RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
TRAPPC1-204ENST00000571947 TYMSOSQ8TAI1 123 aa3.56□□□□□ -1.84
TRAPPC1-204ENST00000571947 VPS13BQ7Z7G8 4022 aa3.55□□□□□ -1.84
TRAPPC1-204ENST00000571947 KRTAP29-1A8MX34 341 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC1-204ENST00000571947 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
TRAPPC1-204ENST00000571947 OCR1Q9BZK8 76 aa3.55□□□□□ -1.84
TRAPPC1-204ENST00000571947 PKHD1L1Q86WI1 4243 aa3.55□□□□□ -1.84
TRAPPC1-204ENST00000571947 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
TRAPPC1-204ENST00000571947 KMT2CQ8NEZ4 4911 aaKnown RBP3.54□□□□□ -1.84
TRAPPC1-204ENST00000571947 MMP24-AS1A0A0U1RRL7 71 aa3.54□□□□□ -1.84
TRAPPC1-204ENST00000571947 A0A1B0GVX0 72 aa3.54□□□□□ -1.84
TRAPPC1-204ENST00000571947 CASC2Q6XLA1 102 aa3.54□□□□□ -1.84
TRAPPC1-204ENST00000571947 WFDC13Q8IUB5 93 aa3.54□□□□□ -1.84
TRAPPC1-204ENST00000571947 LIMD2Q9BT23 127 aa3.54□□□□□ -1.84
TRAPPC1-204ENST00000571947 SPINK1P00995 79 aa3.53□□□□□ -1.84
TRAPPC1-204ENST00000571947 SPAG11AQ6PDA7 123 aa3.53□□□□□ -1.84
TRAPPC1-204ENST00000571947 LINC00304Q8N9R0 145 aa3.53□□□□□ -1.84
TRAPPC1-204ENST00000571947 C8orf17Q9NRJ1 99 aa3.53□□□□□ -1.84
TRAPPC1-204ENST00000571947 V9GYY9 64 aa3.53□□□□□ -1.84
TRAPPC1-204ENST00000571947 RPS29P62273 56 aaKnown RBP3.52□□□□□ -1.85
TRAPPC1-204ENST00000571947 C1orf195Q5TG92 126 aa3.52□□□□□ -1.85
TRAPPC1-204ENST00000571947 Q5VSD8 79 aa3.52□□□□□ -1.85
TRAPPC1-204ENST00000571947 IGHV6-1A0A0B4J1U7 121 aa3.51□□□□□ -1.85
TRAPPC1-204ENST00000571947 hDV103S1A0JD37 113 aa3.51□□□□□ -1.85
TRAPPC1-204ENST00000571947 C20orf197Q8N268 126 aa3.51□□□□□ -1.85
TRAPPC1-204ENST00000571947 C8orf87E5RJ46 101 aa3.5□□□□□ -1.85
TRAPPC1-204ENST00000571947 TMEM254Q8TBM7 123 aa3.5□□□□□ -1.85
TRAPPC1-204ENST00000571947 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
TRAPPC1-204ENST00000571947 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
TRAPPC1-204ENST00000571947 KLKP1Q107X0 134 aa3.49□□□□□ -1.85
TRAPPC1-204ENST00000571947 NOTCH2NLQ7Z3S9 236 aa3.49□□□□□ -1.85
TRAPPC1-204ENST00000571947 MRPL34Q9BQ48 92 aaKnown RBP3.49□□□□□ -1.85
TRAPPC1-204ENST00000571947 CYSTM1Q9H1C7 97 aa3.49□□□□□ -1.85
TRAPPC1-204ENST00000571947 A0A0U1RQV1 116 aa3.48□□□□□ -1.85
TRAPPC1-204ENST00000571947 KRTAP17-1Q9BYP8 105 aa3.48□□□□□ -1.85
TRAPPC1-204ENST00000571947 FLG2Q5D862 2391 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC1-204ENST00000571947 LINC00313P59037 77 aa3.47□□□□□ -1.85
TRAPPC1-204ENST00000571947 KRTAP10-8P60410 259 aa3.47□□□□□ -1.85
TRAPPC1-204ENST00000571947 Q8N1X5 172 aa3.47□□□□□ -1.85
TRAPPC1-204ENST00000571947 TP53AIP1Q9HCN2 124 aa3.47□□□□□ -1.85
TRAPPC1-204ENST00000571947 SNURFQ9Y675 71 aa3.47□□□□□ -1.85
TRAPPC1-204ENST00000571947 RYR3Q15413 4870 aa3.47□□□□□ -1.85
TRAPPC1-204ENST00000571947 NDUFC1O43677 76 aa3.46□□□□□ -1.86
TRAPPC1-204ENST00000571947 H0Y9P7 68 aa3.45□□□□□ -1.86
TRAPPC1-204ENST00000571947 H3BPC8 53 aa3.45□□□□□ -1.86
TRAPPC1-204ENST00000571947 H7BZZ5 65 aa3.45□□□□□ -1.86
TRAPPC1-204ENST00000571947 MP68P56378 58 aa3.45□□□□□ -1.86
TRAPPC1-204ENST00000571947 TMEM258P61165 79 aa3.45□□□□□ -1.86
TRAPPC1-204ENST00000571947 ZCCHC13Q8WW36 166 aaKnown RBP3.45□□□□□ -1.86
TRAPPC1-204ENST00000571947 FAT1Q14517 4588 aa3.44□□□□□ -1.86
TRAPPC1-204ENST00000571947 TRAV22A0A0B4J277 110 aa3.44□□□□□ -1.86
TRAPPC1-204ENST00000571947 KRTAP4-8A0A0G2JLE6 195 aa3.44□□□□□ -1.86
TRAPPC1-204ENST00000571947 KRTAP16-1A8MUX0 517 aa3.44□□□□□ -1.86
TRAPPC1-204ENST00000571947 NDUFS5O43920 106 aa3.44□□□□□ -1.86
TRAPPC1-204ENST00000571947 HSPG2P98160 4391 aa3.44□□□□□ -1.86
TRAPPC1-204ENST00000571947 RYR1P21817 5038 aa3.43□□□□□ -1.86
TRAPPC1-204ENST00000571947 Q8N9P0 234 aaPredicted RBP3.43□□□□□ -1.86
TRAPPC1-204ENST00000571947 LINC00208Q96KT6 92 aa3.43□□□□□ -1.86
TRAPPC1-204ENST00000571947 FAM236DA0A1B0GTK5 79 aa3.41□□□□□ -1.86
TRAPPC1-204ENST00000571947 FAM236CP0DP71 79 aa3.41□□□□□ -1.86
TRAPPC1-204ENST00000571947 KRTAP13-3Q3SY46 172 aa3.41□□□□□ -1.86
TRAPPC1-204ENST00000571947 C1orf64Q8NEQ6 169 aa3.41□□□□□ -1.86
TRAPPC1-204ENST00000571947 MT1HL1P0DM35 61 aa3.4□□□□□ -1.87
TRAPPC1-204ENST00000571947 ATP5EP56381 51 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC1-204ENST00000571947 Q5W150 140 aa3.4□□□□□ -1.87
TRAPPC1-204ENST00000571947 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
TRAPPC1-204ENST00000571947 OXTP01178 125 aa3.39□□□□□ -1.87
TRAPPC1-204ENST00000571947 RPS28P62857 69 aaKnown RBP3.39□□□□□ -1.87
TRAPPC1-204ENST00000571947 RETNLBQ9BQ08 111 aa3.39□□□□□ -1.87
TRAPPC1-204ENST00000571947 DMBT1Q9UGM3 2413 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC1-204ENST00000571947 KRTAP19-4Q3LI73 84 aa3.38□□□□□ -1.87
TRAPPC1-204ENST00000571947 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC1-204ENST00000571947 KIAA1109Q2LD37 5005 aa3.37□□□□□ -1.87
TRAPPC1-204ENST00000571947 LOC101927531A0A1B0GV80 90 aa3.37□□□□□ -1.87
TRAPPC1-204ENST00000571947 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
TRAPPC1-204ENST00000571947 TNXBP22105 4242 aa3.36□□□□□ -1.87
TRAPPC1-204ENST00000571947 FAT3Q8TDW7 4589 aa3.36□□□□□ -1.87
TRAPPC1-204ENST00000571947 C9orf92A6NGG3 77 aa3.36□□□□□ -1.87
TRAPPC1-204ENST00000571947 A8MUU9 505 aa3.36□□□□□ -1.87
TRAPPC1-204ENST00000571947 SPANXA2-OT1Q8N9U9 137 aa3.36□□□□□ -1.87
TRAPPC1-204ENST00000571947 C20orf166-AS1Q96NR2 134 aa3.36□□□□□ -1.87
TRAPPC1-204ENST00000571947 KRTAP4-5Q9BYR2 181 aa3.36□□□□□ -1.87
TRAPPC1-204ENST00000571947 EPPK1P58107 5090 aaKnown RBP3.36□□□□□ -1.87
TRAPPC1-204ENST00000571947 IGKV2-30P06310 120 aa3.35□□□□□ -1.87
TRAPPC1-204ENST00000571947 CYP4F30PQ9H0H9 118 aa3.35□□□□□ -1.87
TRAPPC1-204ENST00000571947 SERP1Q9Y6X1 66 aa3.35□□□□□ -1.87
TRAPPC1-204ENST00000571947 LRP1Q07954 4544 aaKnown RBP3.34□□□□□ -1.87
TRAPPC1-204ENST00000571947 PCOTHQ58A44 107 aa3.34□□□□□ -1.87
TRAPPC1-204ENST00000571947 IGLV7-46A0A075B6I9 117 aa3.33□□□□□ -1.88
TRAPPC1-204ENST00000571947 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
TRAPPC1-204ENST00000571947 PRR4Q16378 134 aa3.32□□□□□ -1.88
TRAPPC1-204ENST00000571947 Q75L30 129 aa3.32□□□□□ -1.88
TRAPPC1-204ENST00000571947 IGKV2D-30A0A075B6S6 120 aa3.3□□□□□ -1.88
TRAPPC1-204ENST00000571947 H3BS24 57 aa3.3□□□□□ -1.88
TRAPPC1-204ENST00000571947 HRES1P13985 223 aa3.3□□□□□ -1.88
TRAPPC1-204ENST00000571947 RPL37P61927 97 aaKnown RBP3.29□□□□□ -1.88
TRAPPC1-204ENST00000571947 C7orf65Q6ZTY9 151 aa3.29□□□□□ -1.88
TRAPPC1-204ENST00000571947 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
TRAPPC1-204ENST00000571947 C4orf26Q17RF5 130 aa3.26□□□□□ -1.89
TRAPPC1-204ENST00000571947 TPRXLQ17RH7 258 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms