RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
NDE1-210ENST00000574163 LOC110117498A0A087WWA1 95 aa5.24□□□□□ -1.57
NDE1-210ENST00000574163 C9JAW5 83 aa5.24□□□□□ -1.57
NDE1-210ENST00000574163 TAX1BP3O14907 124 aa5.24□□□□□ -1.57
NDE1-210ENST00000574163 Q75L30 129 aa5.24□□□□□ -1.57
NDE1-210ENST00000574163 A0A1B0GW54 56 aa5.23□□□□□ -1.57
NDE1-210ENST00000574163 A0A1W2PPM0 123 aa5.23□□□□□ -1.57
NDE1-210ENST00000574163 PDE6GP18545 87 aa5.23□□□□□ -1.57
NDE1-210ENST00000574163 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
NDE1-210ENST00000574163 VPS25Q9BRG1 176 aa5.22□□□□□ -1.57
NDE1-210ENST00000574163 LINC00472Q9H8W2 130 aa5.22□□□□□ -1.57
NDE1-210ENST00000574163 H3BT86 120 aa5.21□□□□□ -1.58
NDE1-210ENST00000574163 IGKV4-1P06312 121 aa5.21□□□□□ -1.58
NDE1-210ENST00000574163 Q6ZQT0 140 aa5.21□□□□□ -1.58
NDE1-210ENST00000574163 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.58
NDE1-210ENST00000574163 A8MUU9 505 aa5.19□□□□□ -1.58
NDE1-210ENST00000574163 J3KT08 172 aa5.19□□□□□ -1.58
NDE1-210ENST00000574163 COL5A1-AS1Q5SY13 56 aa5.19□□□□□ -1.58
NDE1-210ENST00000574163 ATP11AUNQ6ZP68 121 aa5.17□□□□□ -1.58
NDE1-210ENST00000574163 C14orf132Q9NPU4 83 aa5.17□□□□□ -1.58
NDE1-210ENST00000574163 A0A1B0GVX0 72 aa5.16□□□□□ -1.58
NDE1-210ENST00000574163 C8orf87E5RJ46 101 aa5.16□□□□□ -1.58
NDE1-210ENST00000574163 DSCR10P59022 87 aa5.16□□□□□ -1.58
NDE1-210ENST00000574163 LINC00313P59037 77 aa5.16□□□□□ -1.58
NDE1-210ENST00000574163 SPCS1Q9Y6A9 102 aa5.16□□□□□ -1.58
NDE1-210ENST00000574163 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.59
NDE1-210ENST00000574163 DEFB116Q30KQ4 102 aa5.14□□□□□ -1.59
NDE1-210ENST00000574163 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
NDE1-210ENST00000574163 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
NDE1-210ENST00000574163 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
NDE1-210ENST00000574163 IGHV6-1A0A0B4J1U7 121 aa5.13□□□□□ -1.59
NDE1-210ENST00000574163 MTURNQ8N3F0 131 aa5.13□□□□□ -1.59
NDE1-210ENST00000574163 NDUFB1O75438 58 aa5.12□□□□□ -1.59
NDE1-210ENST00000574163 A8MWP4 228 aa5.11□□□□□ -1.59
NDE1-210ENST00000574163 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
NDE1-210ENST00000574163 K7EP34 96 aa5.1□□□□□ -1.59
NDE1-210ENST00000574163 NREPQ16612 68 aa5.09□□□□□ -1.59
NDE1-210ENST00000574163 PRO0461Q9UI25 63 aa5.08□□□□□ -1.6
NDE1-210ENST00000574163 IGKV3D-7A0A0C4DH55 119 aa5.07□□□□□ -1.6
NDE1-210ENST00000574163 PCP4L1A6NKN8 68 aa5.06□□□□□ -1.6
NDE1-210ENST00000574163 MT1HP80294 61 aa5.06□□□□□ -1.6
NDE1-210ENST00000574163 COX6B2Q6YFQ2 88 aa5.06□□□□□ -1.6
NDE1-210ENST00000574163 GTF2H5Q6ZYL4 71 aa5.06□□□□□ -1.6
NDE1-210ENST00000574163 PRR15Q8IV56 129 aa5.06□□□□□ -1.6
NDE1-210ENST00000574163 C8orf17Q9NRJ1 99 aa5.06□□□□□ -1.6
NDE1-210ENST00000574163 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
NDE1-210ENST00000574163 Q8N9P0 234 aaPredicted RBP5.05□□□□□ -1.6
NDE1-210ENST00000574163 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
NDE1-210ENST00000574163 ZCCHC13Q8WW36 166 aaKnown RBP5.03□□□□□ -1.6
NDE1-210ENST00000574163 BPY2O14599 106 aa5.02□□□□□ -1.61
NDE1-210ENST00000574163 Q6ZVQ6 151 aa5.02□□□□□ -1.61
NDE1-210ENST00000574163 MMP24-AS1A0A0U1RRL7 71 aa5.01□□□□□ -1.61
NDE1-210ENST00000574163 F8W1H4 67 aa5.01□□□□□ -1.61
NDE1-210ENST00000574163 TMEM254Q8TBM7 123 aa5.01□□□□□ -1.61
NDE1-210ENST00000574163 K7EQZ3 153 aa5□□□□□ -1.61
NDE1-210ENST00000574163 PCP4P48539 62 aa4.99□□□□□ -1.61
NDE1-210ENST00000574163 UBL5Q9BZL1 73 aa4.99□□□□□ -1.61
NDE1-210ENST00000574163 hDV103S1A0JD37 113 aa4.98□□□□□ -1.61
NDE1-210ENST00000574163 MPLKIPQ8TAP9 179 aa4.98□□□□□ -1.61
NDE1-210ENST00000574163 MRPL34Q9BQ48 92 aaKnown RBP4.98□□□□□ -1.61
NDE1-210ENST00000574163 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
NDE1-210ENST00000574163 HRES1P13985 223 aa4.97□□□□□ -1.61
NDE1-210ENST00000574163 LINC00846Q9NV44 126 aa4.97□□□□□ -1.61
NDE1-210ENST00000574163 M0R2T5 61 aa4.96□□□□□ -1.62
NDE1-210ENST00000574163 RBM12B-AS1Q9P1G2 102 aa4.96□□□□□ -1.62
NDE1-210ENST00000574163 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
NDE1-210ENST00000574163 ETDBQ3ZM63 59 aa4.95□□□□□ -1.62
NDE1-210ENST00000574163 LCE1DQ5T752 114 aa4.94□□□□□ -1.62
NDE1-210ENST00000574163 FAM236DA0A1B0GTK5 79 aa4.93□□□□□ -1.62
NDE1-210ENST00000574163 FAM236CP0DP71 79 aa4.93□□□□□ -1.62
NDE1-210ENST00000574163 SPINK7P58062 85 aa4.93□□□□□ -1.62
NDE1-210ENST00000574163 Q8N9L7 120 aa4.93□□□□□ -1.62
NDE1-210ENST00000574163 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
NDE1-210ENST00000574163 CASC2Q6XLA1 102 aa4.92□□□□□ -1.62
NDE1-210ENST00000574163 NDUFS5O43920 106 aa4.91□□□□□ -1.62
NDE1-210ENST00000574163 CXCL6P80162 114 aa4.91□□□□□ -1.62
NDE1-210ENST00000574163 WFDC13Q8IUB5 93 aa4.9□□□□□ -1.63
NDE1-210ENST00000574163 FAM240AA0A1B0GVK7 77 aa4.89□□□□□ -1.63
NDE1-210ENST00000574163 HCG22E2RYF7 251 aa4.89□□□□□ -1.63
NDE1-210ENST00000574163 ACYP1P07311 99 aa4.88□□□□□ -1.63
NDE1-210ENST00000574163 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
NDE1-210ENST00000574163 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
NDE1-210ENST00000574163 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
NDE1-210ENST00000574163 ATP5EP2Q5VTU8 51 aa4.85□□□□□ -1.63
NDE1-210ENST00000574163 Q5W150 140 aa4.84□□□□□ -1.63
NDE1-210ENST00000574163 IGKV2D-30A0A075B6S6 120 aa4.82□□□□□ -1.64
NDE1-210ENST00000574163 IGKV2-30P06310 120 aa4.82□□□□□ -1.64
NDE1-210ENST00000574163 TP53AIP1Q9HCN2 124 aa4.82□□□□□ -1.64
NDE1-210ENST00000574163 A0A1B0GV90 55 aa4.81□□□□□ -1.64
NDE1-210ENST00000574163 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
NDE1-210ENST00000574163 H1FX-AS1Q4G0G2 97 aa4.77□□□□□ -1.65
NDE1-210ENST00000574163 LINC00643Q86TS7 51 aa4.76□□□□□ -1.65
NDE1-210ENST00000574163 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
NDE1-210ENST00000574163 KRTAP4-7Q9BYR0 210 aa4.76□□□□□ -1.65
NDE1-210ENST00000574163 MT2AP02795 61 aa4.75□□□□□ -1.65
NDE1-210ENST00000574163 TRAV22A0A0B4J277 110 aa4.73□□□□□ -1.65
NDE1-210ENST00000574163 J3QR89 54 aa4.72□□□□□ -1.65
NDE1-210ENST00000574163 HIST1H4AP62805 103 aaKnown RBP4.72□□□□□ -1.65
NDE1-210ENST00000574163 C4orf26Q17RF5 130 aa4.71□□□□□ -1.66
NDE1-210ENST00000574163 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms