RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 CDK2AP2O75956 126 aa4.81□□□□□ -1.64
TOM1L1-220ENST00000575333 C20orf166-AS1Q96NR2 134 aa4.81□□□□□ -1.64
TOM1L1-220ENST00000575333 ATRQ13535 2644 aa4.81□□□□□ -1.64
TOM1L1-220ENST00000575333 NUPR2A6NF83 97 aa4.81□□□□□ -1.64
TOM1L1-220ENST00000575333 ALMS1Q8TCU4 4167 aa4.8□□□□□ -1.64
TOM1L1-220ENST00000575333 A0A096LPF7 62 aa4.8□□□□□ -1.64
TOM1L1-220ENST00000575333 MRPL34Q9BQ48 92 aaKnown RBP4.79□□□□□ -1.64
TOM1L1-220ENST00000575333 SPRR1BP22528 89 aa4.79□□□□□ -1.64
TOM1L1-220ENST00000575333 KRTAP26-1Q6PEX3 210 aa4.79□□□□□ -1.64
TOM1L1-220ENST00000575333 C15orf56Q8N910 161 aa4.79□□□□□ -1.64
TOM1L1-220ENST00000575333 K7ERS5 55 aa4.78□□□□□ -1.64
TOM1L1-220ENST00000575333 DNAH10OSP0CZ25 163 aa4.77□□□□□ -1.65
TOM1L1-220ENST00000575333 KRTAP24-1Q3LI83 254 aa4.77□□□□□ -1.65
TOM1L1-220ENST00000575333 CASC10Q5T4H9 136 aa4.77□□□□□ -1.65
TOM1L1-220ENST00000575333 COL6A5A8TX70 2615 aa4.77□□□□□ -1.65
TOM1L1-220ENST00000575333 SEC61BP60468 96 aaKnown RBP4.76□□□□□ -1.65
TOM1L1-220ENST00000575333 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
TOM1L1-220ENST00000575333 TENM1Q9UKZ4 2725 aa4.76□□□□□ -1.65
TOM1L1-220ENST00000575333 A0A1B0GVX0 72 aa4.76□□□□□ -1.65
TOM1L1-220ENST00000575333 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
TOM1L1-220ENST00000575333 Q5W150 140 aa4.74□□□□□ -1.65
TOM1L1-220ENST00000575333 LINC00304Q8N9R0 145 aa4.74□□□□□ -1.65
TOM1L1-220ENST00000575333 LY6G6CO95867 125 aa4.74□□□□□ -1.65
TOM1L1-220ENST00000575333 STAB1Q9NY15 2570 aa4.74□□□□□ -1.65
TOM1L1-220ENST00000575333 ANK2Q01484 3957 aa4.73□□□□□ -1.65
TOM1L1-220ENST00000575333 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
TOM1L1-220ENST00000575333 KRTAP13-3Q3SY46 172 aa4.73□□□□□ -1.65
TOM1L1-220ENST00000575333 A0A0G2JQZ4 141 aa4.72□□□□□ -1.65
TOM1L1-220ENST00000575333 A0A1W2PNN7 141 aa4.72□□□□□ -1.65
TOM1L1-220ENST00000575333 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
TOM1L1-220ENST00000575333 CHTF8P0CG12 524 aa4.72□□□□□ -1.65
TOM1L1-220ENST00000575333 KRTAP21-3Q3LHN1 58 aa4.72□□□□□ -1.65
TOM1L1-220ENST00000575333 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
TOM1L1-220ENST00000575333 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
TOM1L1-220ENST00000575333 DNHD1Q96M86 4753 aa4.7□□□□□ -1.66
TOM1L1-220ENST00000575333 Q96NJ1 140 aa4.7□□□□□ -1.66
TOM1L1-220ENST00000575333 NOTCH3Q9UM47 2321 aa4.7□□□□□ -1.66
TOM1L1-220ENST00000575333 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
TOM1L1-220ENST00000575333 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
TOM1L1-220ENST00000575333 ANAPC11Q9NYG5 84 aa4.69□□□□□ -1.66
TOM1L1-220ENST00000575333 A0A087WTM6 91 aa4.69□□□□□ -1.66
TOM1L1-220ENST00000575333 TRRAPQ9Y4A5 3859 aa4.68□□□□□ -1.66
TOM1L1-220ENST00000575333 VWFP04275 2813 aa4.67□□□□□ -1.66
TOM1L1-220ENST00000575333 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
TOM1L1-220ENST00000575333 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
TOM1L1-220ENST00000575333 PKD1L1Q8TDX9 2849 aa4.66□□□□□ -1.66
TOM1L1-220ENST00000575333 IGLV9-49A0A0B4J1Y8 123 aa4.66□□□□□ -1.66
TOM1L1-220ENST00000575333 H3BNG1 76 aa4.66□□□□□ -1.66
TOM1L1-220ENST00000575333 CMYA5Q8N3K9 4069 aa4.66□□□□□ -1.66
TOM1L1-220ENST00000575333 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.66
TOM1L1-220ENST00000575333 PANO1I0J062 215 aa4.64□□□□□ -1.67
TOM1L1-220ENST00000575333 SSBP3-AS1Q7Z2R9 100 aa4.64□□□□□ -1.67
TOM1L1-220ENST00000575333 SPART-AS1P0CW21 52 aa4.63□□□□□ -1.67
TOM1L1-220ENST00000575333 KRTAP7-1Q8IUC3 87 aa4.63□□□□□ -1.67
TOM1L1-220ENST00000575333 PRLHP81277 87 aa4.62□□□□□ -1.67
TOM1L1-220ENST00000575333 H0YAA0 97 aa4.62□□□□□ -1.67
TOM1L1-220ENST00000575333 IGKV2-30P06310 120 aa4.62□□□□□ -1.67
TOM1L1-220ENST00000575333 LINC01556Q5JQF7 62 aa4.62□□□□□ -1.67
TOM1L1-220ENST00000575333 PSORS1C2Q9UIG4 136 aa4.6□□□□□ -1.67
TOM1L1-220ENST00000575333 NBEAL1Q6ZS30 2694 aa4.6□□□□□ -1.67
TOM1L1-220ENST00000575333 MGAM2Q2M2H8 2515 aa4.59□□□□□ -1.68
TOM1L1-220ENST00000575333 K7EIL1 84 aa4.58□□□□□ -1.68
TOM1L1-220ENST00000575333 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
TOM1L1-220ENST00000575333 Q6ZSA8 131 aa4.58□□□□□ -1.68
TOM1L1-220ENST00000575333 IGKV2D-30A0A075B6S6 120 aa4.57□□□□□ -1.68
TOM1L1-220ENST00000575333 NOTCH1P46531 2555 aa4.56□□□□□ -1.68
TOM1L1-220ENST00000575333 HTN3P15516 51 aa4.56□□□□□ -1.68
TOM1L1-220ENST00000575333 A0A1B0GU33 70 aa4.56□□□□□ -1.68
TOM1L1-220ENST00000575333 DNAH3Q8TD57 4116 aa4.54□□□□□ -1.68
TOM1L1-220ENST00000575333 MEGF8Q7Z7M0 2845 aa4.53□□□□□ -1.68
TOM1L1-220ENST00000575333 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
TOM1L1-220ENST00000575333 H1FX-AS1Q4G0G2 97 aa4.53□□□□□ -1.68
TOM1L1-220ENST00000575333 TENM2Q9NT68 2774 aa4.52□□□□□ -1.69
TOM1L1-220ENST00000575333 NBDYA0A0U1RRE5 68 aa4.52□□□□□ -1.69
TOM1L1-220ENST00000575333 DEFB135Q30KP9 77 aa4.52□□□□□ -1.69
TOM1L1-220ENST00000575333 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
TOM1L1-220ENST00000575333 KRTAP10-11P60412 298 aa4.51□□□□□ -1.69
TOM1L1-220ENST00000575333 DEFB4AO15263 64 aa4.5□□□□□ -1.69
TOM1L1-220ENST00000575333 A0A096LNI7 61 aa4.49□□□□□ -1.69
TOM1L1-220ENST00000575333 COX6B2Q6YFQ2 88 aa4.49□□□□□ -1.69
TOM1L1-220ENST00000575333 PRKDCP78527 4128 aaKnown RBP4.48□□□□□ -1.69
TOM1L1-220ENST00000575333 CRIPTQ9P021 101 aa4.48□□□□□ -1.69
TOM1L1-220ENST00000575333 KRTAP13-1Q8IUC0 172 aa4.46□□□□□ -1.69
TOM1L1-220ENST00000575333 TPRXLQ17RH7 258 aa4.46□□□□□ -1.7
TOM1L1-220ENST00000575333 CIRBP-AS1Q8TBR5 109 aa4.44□□□□□ -1.7
TOM1L1-220ENST00000575333 KRTAP4-5Q9BYR2 181 aa4.44□□□□□ -1.7
TOM1L1-220ENST00000575333 COL7A1Q02388 2944 aa4.43□□□□□ -1.7
TOM1L1-220ENST00000575333 TGP01266 2768 aa4.43□□□□□ -1.7
TOM1L1-220ENST00000575333 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
TOM1L1-220ENST00000575333 NBEAL2Q6ZNJ1 2754 aa4.43□□□□□ -1.7
TOM1L1-220ENST00000575333 DNAH9Q9NYC9 4486 aa4.42□□□□□ -1.7
TOM1L1-220ENST00000575333 C14orf177Q52M58 125 aa4.42□□□□□ -1.7
TOM1L1-220ENST00000575333 SPINK1P00995 79 aa4.41□□□□□ -1.7
TOM1L1-220ENST00000575333 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
TOM1L1-220ENST00000575333 HUWE1Q7Z6Z7 4374 aaKnown RBP4.4□□□□□ -1.71
TOM1L1-220ENST00000575333 SPINK6Q6UWN8 80 aa4.38□□□□□ -1.71
TOM1L1-220ENST00000575333 TENM3Q9P273 2699 aa4.38□□□□□ -1.71
TOM1L1-220ENST00000575333 TYMSOSQ8TAI1 123 aa4.37□□□□□ -1.71
TOM1L1-220ENST00000575333 STAB2Q8WWQ8 2551 aa4.34□□□□□ -1.71
TOM1L1-220ENST00000575333 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms