RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
CCDC40-210ENST00000573903 PDE6GP18545 87 aa6.32□□□□□ -1.4
CCDC40-210ENST00000573903 LOC110117498A0A087WWA1 95 aa6.31□□□□□ -1.4
CCDC40-210ENST00000573903 COL5A1-AS1Q5SY13 56 aa6.31□□□□□ -1.4
CCDC40-210ENST00000573903 Q6ZQT0 140 aa6.3□□□□□ -1.4
CCDC40-210ENST00000573903 A0A1B0GW54 56 aa6.29□□□□□ -1.4
CCDC40-210ENST00000573903 LINC00472Q9H8W2 130 aa6.29□□□□□ -1.4
CCDC40-210ENST00000573903 C14orf132Q9NPU4 83 aa6.29□□□□□ -1.4
CCDC40-210ENST00000573903 SPCS1Q9Y6A9 102 aa6.29□□□□□ -1.4
CCDC40-210ENST00000573903 J3KT08 172 aa6.27□□□□□ -1.41
CCDC40-210ENST00000573903 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
CCDC40-210ENST00000573903 C20orf166-AS1Q96NR2 134 aa6.27□□□□□ -1.41
CCDC40-210ENST00000573903 DSCR10P59022 87 aa6.26□□□□□ -1.41
CCDC40-210ENST00000573903 DEFB116Q30KQ4 102 aa6.26□□□□□ -1.41
CCDC40-210ENST00000573903 LINC00313P59037 77 aa6.25□□□□□ -1.41
CCDC40-210ENST00000573903 A8MUU9 505 aa6.24□□□□□ -1.41
CCDC40-210ENST00000573903 IGHV6-1A0A0B4J1U7 121 aa6.23□□□□□ -1.41
CCDC40-210ENST00000573903 A0A1B0GVX0 72 aa6.23□□□□□ -1.41
CCDC40-210ENST00000573903 C8orf87E5RJ46 101 aa6.23□□□□□ -1.41
CCDC40-210ENST00000573903 FAM236DA0A1B0GTK5 79 aa6.21□□□□□ -1.42
CCDC40-210ENST00000573903 K7EP34 96 aa6.21□□□□□ -1.42
CCDC40-210ENST00000573903 NDUFB1O75438 58 aa6.21□□□□□ -1.42
CCDC40-210ENST00000573903 FAM236CP0DP71 79 aa6.21□□□□□ -1.42
CCDC40-210ENST00000573903 KRTAP16-1A8MUX0 517 aa6.19□□□□□ -1.42
CCDC40-210ENST00000573903 NREPQ16612 68 aa6.19□□□□□ -1.42
CCDC40-210ENST00000573903 KRTAP9-8Q9BYQ0 159 aa6.19□□□□□ -1.42
CCDC40-210ENST00000573903 KRTAP9-7A8MTY7 169 aa6.17□□□□□ -1.42
CCDC40-210ENST00000573903 A8MWP4 228 aa6.17□□□□□ -1.42
CCDC40-210ENST00000573903 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
CCDC40-210ENST00000573903 GTF2H5Q6ZYL4 71 aa6.17□□□□□ -1.42
CCDC40-210ENST00000573903 NOTCH2NLQ7Z3S9 236 aa6.17□□□□□ -1.42
CCDC40-210ENST00000573903 A0A1B0GV90 55 aa6.16□□□□□ -1.42
CCDC40-210ENST00000573903 RBM12B-AS1Q9P1G2 102 aa6.16□□□□□ -1.42
CCDC40-210ENST00000573903 SMCPP49901 116 aaPredicted RBP6.15□□□□□ -1.42
CCDC40-210ENST00000573903 PRO0461Q9UI25 63 aa6.14□□□□□ -1.43
CCDC40-210ENST00000573903 IGKV3D-7A0A0C4DH55 119 aa6.12□□□□□ -1.43
CCDC40-210ENST00000573903 C8orf17Q9NRJ1 99 aa6.12□□□□□ -1.43
CCDC40-210ENST00000573903 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
CCDC40-210ENST00000573903 BPY2O14599 106 aa6.1□□□□□ -1.43
CCDC40-210ENST00000573903 MT2AP02795 61 aa6.1□□□□□ -1.43
CCDC40-210ENST00000573903 F8W1H4 67 aa6.09□□□□□ -1.43
CCDC40-210ENST00000573903 Q6ZVQ6 151 aa6.09□□□□□ -1.43
CCDC40-210ENST00000573903 K7EQZ3 153 aa6.07□□□□□ -1.44
CCDC40-210ENST00000573903 HRES1P13985 223 aa6.07□□□□□ -1.44
CCDC40-210ENST00000573903 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
CCDC40-210ENST00000573903 Q8N9P0 234 aaPredicted RBP6.07□□□□□ -1.44
CCDC40-210ENST00000573903 UBL5Q9BZL1 73 aa6.07□□□□□ -1.44
CCDC40-210ENST00000573903 MMP24-AS1A0A0U1RRL7 71 aa6.06□□□□□ -1.44
CCDC40-210ENST00000573903 ZCCHC13Q8WW36 166 aaKnown RBP6.06□□□□□ -1.44
CCDC40-210ENST00000573903 MT1FP04733 61 aa6.05□□□□□ -1.44
CCDC40-210ENST00000573903 MPLKIPQ8TAP9 179 aa6.05□□□□□ -1.44
CCDC40-210ENST00000573903 TMEM254Q8TBM7 123 aa6.05□□□□□ -1.44
CCDC40-210ENST00000573903 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
CCDC40-210ENST00000573903 hDV103S1A0JD37 113 aa6.03□□□□□ -1.44
CCDC40-210ENST00000573903 ETDBQ3ZM63 59 aa6.03□□□□□ -1.44
CCDC40-210ENST00000573903 LINC00846Q9NV44 126 aa6.03□□□□□ -1.44
CCDC40-210ENST00000573903 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
CCDC40-210ENST00000573903 USH2AO75445 5202 aa6.02□□□□□ -1.45
CCDC40-210ENST00000573903 LCE2BO14633 110 aa6.01□□□□□ -1.45
CCDC40-210ENST00000573903 SSPOA2VEC9 5147 aa6.01□□□□□ -1.45
CCDC40-210ENST00000573903 NDUFS5O43920 106 aa6□□□□□ -1.45
CCDC40-210ENST00000573903 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
CCDC40-210ENST00000573903 Q8N9L7 120 aa5.99□□□□□ -1.45
CCDC40-210ENST00000573903 CASC2Q6XLA1 102 aa5.98□□□□□ -1.45
CCDC40-210ENST00000573903 WFDC13Q8IUB5 93 aa5.97□□□□□ -1.45
CCDC40-210ENST00000573903 SPINK7P58062 85 aa5.96□□□□□ -1.46
CCDC40-210ENST00000573903 HCG22E2RYF7 251 aa5.94□□□□□ -1.46
CCDC40-210ENST00000573903 CXCL6P80162 114 aa5.94□□□□□ -1.46
CCDC40-210ENST00000573903 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
CCDC40-210ENST00000573903 ACYP1P07311 99 aa5.92□□□□□ -1.46
CCDC40-210ENST00000573903 FAM240AA0A1B0GVK7 77 aa5.91□□□□□ -1.46
CCDC40-210ENST00000573903 ATP5EP2Q5VTU8 51 aa5.88□□□□□ -1.47
CCDC40-210ENST00000573903 C7orf65Q6ZTY9 151 aa5.88□□□□□ -1.47
CCDC40-210ENST00000573903 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
CCDC40-210ENST00000573903 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
CCDC40-210ENST00000573903 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
CCDC40-210ENST00000573903 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
CCDC40-210ENST00000573903 J3QR89 54 aa5.84□□□□□ -1.47
CCDC40-210ENST00000573903 Q5W150 140 aa5.84□□□□□ -1.47
CCDC40-210ENST00000573903 K7ERU9 68 aa5.83□□□□□ -1.48
CCDC40-210ENST00000573903 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
CCDC40-210ENST00000573903 HIST1H4AP62805 103 aaKnown RBP5.79□□□□□ -1.48
CCDC40-210ENST00000573903 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.49
CCDC40-210ENST00000573903 H1FX-AS1Q4G0G2 97 aa5.77□□□□□ -1.49
CCDC40-210ENST00000573903 LINC00643Q86TS7 51 aa5.77□□□□□ -1.49
CCDC40-210ENST00000573903 TRAV22A0A0B4J277 110 aa5.73□□□□□ -1.49
CCDC40-210ENST00000573903 C4orf26Q17RF5 130 aa5.71□□□□□ -1.5
CCDC40-210ENST00000573903 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.5
CCDC40-210ENST00000573903 A0A087WVE0 104 aa5.69□□□□□ -1.5
CCDC40-210ENST00000573903 LOC101927531A0A1B0GV80 90 aa5.68□□□□□ -1.5
CCDC40-210ENST00000573903 UQCRQO14949 82 aa5.68□□□□□ -1.5
CCDC40-210ENST00000573903 ATOX1O00244 68 aa5.67□□□□□ -1.5
CCDC40-210ENST00000573903 H0Y9P7 68 aa5.65□□□□□ -1.5
CCDC40-210ENST00000573903 C1orf64Q8NEQ6 169 aa5.64□□□□□ -1.51
CCDC40-210ENST00000573903 CYP4F30PQ9H0H9 118 aa5.64□□□□□ -1.51
CCDC40-210ENST00000573903 FAM236AA0A1B0GUQ0 79 aa5.62□□□□□ -1.51
CCDC40-210ENST00000573903 FAM236BA0A1B0GV22 79 aa5.62□□□□□ -1.51
CCDC40-210ENST00000573903 S4R3F8 94 aa5.61□□□□□ -1.51
CCDC40-210ENST00000573903 MP68P56378 58 aa5.59□□□□□ -1.51
CCDC40-210ENST00000573903 A6NN06 94 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms