RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 DEFB116Q30KQ4 102 aa9.56□□□□□ -0.88
SMPD3-212ENST00000574662 FAM229BQ4G0N7 80 aa9.56□□□□□ -0.88
SMPD3-212ENST00000574662 A8MWP4 228 aa9.55□□□□□ -0.88
SMPD3-212ENST00000574662 H3BPC8 53 aa9.55□□□□□ -0.88
SMPD3-212ENST00000574662 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
SMPD3-212ENST00000574662 PRR15Q8IV56 129 aa9.55□□□□□ -0.88
SMPD3-212ENST00000574662 CYP4F30PQ9H0H9 118 aa9.55□□□□□ -0.88
SMPD3-212ENST00000574662 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
SMPD3-212ENST00000574662 LINC00472Q9H8W2 130 aa9.54□□□□□ -0.88
SMPD3-212ENST00000574662 KRTAP4-5Q9BYR2 181 aa9.53□□□□□ -0.88
SMPD3-212ENST00000574662 PRO0628Q9UI54 55 aa9.53□□□□□ -0.88
SMPD3-212ENST00000574662 PCLOQ9Y6V0 5065 aa9.52□□□□□ -0.88
SMPD3-212ENST00000574662 TRAV22A0A0B4J277 110 aa9.5□□□□□ -0.89
SMPD3-212ENST00000574662 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
SMPD3-212ENST00000574662 ABCA13Q86UQ4 5058 aa9.49□□□□□ -0.89
SMPD3-212ENST00000574662 C1orf64Q8NEQ6 169 aa9.49□□□□□ -0.89
SMPD3-212ENST00000574662 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
SMPD3-212ENST00000574662 ANAPC11Q9NYG5 84 aa9.48□□□□□ -0.89
SMPD3-212ENST00000574662 H0Y9P7 68 aa9.47□□□□□ -0.89
SMPD3-212ENST00000574662 PKHD1L1Q86WI1 4243 aa9.47□□□□□ -0.89
SMPD3-212ENST00000574662 LINC00208Q96KT6 92 aa9.46□□□□□ -0.9
SMPD3-212ENST00000574662 ZNF706Q9Y5V0 76 aaPredicted RBP9.46□□□□□ -0.9
SMPD3-212ENST00000574662 SPANXA2-OT1Q8N9U9 137 aa9.45□□□□□ -0.9
SMPD3-212ENST00000574662 KRTAP1-4P0C5Y4 121 aa9.44□□□□□ -0.9
SMPD3-212ENST00000574662 Q1T7F1 81 aa9.44□□□□□ -0.9
SMPD3-212ENST00000574662 LINC00483Q53H64 154 aa9.44□□□□□ -0.9
SMPD3-212ENST00000574662 MMP24-AS1A0A0U1RRL7 71 aa9.43□□□□□ -0.9
SMPD3-212ENST00000574662 MOBPQ13875 183 aa9.41□□□□□ -0.9
SMPD3-212ENST00000574662 IGLV9-49A0A0B4J1Y8 123 aa9.39□□□□□ -0.91
SMPD3-212ENST00000574662 BRK1Q8WUW1 75 aa9.39□□□□□ -0.91
SMPD3-212ENST00000574662 A0A087X002 238 aa9.37□□□□□ -0.91
SMPD3-212ENST00000574662 PRR4Q16378 134 aa9.37□□□□□ -0.91
SMPD3-212ENST00000574662 Q96NJ1 140 aa9.37□□□□□ -0.91
SMPD3-212ENST00000574662 TP53AIP1Q9HCN2 124 aa9.37□□□□□ -0.91
SMPD3-212ENST00000574662 V9GYY9 64 aa9.37□□□□□ -0.91
SMPD3-212ENST00000574662 ASB16-AS1Q495Z4 193 aa9.35□□□□□ -0.91
SMPD3-212ENST00000574662 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
SMPD3-212ENST00000574662 KRTAP13-2Q52LG2 175 aa9.35□□□□□ -0.91
SMPD3-212ENST00000574662 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
SMPD3-212ENST00000574662 PRR26Q8N8Z3 221 aa9.33□□□□□ -0.92
SMPD3-212ENST00000574662 C8orf17Q9NRJ1 99 aa9.32□□□□□ -0.92
SMPD3-212ENST00000574662 FAT3Q8TDW7 4589 aa9.31□□□□□ -0.92
SMPD3-212ENST00000574662 MYCBP2O75592 4640 aa9.3□□□□□ -0.92
SMPD3-212ENST00000574662 A0A1B0GVX0 72 aa9.29□□□□□ -0.92
SMPD3-212ENST00000574662 IGLV7-46A0A075B6I9 117 aa9.27□□□□□ -0.93
SMPD3-212ENST00000574662 C1orf195Q5TG92 126 aa9.27□□□□□ -0.93
SMPD3-212ENST00000574662 KRTAP10-8P60410 259 aa9.24□□□□□ -0.93
SMPD3-212ENST00000574662 TYMSOSQ8TAI1 123 aa9.24□□□□□ -0.93
SMPD3-212ENST00000574662 IGHV6-1A0A0B4J1U7 121 aa9.24□□□□□ -0.93
SMPD3-212ENST00000574662 MRPL34Q9BQ48 92 aaKnown RBP9.24□□□□□ -0.93
SMPD3-212ENST00000574662 SSBP3-AS1Q7Z2R9 100 aa9.23□□□□□ -0.93
SMPD3-212ENST00000574662 LIMD2Q9BT23 127 aa9.22□□□□□ -0.93
SMPD3-212ENST00000574662 TNXBP22105 4242 aa9.22□□□□□ -0.93
SMPD3-212ENST00000574662 PSPHP1O15172 72 aa9.22□□□□□ -0.93
SMPD3-212ENST00000574662 MT1HL1P0DM35 61 aa9.21□□□□□ -0.94
SMPD3-212ENST00000574662 NDUFS5O43920 106 aa9.2□□□□□ -0.94
SMPD3-212ENST00000574662 COA5Q86WW8 74 aa9.19□□□□□ -0.94
SMPD3-212ENST00000574662 CD164Q04900 197 aa9.19□□□□□ -0.94
SMPD3-212ENST00000574662 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
SMPD3-212ENST00000574662 J3QL48 77 aa9.17□□□□□ -0.94
SMPD3-212ENST00000574662 A8MUN3 132 aa9.17□□□□□ -0.94
SMPD3-212ENST00000574662 PCOTHQ58A44 107 aa9.17□□□□□ -0.94
SMPD3-212ENST00000574662 Q5VV11 94 aa9.14□□□□□ -0.95
SMPD3-212ENST00000574662 DMBT1Q9UGM3 2413 aaPredicted RBP9.13□□□□□ -0.95
SMPD3-212ENST00000574662 LOC101927531A0A1B0GV80 90 aa9.13□□□□□ -0.95
SMPD3-212ENST00000574662 LINC00304Q8N9R0 145 aa9.13□□□□□ -0.95
SMPD3-212ENST00000574662 C8orf87E5RJ46 101 aa9.12□□□□□ -0.95
SMPD3-212ENST00000574662 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
SMPD3-212ENST00000574662 HERC1Q15751 4861 aa9.1□□□□□ -0.95
SMPD3-212ENST00000574662 C4orf48Q5BLP8 95 aa9.09□□□□□ -0.95
SMPD3-212ENST00000574662 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
SMPD3-212ENST00000574662 Q75L30 129 aa9.07□□□□□ -0.96
SMPD3-212ENST00000574662 SPAG11AQ6PDA7 123 aa9.07□□□□□ -0.96
SMPD3-212ENST00000574662 CHKB-CPT1BH3BT56 60 aa9.06□□□□□ -0.96
SMPD3-212ENST00000574662 SPINK1P00995 79 aa9.06□□□□□ -0.96
SMPD3-212ENST00000574662 KRTAP13-3Q3SY46 172 aa9.04□□□□□ -0.96
SMPD3-212ENST00000574662 LINC01558Q9Y6Z2 57 aa9.03□□□□□ -0.96
SMPD3-212ENST00000574662 HRES1P13985 223 aa9.01□□□□□ -0.97
SMPD3-212ENST00000574662 RPS29P62273 56 aaKnown RBP8.99□□□□□ -0.97
SMPD3-212ENST00000574662 Q5W150 140 aa8.98□□□□□ -0.97
SMPD3-212ENST00000574662 A6NED7 52 aa8.96□□□□□ -0.98
SMPD3-212ENST00000574662 LINC00313P59037 77 aa8.96□□□□□ -0.98
SMPD3-212ENST00000574662 RETNLBQ9BQ08 111 aa8.94□□□□□ -0.98
SMPD3-212ENST00000574662 ACYP2P14621 99 aa8.93□□□□□ -0.98
SMPD3-212ENST00000574662 PMAIP1Q13794 54 aa8.92□□□□□ -0.98
SMPD3-212ENST00000574662 CDC42SE1Q9NRR8 79 aa8.91□□□□□ -0.98
SMPD3-212ENST00000574662 ATP11AUNQ6ZP68 121 aa8.89□□□□□ -0.99
SMPD3-212ENST00000574662 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
SMPD3-212ENST00000574662 A8MU10 97 aa8.86□□□□□ -0.99
SMPD3-212ENST00000574662 IGKV2-30P06310 120 aa8.86□□□□□ -0.99
SMPD3-212ENST00000574662 LCA10Q71F78 164 aa8.86□□□□□ -0.99
SMPD3-212ENST00000574662 KRTAP16-1A8MUX0 517 aa8.84□□□□□ -1
SMPD3-212ENST00000574662 SPTSSBQ8NFR3 76 aa8.81□□□□□ -1
SMPD3-212ENST00000574662 HMCN2Q8NDA2 5059 aa8.77□□□□□ -1.01
SMPD3-212ENST00000574662 SPINK7P58062 85 aa8.76□□□□□ -1.01
SMPD3-212ENST00000574662 KTN1-AS1Q86SY8 53 aa8.75□□□□□ -1.01
SMPD3-212ENST00000574662 A6NN06 94 aa8.73□□□□□ -1.01
SMPD3-212ENST00000574662 C9orf92A6NGG3 77 aa8.7□□□□□ -1.02
SMPD3-212ENST00000574662 LPAP08519 4548 aa8.69□□□□□ -1.02
SMPD3-212ENST00000574662 IGKV2D-30A0A075B6S6 120 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms