RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
NPLOC4-210ENST00000572824 VAMP3Q15836 100 aa4.7□□□□□ -1.66
NPLOC4-210ENST00000572824 BVES-AS1Q5T3Y7 98 aa4.7□□□□□ -1.66
NPLOC4-210ENST00000572824 Q6JHZ5 121 aa4.7□□□□□ -1.66
NPLOC4-210ENST00000572824 DSCR10P59022 87 aa4.69□□□□□ -1.66
NPLOC4-210ENST00000572824 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.69□□□□□ -1.66
NPLOC4-210ENST00000572824 ATP11AUNQ6ZP68 121 aa4.68□□□□□ -1.66
NPLOC4-210ENST00000572824 GTF2H5Q6ZYL4 71 aa4.68□□□□□ -1.66
NPLOC4-210ENST00000572824 HIST1H4GQ99525 98 aa4.68□□□□□ -1.66
NPLOC4-210ENST00000572824 A0A087WSZ3 146 aa4.67□□□□□ -1.66
NPLOC4-210ENST00000572824 A8MUU9 505 aa4.67□□□□□ -1.66
NPLOC4-210ENST00000572824 LST1O00453 97 aa4.67□□□□□ -1.66
NPLOC4-210ENST00000572824 Q6ZVQ6 151 aa4.67□□□□□ -1.66
NPLOC4-210ENST00000572824 C20orf166-AS1Q96NR2 134 aa4.67□□□□□ -1.66
NPLOC4-210ENST00000572824 SIGMAR1Q99720 223 aa4.67□□□□□ -1.66
NPLOC4-210ENST00000572824 K7EP34 96 aa4.66□□□□□ -1.66
NPLOC4-210ENST00000572824 C2orf91Q6ZV80 131 aa4.66□□□□□ -1.66
NPLOC4-210ENST00000572824 A0A1W2PNM2 257 aa4.65□□□□□ -1.67
NPLOC4-210ENST00000572824 MT2AP02795 61 aa4.65□□□□□ -1.67
NPLOC4-210ENST00000572824 COX8AP10176 69 aa4.65□□□□□ -1.67
NPLOC4-210ENST00000572824 HSD52Q0P140 79 aa4.65□□□□□ -1.67
NPLOC4-210ENST00000572824 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
NPLOC4-210ENST00000572824 MT1FP04733 61 aa4.64□□□□□ -1.67
NPLOC4-210ENST00000572824 NDUFV3P56181 108 aaKnown RBP4.64□□□□□ -1.67
NPLOC4-210ENST00000572824 DEFB116Q30KQ4 102 aa4.62□□□□□ -1.67
NPLOC4-210ENST00000572824 J3QR89 54 aa4.61□□□□□ -1.67
NPLOC4-210ENST00000572824 FXYD2P54710 66 aa4.61□□□□□ -1.67
NPLOC4-210ENST00000572824 PPDPFLQ8WWR9 84 aa4.61□□□□□ -1.67
NPLOC4-210ENST00000572824 RAB37Q96AX2 223 aa4.61□□□□□ -1.67
NPLOC4-210ENST00000572824 H3BMG7 143 aa4.6□□□□□ -1.67
NPLOC4-210ENST00000572824 FABP2P12104 132 aa4.6□□□□□ -1.67
NPLOC4-210ENST00000572824 HRES1P13985 223 aa4.6□□□□□ -1.67
NPLOC4-210ENST00000572824 TEN1Q86WV5 123 aa4.6□□□□□ -1.67
NPLOC4-210ENST00000572824 A0A0B4J2C4 111 aa4.59□□□□□ -1.67
NPLOC4-210ENST00000572824 A0A1W2PPM0 123 aa4.59□□□□□ -1.67
NPLOC4-210ENST00000572824 F8W1H4 67 aa4.59□□□□□ -1.67
NPLOC4-210ENST00000572824 K7ERJ3 54 aa4.59□□□□□ -1.67
NPLOC4-210ENST00000572824 SS18L2Q9UHA2 77 aa4.59□□□□□ -1.67
NPLOC4-210ENST00000572824 HIGD1BQ9P298 99 aa4.57□□□□□ -1.68
NPLOC4-210ENST00000572824 IGKV4-1P06312 121 aa4.56□□□□□ -1.68
NPLOC4-210ENST00000572824 CEND1Q8N111 149 aa4.56□□□□□ -1.68
NPLOC4-210ENST00000572824 SPCS1Q9Y6A9 102 aa4.56□□□□□ -1.68
NPLOC4-210ENST00000572824 FAM236DA0A1B0GTK5 79 aa4.55□□□□□ -1.68
NPLOC4-210ENST00000572824 H0YGX0 51 aa4.55□□□□□ -1.68
NPLOC4-210ENST00000572824 FAM236CP0DP71 79 aa4.55□□□□□ -1.68
NPLOC4-210ENST00000572824 PRO0461Q9UI25 63 aa4.55□□□□□ -1.68
NPLOC4-210ENST00000572824 TRBV20-1A0A075B6N2 111 aa4.54□□□□□ -1.68
NPLOC4-210ENST00000572824 OCR1Q9BZK8 76 aa4.54□□□□□ -1.68
NPLOC4-210ENST00000572824 PRO1854Q9UHT4 67 aa4.54□□□□□ -1.68
NPLOC4-210ENST00000572824 IGHV6-1A0A0B4J1U7 121 aa4.53□□□□□ -1.68
NPLOC4-210ENST00000572824 LINC00313P59037 77 aa4.53□□□□□ -1.68
NPLOC4-210ENST00000572824 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
NPLOC4-210ENST00000572824 LINC00472Q9H8W2 130 aa4.53□□□□□ -1.68
NPLOC4-210ENST00000572824 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
NPLOC4-210ENST00000572824 ANKRD29Q8N6D5 301 aa4.51□□□□□ -1.69
NPLOC4-210ENST00000572824 MACF1Q9UPN3 7388 aaKnown RBP4.5□□□□□ -1.69
NPLOC4-210ENST00000572824 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
NPLOC4-210ENST00000572824 CCKP06307 115 aa4.5□□□□□ -1.69
NPLOC4-210ENST00000572824 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
NPLOC4-210ENST00000572824 TRBV7-4A0A0J9YYF1 115 aa4.49□□□□□ -1.69
NPLOC4-210ENST00000572824 A0A1B0GX51 115 aa4.49□□□□□ -1.69
NPLOC4-210ENST00000572824 ORMDL1Q9P0S3 153 aa4.49□□□□□ -1.69
NPLOC4-210ENST00000572824 TRACP01848 142 aa4.47□□□□□ -1.69
NPLOC4-210ENST00000572824 PSMB2P49721 201 aa4.47□□□□□ -1.69
NPLOC4-210ENST00000572824 A0A1B0GVX0 72 aa4.46□□□□□ -1.7
NPLOC4-210ENST00000572824 SNCGO76070 127 aa4.46□□□□□ -1.7
NPLOC4-210ENST00000572824 DNAL4O96015 105 aa4.46□□□□□ -1.7
NPLOC4-210ENST00000572824 MT-ATP8P03928 68 aa4.46□□□□□ -1.7
NPLOC4-210ENST00000572824 ETDBQ3ZM63 59 aa4.46□□□□□ -1.7
NPLOC4-210ENST00000572824 C5orf47Q569G3 176 aa4.46□□□□□ -1.7
NPLOC4-210ENST00000572824 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
NPLOC4-210ENST00000572824 ANAPC13Q9BS18 74 aa4.46□□□□□ -1.7
NPLOC4-210ENST00000572824 RBM12B-AS1Q9P1G2 102 aa4.45□□□□□ -1.7
NPLOC4-210ENST00000572824 SMIM20Q8N5G0 67 aa4.44□□□□□ -1.7
NPLOC4-210ENST00000572824 ZCCHC13Q8WW36 166 aaKnown RBP4.44□□□□□ -1.7
NPLOC4-210ENST00000572824 SPINK7P58062 85 aa4.43□□□□□ -1.7
NPLOC4-210ENST00000572824 NAA38Q9BRA0 125 aaKnown RBP4.43□□□□□ -1.7
NPLOC4-210ENST00000572824 TMEM256-PLSCR3K7ERE1 68 aa4.42□□□□□ -1.7
NPLOC4-210ENST00000572824 RPS28P62857 69 aaKnown RBP4.42□□□□□ -1.7
NPLOC4-210ENST00000572824 WFDC13Q8IUB5 93 aa4.41□□□□□ -1.7
NPLOC4-210ENST00000572824 C8orf87E5RJ46 101 aa4.4□□□□□ -1.71
NPLOC4-210ENST00000572824 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
NPLOC4-210ENST00000572824 LYRM7Q5U5X0 104 aa4.4□□□□□ -1.71
NPLOC4-210ENST00000572824 CCDC179H3BU77 68 aa4.39□□□□□ -1.71
NPLOC4-210ENST00000572824 RBM3P98179 157 aaKnown RBP4.39□□□□□ -1.71
NPLOC4-210ENST00000572824 IGKV3D-7A0A0C4DH55 119 aa4.38□□□□□ -1.71
NPLOC4-210ENST00000572824 Q6ZQT0 140 aa4.38□□□□□ -1.71
NPLOC4-210ENST00000572824 C8orf17Q9NRJ1 99 aa4.38□□□□□ -1.71
NPLOC4-210ENST00000572824 FAM240AA0A1B0GVK7 77 aa4.37□□□□□ -1.71
NPLOC4-210ENST00000572824 COX6CP09669 75 aa4.37□□□□□ -1.71
NPLOC4-210ENST00000572824 BAALC-AS2P0C853 105 aa4.37□□□□□ -1.71
NPLOC4-210ENST00000572824 IMUPQ9GZP8 106 aa4.37□□□□□ -1.71
NPLOC4-210ENST00000572824 SCGB1C2P0DMR2 95 aa4.36□□□□□ -1.71
NPLOC4-210ENST00000572824 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
NPLOC4-210ENST00000572824 DSCR8Q96T75 97 aa4.36□□□□□ -1.71
NPLOC4-210ENST00000572824 C9JAW5 83 aa4.34□□□□□ -1.71
NPLOC4-210ENST00000572824 H3BQ85 93 aa4.34□□□□□ -1.71
NPLOC4-210ENST00000572824 C14orf132Q9NPU4 83 aa4.34□□□□□ -1.71
NPLOC4-210ENST00000572824 MMP24-AS1A0A0U1RRL7 71 aa4.33□□□□□ -1.72
NPLOC4-210ENST00000572824 A8MWP4 228 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms