□□□□ -0.75
ATPAF1-214ENST00000576409 A6NN06 94 aa10.34□□□□□ -0.75
ATPAF1-214ENST00000576409 KRTAP13-1Q8IUC0 172 aa10.32□□□□□ -0.76
ATPAF1-214ENST00000576409 FBN3Q75N90 2809 aa10.3□□□□□ -0.76
ATPAF1-214ENST00000576409 SPATA8Q6RVD6 105 aa10.27□□□□□ -0.76
ATPAF1-214ENST00000576409 KRTAP13-2Q52LG2 175 aa10.19□□□□□ -0.78
ATPAF1-214ENST00000576409 COL7A1Q02388 2944 aa10.13□□□□□ -0.79
ATPAF1-214ENST00000576409 H1FX-AS1Q4G0G2 97 aa10.06□□□□□ -0.8
ATPAF1-214ENST00000576409 COX6B2Q6YFQ2 88 aa10.05□□□□□ -0.8
ATPAF1-214ENST00000576409 Q6ZSA8 131 aa10□□□□□ -0.81
ATPAF1-214ENST00000576409 RPL37P61927 97 aaKnown RBP10□□□□□ -0.81
ATPAF1-214ENST00000576409 MEGF8Q7Z7M0 2845 aa9.99□□□□□ -0.81
ATPAF1-214ENST00000576409 ASB16-AS1Q495Z4 193 aa9.97□□□□□ -0.81
ATPAF1-214ENST00000576409 S4R3F8 94 aa9.97□□□□□ -0.81
ATPAF1-214ENST00000576409 CSMD3Q7Z407 3707 aa9.96□□□□□ -0.81
ATPAF1-214ENST00000576409 J3QL48 77 aa9.96□□□□□ -0.82
ATPAF1-214ENST00000576409 ZNF469Q96JG9 3925 aaPredicted RBP9.95□□□□□ -0.82
ATPAF1-214ENST00000576409 ROMO1P60602 79 aa9.91□□□□□ -0.82
ATPAF1-214ENST00000576409 KRTAP25-1Q3LHN0 102 aa9.82□□□□□ -0.84
ATPAF1-214ENST00000576409 CAMK2N1Q7Z7J9 78 aa9.82□□□□□ -0.84
ATPAF1-214ENST00000576409 Q5VSD8 79 aa9.8□□□□□ -0.84
ATPAF1-214ENST00000576409 R4GN34 69 aa9.79□□□□□ -0.84
ATPAF1-214ENST00000576409 ANK3Q12955 4377 aaKnown RBP9.76□□□□□ -0.85
ATPAF1-214ENST00000576409 KRTAP1-4P0C5Y4 121 aa9.76□□□□□ -0.85
ATPAF1-214ENST00000576409 M0QZ58 72 aa9.71□□□□□ -0.85
ATPAF1-214ENST00000576409 LUZP6Q538Z0 58 aa9.7□□□□□ -0.86
ATPAF1-214ENST00000576409 H0YAA0 97 aa9.67□□□□□ -0.86
ATPAF1-214ENST00000576409 KRTAP16-1A8MUX0 517 aa9.65□□□□□ -0.86
ATPAF1-214ENST00000576409 A8MUU9 505 aa9.64□□□□□ -0.87
ATPAF1-214ENST00000576409 KRTAP13-3Q3SY46 172 aa9.63□□□□□ -0.87
ATPAF1-214ENST00000576409 C10orf95Q9H7T3 257 aa9.6□□□□□ -0.87
ATPAF1-214ENST00000576409 NDUFAF8A1L188 74 aa9.58□□□□□ -0.88
ATPAF1-214ENST00000576409 RPS29P62273 56 aaKnown RBP9.55□□□□□ -0.88
ATPAF1-214ENST00000576409 C20orf166-AS1Q96NR2 134 aa9.55□□□□□ -0.88
ATPAF1-214ENST00000576409 AKAP9Q99996 3911 aa9.49□□□□□ -0.89
ATPAF1-214ENST00000576409 M0R2T5 61 aa9.42□□□□□ -0.9
ATPAF1-214ENST00000576409 SEC61BP60468 96 aaKnown RBP9.38□□□□□ -0.91
ATPAF1-214ENST00000576409 P0C880 135 aa9.35□□□□□ -0.91
ATPAF1-214ENST00000576409 XP32Q5T750 250 aa9.28□□□□□ -0.92
ATPAF1-214ENST00000576409 A0A0A0MQY5 61 aa9.23□□□□□ -0.93
ATPAF1-214ENST00000576409 KRTAP3-1Q9BYR8 98 aa9.2□□□□□ -0.94
ATPAF1-214ENST00000576409 HUWE1Q7Z6Z7 4374 aaKnown RBP9.05□□□□□ -0.96
ATPAF1-214ENST00000576409 KRTAP10-8P60410 259 aa9.03□□□□□ -0.96
ATPAF1-214ENST00000576409 KRTAP12-2P59991 146 aa9□□□□□ -0.97
ATPAF1-214ENST00000576409 PLAC4Q8WY50 150 aa9□□□□□ -0.97
ATPAF1-214ENST00000576409 TPRXLQ17RH7 258 aa8.98□□□□□ -0.97
ATPAF1-214ENST00000576409 KRTAP13-4Q3LI77 160 aa8.97□□□□□ -0.97
ATPAF1-214ENST00000576409 DNAH10Q8IVF4 4471 aa8.96□□□□□ -0.97
ATPAF1-214ENST00000576409 A0A1B0GVY2 172 aa8.96□□□□□ -0.98
ATPAF1-214ENST00000576409 KRTAP10-6P60371 365 aaPredicted RBP8.86□□□□□ -0.99
ATPAF1-214ENST00000576409 TNP1P09430 55 aa8.83□□□□□ -1
ATPAF1-214ENST00000576409 KRTAP12-1P59990 96 aa8.82□□□□□ -1
ATPAF1-214ENST00000576409 PLECQ15149 4684 aaKnown RBP8.76□□□□□ -1.01
ATPAF1-214ENST00000576409 DNAH11Q96DT5 4516 aa8.76□□□□□ -1.01
ATPAF1-214ENST00000576409 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
ATPAF1-214ENST00000576409 DNAH9Q9NYC9 4486 aa8.66□□□□□ -1.02
ATPAF1-214ENST00000576409 ANK2Q01484 3957 aa8.65□□□□□ -1.02
ATPAF1-214ENST00000576409 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
ATPAF1-214ENST00000576409 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
ATPAF1-214ENST00000576409 DNAH1Q9P2D7 4330 aa8.61□□□□□ -1.03
ATPAF1-214ENST00000576409 DNHD1Q96M86 4753 aa8.6□□□□□ -1.03
ATPAF1-214ENST00000576409 PP632Q6XCG6 107 aa8.6□□□□□ -1.03
ATPAF1-214ENST00000576409 DNAH5Q8TE73 4624 aa8.53□□□□□ -1.04
ATPAF1-214ENST00000576409 DNAH8Q96JB1 4490 aa8.53□□□□□ -1.04
ATPAF1-214ENST00000576409 FAT1Q14517 4588 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms