RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 COX7CP15954 63 aa2.72□□□□□ -1.97
NDE1-204ENST00000572503 C9orf153Q5TBE3 101 aa2.72□□□□□ -1.97
NDE1-204ENST00000572503 SSBP3-AS1Q7Z2R9 100 aa2.72□□□□□ -1.97
NDE1-204ENST00000572503 KRTAP9-3Q9BYQ3 159 aa2.72□□□□□ -1.97
NDE1-204ENST00000572503 KRTAP29-1A8MX34 341 aaPredicted RBP2.71□□□□□ -1.98
NDE1-204ENST00000572503 ASB16-AS1Q495Z4 193 aa2.71□□□□□ -1.98
NDE1-204ENST00000572503 Q5XG85 94 aa2.71□□□□□ -1.98
NDE1-204ENST00000572503 SERP2Q8N6R1 65 aa2.71□□□□□ -1.98
NDE1-204ENST00000572503 TRAV7A0A075B6U4 112 aa2.7□□□□□ -1.98
NDE1-204ENST00000572503 A8MWP4 228 aa2.7□□□□□ -1.98
NDE1-204ENST00000572503 UQCRQO14949 82 aa2.7□□□□□ -1.98
NDE1-204ENST00000572503 SPINK6Q6UWN8 80 aa2.7□□□□□ -1.98
NDE1-204ENST00000572503 PRR15Q8IV56 129 aa2.7□□□□□ -1.98
NDE1-204ENST00000572503 OCR1Q9BZK8 76 aa2.7□□□□□ -1.98
NDE1-204ENST00000572503 LRP1Q07954 4544 aaKnown RBP2.7□□□□□ -1.98
NDE1-204ENST00000572503 KIAA1109Q2LD37 5005 aa2.69□□□□□ -1.98
NDE1-204ENST00000572503 EPPK1P58107 5090 aaKnown RBP2.69□□□□□ -1.98
NDE1-204ENST00000572503 J3KT08 172 aa2.69□□□□□ -1.98
NDE1-204ENST00000572503 DEFB116Q30KQ4 102 aa2.69□□□□□ -1.98
NDE1-204ENST00000572503 SS18L2Q9UHA2 77 aa2.69□□□□□ -1.98
NDE1-204ENST00000572503 MMP24-AS1A0A0U1RRL7 71 aa2.68□□□□□ -1.98
NDE1-204ENST00000572503 HCG22E2RYF7 251 aa2.68□□□□□ -1.98
NDE1-204ENST00000572503 SMIM20Q8N5G0 67 aa2.68□□□□□ -1.98
NDE1-204ENST00000572503 CYSTM1Q9H1C7 97 aa2.68□□□□□ -1.98
NDE1-204ENST00000572503 FLG2Q5D862 2391 aaPredicted RBP2.67□□□□□ -1.98
NDE1-204ENST00000572503 SMR3BP02814 79 aaPredicted RBP2.67□□□□□ -1.98
NDE1-204ENST00000572503 HRCT1Q6UXD1 115 aa2.67□□□□□ -1.98
NDE1-204ENST00000572503 A0A1B0GVX0 72 aa2.66□□□□□ -1.98
NDE1-204ENST00000572503 CDK2AP2O75956 126 aa2.66□□□□□ -1.98
NDE1-204ENST00000572503 KLKP1Q107X0 134 aa2.66□□□□□ -1.98
NDE1-204ENST00000572503 C1orf195Q5TG92 126 aa2.66□□□□□ -1.98
NDE1-204ENST00000572503 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
NDE1-204ENST00000572503 A0A0U1RQV1 116 aa2.65□□□□□ -1.99
NDE1-204ENST00000572503 PLA2G1BP04054 148 aaKnown RBP2.65□□□□□ -1.99
NDE1-204ENST00000572503 RPS29P62273 56 aaKnown RBP2.65□□□□□ -1.99
NDE1-204ENST00000572503 NOTCH2NLQ7Z3S9 236 aa2.65□□□□□ -1.99
NDE1-204ENST00000572503 PRR26Q8N8Z3 221 aa2.65□□□□□ -1.99
NDE1-204ENST00000572503 ZCCHC13Q8WW36 166 aaKnown RBP2.65□□□□□ -1.99
NDE1-204ENST00000572503 C8orf17Q9NRJ1 99 aa2.65□□□□□ -1.99
NDE1-204ENST00000572503 BIRC6Q9NR09 4857 aa2.64□□□□□ -1.99
NDE1-204ENST00000572503 CASC2Q6XLA1 102 aa2.64□□□□□ -1.99
NDE1-204ENST00000572503 WFDC13Q8IUB5 93 aa2.64□□□□□ -1.99
NDE1-204ENST00000572503 C20orf197Q8N268 126 aa2.64□□□□□ -1.99
NDE1-204ENST00000572503 TYMSOSQ8TAI1 123 aa2.64□□□□□ -1.99
NDE1-204ENST00000572503 MYCBP2O75592 4640 aa2.64□□□□□ -1.99
NDE1-204ENST00000572503 HERC2O95714 4834 aa2.64□□□□□ -1.99
NDE1-204ENST00000572503 KRTAP16-1A8MUX0 517 aa2.63□□□□□ -1.99
NDE1-204ENST00000572503 H7BZZ5 65 aa2.63□□□□□ -1.99
NDE1-204ENST00000572503 NDUFB1O75438 58 aa2.63□□□□□ -1.99
NDE1-204ENST00000572503 SPINK1P00995 79 aa2.63□□□□□ -1.99
NDE1-204ENST00000572503 KRTAP13-3Q3SY46 172 aa2.63□□□□□ -1.99
NDE1-204ENST00000572503 TMEM254Q8TBM7 123 aa2.63□□□□□ -1.99
NDE1-204ENST00000572503 hDV103S1A0JD37 113 aa2.62□□□□□ -1.99
NDE1-204ENST00000572503 C8orf87E5RJ46 101 aa2.62□□□□□ -1.99
NDE1-204ENST00000572503 KRTAP10-8P60410 259 aa2.62□□□□□ -1.99
NDE1-204ENST00000572503 SPAG11AQ6PDA7 123 aa2.62□□□□□ -1.99
NDE1-204ENST00000572503 LINC00304Q8N9R0 145 aa2.62□□□□□ -1.99
NDE1-204ENST00000572503 LIMD2Q9BT23 127 aa2.62□□□□□ -1.99
NDE1-204ENST00000572503 IGHV6-1A0A0B4J1U7 121 aa2.61□□□□□ -1.99
NDE1-204ENST00000572503 TMEM258P61165 79 aa2.61□□□□□ -1.99
NDE1-204ENST00000572503 Q5VSD8 79 aa2.61□□□□□ -1.99
NDE1-204ENST00000572503 MRPL34Q9BQ48 92 aaKnown RBP2.61□□□□□ -1.99
NDE1-204ENST00000572503 SNURFQ9Y675 71 aa2.61□□□□□ -1.99
NDE1-204ENST00000572503 FAM229AH3BQW9 127 aa2.6□□□□□ -1.99
NDE1-204ENST00000572503 C5orf47Q569G3 176 aa2.6□□□□□ -1.99
NDE1-204ENST00000572503 Q8N9P0 234 aaPredicted RBP2.6□□□□□ -1.99
NDE1-204ENST00000572503 DMBT1Q9UGM3 2413 aaPredicted RBP2.59□□□□□ -1.99
NDE1-204ENST00000572503 H3BPC8 53 aa2.59□□□□□ -1.99
NDE1-204ENST00000572503 NDUFC1O43677 76 aa2.59□□□□□ -1.99
NDE1-204ENST00000572503 MT1HL1P0DM35 61 aa2.59□□□□□ -1.99
NDE1-204ENST00000572503 Q8N1X5 172 aa2.59□□□□□ -1.99
NDE1-204ENST00000572503 TP53AIP1Q9HCN2 124 aa2.59□□□□□ -1.99
NDE1-204ENST00000572503 ABCA13Q86UQ4 5058 aa2.59□□□□□ -2
NDE1-204ENST00000572503 TRAV22A0A0B4J277 110 aa2.58□□□□□ -2
NDE1-204ENST00000572503 H0Y9P7 68 aa2.58□□□□□ -2
NDE1-204ENST00000572503 C4orf48Q5BLP8 95 aa2.58□□□□□ -2
NDE1-204ENST00000572503 Q5W150 140 aa2.58□□□□□ -2
NDE1-204ENST00000572503 FAM236DA0A1B0GTK5 79 aa2.57□□□□□ -2
NDE1-204ENST00000572503 OXTP01178 125 aa2.57□□□□□ -2
NDE1-204ENST00000572503 FAM236CP0DP71 79 aa2.57□□□□□ -2
NDE1-204ENST00000572503 LINC00313P59037 77 aa2.57□□□□□ -2
NDE1-204ENST00000572503 MP68P56378 58 aa2.56□□□□□ -2
NDE1-204ENST00000572503 ATP5EP56381 51 aaPredicted RBP2.56□□□□□ -2
NDE1-204ENST00000572503 RPS28P62857 69 aaKnown RBP2.56□□□□□ -2
NDE1-204ENST00000572503 LINC00208Q96KT6 92 aa2.56□□□□□ -2
NDE1-204ENST00000572503 A8MUU9 505 aa2.55□□□□□ -2
NDE1-204ENST00000572503 C1orf64Q8NEQ6 169 aa2.55□□□□□ -2
NDE1-204ENST00000572503 C20orf166-AS1Q96NR2 134 aa2.55□□□□□ -2
NDE1-204ENST00000572503 CYP4F30PQ9H0H9 118 aa2.55□□□□□ -2
NDE1-204ENST00000572503 SPANXA2-OT1Q8N9U9 137 aa2.54□□□□□ -2
NDE1-204ENST00000572503 LOC101927531A0A1B0GV80 90 aa2.53□□□□□ -2
NDE1-204ENST00000572503 NDUFS5O43920 106 aa2.53□□□□□ -2
NDE1-204ENST00000572503 SERP1Q9Y6X1 66 aa2.53□□□□□ -2
NDE1-204ENST00000572503 IGLV7-46A0A075B6I9 117 aa2.52□□□□□ -2.01
NDE1-204ENST00000572503 IGKV2-30P06310 120 aa2.52□□□□□ -2.01
NDE1-204ENST00000572503 FP248Q71RG6 208 aaPredicted RBP2.52□□□□□ -2.01
NDE1-204ENST00000572503 RETNLBQ9BQ08 111 aa2.52□□□□□ -2.01
NDE1-204ENST00000572503 Q75L30 129 aa2.5□□□□□ -2.01
NDE1-204ENST00000572503 LRP2P98164 4655 aa2.5□□□□□ -2.01
NDE1-204ENST00000572503 MUC17Q685J3 4493 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms