RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 LYSTQ99698 3801 aa0.9□□□□□ -2.26
CALCOCO2-226ENST00000575461 NRAPQ86VF7 1730 aa0.9□□□□□ -2.27
CALCOCO2-226ENST00000575461 SPRR1BP22528 89 aa0.9□□□□□ -2.27
CALCOCO2-226ENST00000575461 URB1O60287 2271 aaKnown RBP0.9□□□□□ -2.27
CALCOCO2-226ENST00000575461 STARD9Q9P2P6 4700 aa0.9□□□□□ -2.27
CALCOCO2-226ENST00000575461 COL14A1Q05707 1796 aaKnown RBP0.89□□□□□ -2.27
CALCOCO2-226ENST00000575461 NMSQ5H8A3 153 aa0.89□□□□□ -2.27
CALCOCO2-226ENST00000575461 KNL1Q8NG31 2342 aa0.89□□□□□ -2.27
CALCOCO2-226ENST00000575461 CLIP1P30622 1438 aa0.89□□□□□ -2.27
CALCOCO2-226ENST00000575461 LY75O60449 1722 aa0.88□□□□□ -2.27
CALCOCO2-226ENST00000575461 DOT1LQ8TEK3 1739 aa0.88□□□□□ -2.27
CALCOCO2-226ENST00000575461 ATP7BP35670 1465 aa0.87□□□□□ -2.27
CALCOCO2-226ENST00000575461 LRRIQ1Q96JM4 1722 aa0.87□□□□□ -2.27
CALCOCO2-226ENST00000575461 PKHD1L1Q86WI1 4243 aa0.87□□□□□ -2.27
CALCOCO2-226ENST00000575461 IGLC2P0DOY2 106 aa0.87□□□□□ -2.27
CALCOCO2-226ENST00000575461 IGLC3P0DOY3 106 aa0.87□□□□□ -2.27
CALCOCO2-226ENST00000575461 AGLP35573 1532 aa0.87□□□□□ -2.27
CALCOCO2-226ENST00000575461 APOBP04114 4563 aaKnown RBP0.86□□□□□ -2.27
CALCOCO2-226ENST00000575461 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
CALCOCO2-226ENST00000575461 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
CALCOCO2-226ENST00000575461 SNRPFP62306 86 aaKnown RBP0.86□□□□□ -2.27
CALCOCO2-226ENST00000575461 HUWE1Q7Z6Z7 4374 aaKnown RBP0.86□□□□□ -2.27
CALCOCO2-226ENST00000575461 NKTRP30414 1462 aaKnown RBP0.86□□□□□ -2.27
CALCOCO2-226ENST00000575461 CCDC18Q5T9S5 1454 aa0.86□□□□□ -2.27
CALCOCO2-226ENST00000575461 PPLO60437 1756 aa0.85□□□□□ -2.27
CALCOCO2-226ENST00000575461 ERICH3Q5RHP9 1530 aa0.85□□□□□ -2.27
CALCOCO2-226ENST00000575461 CRIPTQ9P021 101 aa0.85□□□□□ -2.27
CALCOCO2-226ENST00000575461 WNK2Q9Y3S1 2297 aa0.85□□□□□ -2.27
CALCOCO2-226ENST00000575461 DNAH10Q8IVF4 4471 aa0.85□□□□□ -2.27
CALCOCO2-226ENST00000575461 UACAQ9BZF9 1416 aa0.84□□□□□ -2.27
CALCOCO2-226ENST00000575461 DNAH5Q8TE73 4624 aa0.84□□□□□ -2.28
CALCOCO2-226ENST00000575461 PLGLAQ15195 96 aa0.83□□□□□ -2.28
CALCOCO2-226ENST00000575461 NCOA2Q15596 1464 aa0.83□□□□□ -2.28
CALCOCO2-226ENST00000575461 HRNRQ86YZ3 2850 aaPredicted RBP0.82□□□□□ -2.28
CALCOCO2-226ENST00000575461 PTPN23Q9H3S7 1636 aa0.82□□□□□ -2.28
CALCOCO2-226ENST00000575461 RGPD8O14715 1765 aaPredicted RBP0.81□□□□□ -2.28
CALCOCO2-226ENST00000575461 RGPD5Q99666 1765 aa0.81□□□□□ -2.28
CALCOCO2-226ENST00000575461 TOP2AP11388 1531 aaKnown RBP0.8□□□□□ -2.28
CALCOCO2-226ENST00000575461 ABCA9Q8IUA7 1624 aa0.8□□□□□ -2.28
CALCOCO2-226ENST00000575461 DNAH11Q96DT5 4516 aa0.8□□□□□ -2.28
CALCOCO2-226ENST00000575461 IQCF6A8MYZ5 107 aa0.8□□□□□ -2.28
CALCOCO2-226ENST00000575461 PARP4Q9UKK3 1724 aaKnown RBP0.79□□□□□ -2.28
CALCOCO2-226ENST00000575461 LCE6AA0A183 80 aa0.79□□□□□ -2.28
CALCOCO2-226ENST00000575461 LINC00643Q86TS7 51 aa0.79□□□□□ -2.28
CALCOCO2-226ENST00000575461 KIF20BQ96Q89 1820 aa0.79□□□□□ -2.28
CALCOCO2-226ENST00000575461 LMO7Q8WWI1 1683 aa0.78□□□□□ -2.28
CALCOCO2-226ENST00000575461 TOGARAM1Q9Y4F4 1720 aa0.78□□□□□ -2.28
CALCOCO2-226ENST00000575461 ALS2Q96Q42 1657 aa0.78□□□□□ -2.29
CALCOCO2-226ENST00000575461 DNAH6Q9C0G6 4158 aa0.78□□□□□ -2.29
CALCOCO2-226ENST00000575461 VPS13DQ5THJ4 4388 aa0.78□□□□□ -2.29
CALCOCO2-226ENST00000575461 MYMXA0A1B0GTQ4 84 aa0.77□□□□□ -2.29
CALCOCO2-226ENST00000575461 A0A1B0GUT8 65 aa0.77□□□□□ -2.29
CALCOCO2-226ENST00000575461 I3L3M4 83 aa0.77□□□□□ -2.29
CALCOCO2-226ENST00000575461 DDX60LQ5H9U9 1706 aaKnown RBP0.76□□□□□ -2.29
CALCOCO2-226ENST00000575461 INO80Q9ULG1 1556 aaPredicted RBP0.76□□□□□ -2.29
CALCOCO2-226ENST00000575461 DEFB112Q30KQ8 113 aa0.76□□□□□ -2.29
CALCOCO2-226ENST00000575461 DDX60Q8IY21 1712 aaKnown RBP0.75□□□□□ -2.29
CALCOCO2-226ENST00000575461 ACYP1P07311 99 aa0.75□□□□□ -2.29
CALCOCO2-226ENST00000575461 PLXNC1O60486 1568 aa0.74□□□□□ -2.29
CALCOCO2-226ENST00000575461 CPSF4LA6NMK7 179 aaKnown RBP0.74□□□□□ -2.29
CALCOCO2-226ENST00000575461 SPINK4O60575 86 aa0.74□□□□□ -2.29
CALCOCO2-226ENST00000575461 TDRG1Q3Y452 100 aa0.74□□□□□ -2.29
CALCOCO2-226ENST00000575461 DNAH3Q8TD57 4116 aa0.74□□□□□ -2.29
CALCOCO2-226ENST00000575461 MYO5CQ9NQX4 1742 aa0.73□□□□□ -2.29
CALCOCO2-226ENST00000575461 SPTY2D1-AS1A0A0U1RR47 76 aa0.73□□□□□ -2.29
CALCOCO2-226ENST00000575461 KRTAP19-6Q3LI70 58 aa0.73□□□□□ -2.29
CALCOCO2-226ENST00000575461 LPAP08519 4548 aa0.73□□□□□ -2.29
CALCOCO2-226ENST00000575461 DNAH2Q9P225 4427 aa0.73□□□□□ -2.29
CALCOCO2-226ENST00000575461 KIF1AQ12756 1690 aa0.72□□□□□ -2.29
CALCOCO2-226ENST00000575461 DEFB105AQ8NG35 78 aa0.72□□□□□ -2.29
CALCOCO2-226ENST00000575461 FXYD6Q9H0Q3 95 aa0.72□□□□□ -2.29
CALCOCO2-226ENST00000575461 ABCC6O95255 1503 aa0.72□□□□□ -2.29
CALCOCO2-226ENST00000575461 C4AP0C0L4 1744 aa0.72□□□□□ -2.29
CALCOCO2-226ENST00000575461 MUC17Q685J3 4493 aa0.72□□□□□ -2.29
CALCOCO2-226ENST00000575461 EIF2AK4Q9P2K8 1649 aaKnown RBP0.71□□□□□ -2.3
CALCOCO2-226ENST00000575461 TNXBP22105 4242 aa0.71□□□□□ -2.3
CALCOCO2-226ENST00000575461 RRBP1Q9P2E9 1410 aaKnown RBP0.71□□□□□ -2.3
CALCOCO2-226ENST00000575461 KANTRA0A1W2PQU2 76 aa0.69□□□□□ -2.3
CALCOCO2-226ENST00000575461 DNAH17Q9UFH2 4485 aa0.69□□□□□ -2.3
CALCOCO2-226ENST00000575461 CDC42BPAQ5VT25 1732 aa0.69□□□□□ -2.3
CALCOCO2-226ENST00000575461 ABCA10Q8WWZ4 1543 aa0.69□□□□□ -2.3
CALCOCO2-226ENST00000575461 TRPM2O94759 1503 aa0.68□□□□□ -2.3
CALCOCO2-226ENST00000575461 IQGAP2Q13576 1575 aa0.66□□□□□ -2.3
CALCOCO2-226ENST00000575461 CFAP74Q9C0B2 1584 aa0.66□□□□□ -2.3
CALCOCO2-226ENST00000575461 CEBPZOSA8MTT3 80 aa0.66□□□□□ -2.3
CALCOCO2-226ENST00000575461 FAM208AQ9UK61 1670 aaKnown RBP0.65□□□□□ -2.3
CALCOCO2-226ENST00000575461 MT4P47944 62 aa0.65□□□□□ -2.31
CALCOCO2-226ENST00000575461 APLNQ9ULZ1 77 aa0.65□□□□□ -2.31
CALCOCO2-226ENST00000575461 SYCP2Q9BX26 1530 aa0.64□□□□□ -2.31
CALCOCO2-226ENST00000575461 MRPL34Q9BQ48 92 aaKnown RBP0.64□□□□□ -2.31
CALCOCO2-226ENST00000575461 BCORQ6W2J9 1755 aa0.63□□□□□ -2.31
CALCOCO2-226ENST00000575461 LOC730098B7Z3J9 87 aa0.63□□□□□ -2.31
CALCOCO2-226ENST00000575461 COX7BP24311 80 aa0.63□□□□□ -2.31
CALCOCO2-226ENST00000575461 S100A13Q99584 98 aa0.63□□□□□ -2.31
CALCOCO2-226ENST00000575461 VPS13BQ7Z7G8 4022 aa0.63□□□□□ -2.31
CALCOCO2-226ENST00000575461 CCL22O00626 93 aa0.62□□□□□ -2.31
CALCOCO2-226ENST00000575461 SPRR2EP22531 72 aa0.62□□□□□ -2.31
CALCOCO2-226ENST00000575461 SPRR2BP35325 72 aa0.62□□□□□ -2.31
CALCOCO2-226ENST00000575461 SPRR2AP35326 72 aa0.62□□□□□ -2.31
CALCOCO2-226ENST00000575461 DEFB124Q8NES8 71 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms