RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 J3KT08 172 aa4.2□□□□□ -1.74
SMG6-218ENST00000575454 CCKP06307 115 aa4.2□□□□□ -1.74
SMG6-218ENST00000575454 LYRM7Q5U5X0 104 aa4.2□□□□□ -1.74
SMG6-218ENST00000575454 DNAL4O96015 105 aa4.19□□□□□ -1.74
SMG6-218ENST00000575454 H1FX-AS1Q4G0G2 97 aa4.19□□□□□ -1.74
SMG6-218ENST00000575454 DSCR8Q96T75 97 aa4.19□□□□□ -1.74
SMG6-218ENST00000575454 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
SMG6-218ENST00000575454 C21orf62-AS1Q17RA5 79 aa4.18□□□□□ -1.74
SMG6-218ENST00000575454 ORMDL1Q9P0S3 153 aa4.18□□□□□ -1.74
SMG6-218ENST00000575454 DLEU1O43261 78 aa4.17□□□□□ -1.74
SMG6-218ENST00000575454 NDUFB1O75438 58 aa4.17□□□□□ -1.74
SMG6-218ENST00000575454 A0A1B0GV72 72 aa4.16□□□□□ -1.74
SMG6-218ENST00000575454 COX8AP10176 69 aa4.16□□□□□ -1.74
SMG6-218ENST00000575454 S100A2P29034 98 aa4.16□□□□□ -1.74
SMG6-218ENST00000575454 PRO1854Q9UHT4 67 aa4.15□□□□□ -1.75
SMG6-218ENST00000575454 VPS25Q9BRG1 176 aa4.14□□□□□ -1.75
SMG6-218ENST00000575454 IGKV3D-7A0A0C4DH55 119 aa4.13□□□□□ -1.75
SMG6-218ENST00000575454 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
SMG6-218ENST00000575454 UBE2V1Q13404 147 aa4.13□□□□□ -1.75
SMG6-218ENST00000575454 HIST1H2BLQ99880 126 aa4.13□□□□□ -1.75
SMG6-218ENST00000575454 HIGD1BQ9P298 99 aa4.13□□□□□ -1.75
SMG6-218ENST00000575454 TRIAP1O43715 76 aa4.12□□□□□ -1.75
SMG6-218ENST00000575454 Q5VV11 94 aa4.12□□□□□ -1.75
SMG6-218ENST00000575454 HIST3H2BBQ8N257 126 aa4.12□□□□□ -1.75
SMG6-218ENST00000575454 RBM3P98179 157 aaKnown RBP4.11□□□□□ -1.75
SMG6-218ENST00000575454 COX6CP09669 75 aa4.1□□□□□ -1.75
SMG6-218ENST00000575454 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
SMG6-218ENST00000575454 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
SMG6-218ENST00000575454 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
SMG6-218ENST00000575454 Q6ZVQ6 151 aa4.09□□□□□ -1.75
SMG6-218ENST00000575454 CEND1Q8N111 149 aa4.09□□□□□ -1.75
SMG6-218ENST00000575454 FAM236AA0A1B0GUQ0 79 aa4.08□□□□□ -1.76
SMG6-218ENST00000575454 FAM236BA0A1B0GV22 79 aa4.08□□□□□ -1.76
SMG6-218ENST00000575454 PSMB2P49721 201 aa4.08□□□□□ -1.76
SMG6-218ENST00000575454 Q6ZQT0 140 aa4.08□□□□□ -1.76
SMG6-218ENST00000575454 C14orf144Q96I85 54 aa4.08□□□□□ -1.76
SMG6-218ENST00000575454 C9JAW5 83 aa4.07□□□□□ -1.76
SMG6-218ENST00000575454 MT1BP07438 61 aa4.07□□□□□ -1.76
SMG6-218ENST00000575454 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
SMG6-218ENST00000575454 C2orf91Q6ZV80 131 aa4.07□□□□□ -1.76
SMG6-218ENST00000575454 A0A1B0GW54 56 aa4.05□□□□□ -1.76
SMG6-218ENST00000575454 S100A6P06703 90 aa4.05□□□□□ -1.76
SMG6-218ENST00000575454 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
SMG6-218ENST00000575454 SPRR2GQ9BYE4 73 aa4.05□□□□□ -1.76
SMG6-218ENST00000575454 FXYD2P54710 66 aa4.04□□□□□ -1.76
SMG6-218ENST00000575454 PRR15Q8IV56 129 aa4.03□□□□□ -1.76
SMG6-218ENST00000575454 TMEM254Q8TBM7 123 aa4.03□□□□□ -1.76
SMG6-218ENST00000575454 MRPL34Q9BQ48 92 aaKnown RBP4.03□□□□□ -1.76
SMG6-218ENST00000575454 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
SMG6-218ENST00000575454 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
SMG6-218ENST00000575454 SPATA45Q537H7 98 aa4.02□□□□□ -1.77
SMG6-218ENST00000575454 C7orf65Q6ZTY9 151 aa4.02□□□□□ -1.77
SMG6-218ENST00000575454 PAM16Q9Y3D7 125 aa4.02□□□□□ -1.77
SMG6-218ENST00000575454 NDUFS5O43920 106 aa4.01□□□□□ -1.77
SMG6-218ENST00000575454 C5orf47Q569G3 176 aa4.01□□□□□ -1.77
SMG6-218ENST00000575454 SCGB1C2P0DMR2 95 aa4□□□□□ -1.77
SMG6-218ENST00000575454 PDE6GP18545 87 aa4□□□□□ -1.77
SMG6-218ENST00000575454 S100A1P23297 94 aa4□□□□□ -1.77
SMG6-218ENST00000575454 CSAG1Q6PB30 78 aa4□□□□□ -1.77
SMG6-218ENST00000575454 VAMP8Q9BV40 100 aa4□□□□□ -1.77
SMG6-218ENST00000575454 hDV103S1A0JD37 113 aa3.99□□□□□ -1.77
SMG6-218ENST00000575454 BAALC-AS2P0C853 105 aa3.99□□□□□ -1.77
SMG6-218ENST00000575454 IMUPQ9GZP8 106 aa3.99□□□□□ -1.77
SMG6-218ENST00000575454 MMP24-AS1A0A0U1RRL7 71 aa3.98□□□□□ -1.77
SMG6-218ENST00000575454 JMJD7-PLA2G4BH0Y9G9 81 aa3.98□□□□□ -1.77
SMG6-218ENST00000575454 K7ERJ3 54 aa3.98□□□□□ -1.77
SMG6-218ENST00000575454 LOC110117498A0A087WWA1 95 aa3.97□□□□□ -1.77
SMG6-218ENST00000575454 HSD52Q0P140 79 aa3.97□□□□□ -1.77
SMG6-218ENST00000575454 NREPQ16612 68 aa3.97□□□□□ -1.77
SMG6-218ENST00000575454 C4orf26Q17RF5 130 aa3.97□□□□□ -1.77
SMG6-218ENST00000575454 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
SMG6-218ENST00000575454 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
SMG6-218ENST00000575454 SPRR2EP22531 72 aa3.95□□□□□ -1.78
SMG6-218ENST00000575454 SPRR2BP35325 72 aa3.95□□□□□ -1.78
SMG6-218ENST00000575454 SPRR2AP35326 72 aa3.95□□□□□ -1.78
SMG6-218ENST00000575454 KLKP1Q107X0 134 aa3.95□□□□□ -1.78
SMG6-218ENST00000575454 S4R3F8 94 aa3.95□□□□□ -1.78
SMG6-218ENST00000575454 Q5W150 140 aa3.94□□□□□ -1.78
SMG6-218ENST00000575454 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
SMG6-218ENST00000575454 CRIPTQ9P021 101 aa3.93□□□□□ -1.78
SMG6-218ENST00000575454 K7EQZ3 153 aa3.91□□□□□ -1.78
SMG6-218ENST00000575454 SMCPP49901 116 aaPredicted RBP3.9□□□□□ -1.79
SMG6-218ENST00000575454 ATXN8Q156A1 80 aa3.9□□□□□ -1.79
SMG6-218ENST00000575454 CXCL6P80162 114 aa3.89□□□□□ -1.79
SMG6-218ENST00000575454 LCA10Q71F78 164 aa3.89□□□□□ -1.79
SMG6-218ENST00000575454 C1orf64Q8NEQ6 169 aa3.88□□□□□ -1.79
SMG6-218ENST00000575454 KRTAP3-1Q9BYR8 98 aa3.88□□□□□ -1.79
SMG6-218ENST00000575454 C14orf132Q9NPU4 83 aa3.88□□□□□ -1.79
SMG6-218ENST00000575454 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
SMG6-218ENST00000575454 HCG22E2RYF7 251 aa3.87□□□□□ -1.79
SMG6-218ENST00000575454 BPY2O14599 106 aa3.87□□□□□ -1.79
SMG6-218ENST00000575454 CASC2Q6XLA1 102 aa3.87□□□□□ -1.79
SMG6-218ENST00000575454 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
SMG6-218ENST00000575454 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
SMG6-218ENST00000575454 UQCR10Q9UDW1 63 aa3.84□□□□□ -1.79
SMG6-218ENST00000575454 SPRR2DP22532 72 aa3.83□□□□□ -1.8
SMG6-218ENST00000575454 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
SMG6-218ENST00000575454 Q8N9L7 120 aa3.79□□□□□ -1.8
SMG6-218ENST00000575454 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
SMG6-218ENST00000575454 PYY3Q5JQD4 70 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms