RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 IGKV4-1P06312 121 aa5.03□□□□□ -1.6
CIITA-207ENST00000571545 UBE2V1Q13404 147 aa5.03□□□□□ -1.6
CIITA-207ENST00000571545 CCKP06307 115 aa5.02□□□□□ -1.61
CIITA-207ENST00000571545 DSCR10P59022 87 aa5.02□□□□□ -1.61
CIITA-207ENST00000571545 UQCR10Q9UDW1 63 aa5.01□□□□□ -1.61
CIITA-207ENST00000571545 C9orf118A6NHY6 69 aa5□□□□□ -1.61
CIITA-207ENST00000571545 K7ERJ3 54 aa5□□□□□ -1.61
CIITA-207ENST00000571545 PYY3Q5JQD4 70 aa5□□□□□ -1.61
CIITA-207ENST00000571545 DSCR8Q96T75 97 aa4.99□□□□□ -1.61
CIITA-207ENST00000571545 RBM12B-AS1Q9P1G2 102 aa4.99□□□□□ -1.61
CIITA-207ENST00000571545 A0A1B0GV72 72 aa4.98□□□□□ -1.61
CIITA-207ENST00000571545 C8orf87E5RJ46 101 aa4.98□□□□□ -1.61
CIITA-207ENST00000571545 SCGB1C2P0DMR2 95 aa4.98□□□□□ -1.61
CIITA-207ENST00000571545 RBM3P98179 157 aaKnown RBP4.98□□□□□ -1.61
CIITA-207ENST00000571545 FAM236DA0A1B0GTK5 79 aa4.97□□□□□ -1.61
CIITA-207ENST00000571545 FAM236CP0DP71 79 aa4.97□□□□□ -1.61
CIITA-207ENST00000571545 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
CIITA-207ENST00000571545 IGHV6-1A0A0B4J1U7 121 aa4.96□□□□□ -1.62
CIITA-207ENST00000571545 KRTAP16-1A8MUX0 517 aa4.96□□□□□ -1.62
CIITA-207ENST00000571545 J3KT08 172 aa4.96□□□□□ -1.62
CIITA-207ENST00000571545 VPS25Q9BRG1 176 aa4.96□□□□□ -1.62
CIITA-207ENST00000571545 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
CIITA-207ENST00000571545 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
CIITA-207ENST00000571545 A0A1B0GVX0 72 aa4.94□□□□□ -1.62
CIITA-207ENST00000571545 C9JAW5 83 aa4.94□□□□□ -1.62
CIITA-207ENST00000571545 MTURNQ8N3F0 131 aa4.94□□□□□ -1.62
CIITA-207ENST00000571545 A0A1B0GW54 56 aa4.93□□□□□ -1.62
CIITA-207ENST00000571545 DEFB116Q30KQ4 102 aa4.93□□□□□ -1.62
CIITA-207ENST00000571545 JMJD7-PLA2G4BH0Y9G9 81 aa4.92□□□□□ -1.62
CIITA-207ENST00000571545 M0R143 59 aa4.92□□□□□ -1.62
CIITA-207ENST00000571545 NDUFB1O75438 58 aa4.92□□□□□ -1.62
CIITA-207ENST00000571545 BAALC-AS2P0C853 105 aa4.91□□□□□ -1.62
CIITA-207ENST00000571545 PDE6GP18545 87 aa4.91□□□□□ -1.62
CIITA-207ENST00000571545 ATXN8Q156A1 80 aa4.9□□□□□ -1.63
CIITA-207ENST00000571545 LYRM7Q5U5X0 104 aa4.9□□□□□ -1.63
CIITA-207ENST00000571545 NOTCH2NLQ7Z3S9 236 aa4.9□□□□□ -1.63
CIITA-207ENST00000571545 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
CIITA-207ENST00000571545 TMA7Q9Y2S6 64 aaKnown RBP4.9□□□□□ -1.63
CIITA-207ENST00000571545 HRES1P13985 223 aa4.89□□□□□ -1.63
CIITA-207ENST00000571545 Q6ZQT0 140 aa4.89□□□□□ -1.63
CIITA-207ENST00000571545 ZCCHC13Q8WW36 166 aaKnown RBP4.88□□□□□ -1.63
CIITA-207ENST00000571545 KRTAP9-8Q9BYQ0 159 aa4.88□□□□□ -1.63
CIITA-207ENST00000571545 LOC110117498A0A087WWA1 95 aa4.87□□□□□ -1.63
CIITA-207ENST00000571545 A8MWP4 228 aa4.86□□□□□ -1.63
CIITA-207ENST00000571545 Q8N9P0 234 aaPredicted RBP4.85□□□□□ -1.63
CIITA-207ENST00000571545 SPINK7P58062 85 aa4.83□□□□□ -1.64
CIITA-207ENST00000571545 C8orf17Q9NRJ1 99 aa4.83□□□□□ -1.64
CIITA-207ENST00000571545 SMIM6P0DI80 62 aa4.82□□□□□ -1.64
CIITA-207ENST00000571545 MT2AP02795 61 aa4.81□□□□□ -1.64
CIITA-207ENST00000571545 NREPQ16612 68 aa4.81□□□□□ -1.64
CIITA-207ENST00000571545 Q6ZVQ6 151 aa4.81□□□□□ -1.64
CIITA-207ENST00000571545 C14orf132Q9NPU4 83 aa4.8□□□□□ -1.64
CIITA-207ENST00000571545 IGKV3D-7A0A0C4DH55 119 aa4.79□□□□□ -1.64
CIITA-207ENST00000571545 TSTD3H0UI37 97 aa4.79□□□□□ -1.64
CIITA-207ENST00000571545 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
CIITA-207ENST00000571545 PRR15Q8IV56 129 aa4.79□□□□□ -1.64
CIITA-207ENST00000571545 NAA38Q9BRA0 125 aaKnown RBP4.79□□□□□ -1.64
CIITA-207ENST00000571545 WFDC13Q8IUB5 93 aa4.78□□□□□ -1.64
CIITA-207ENST00000571545 TMEM254Q8TBM7 123 aa4.78□□□□□ -1.64
CIITA-207ENST00000571545 H3BT86 120 aa4.77□□□□□ -1.65
CIITA-207ENST00000571545 MT1FP04733 61 aa4.77□□□□□ -1.65
CIITA-207ENST00000571545 MRPL34Q9BQ48 92 aaKnown RBP4.76□□□□□ -1.65
CIITA-207ENST00000571545 LINC00846Q9NV44 126 aa4.76□□□□□ -1.65
CIITA-207ENST00000571545 hDV103S1A0JD37 113 aa4.75□□□□□ -1.65
CIITA-207ENST00000571545 MMP24-AS1A0A0U1RRL7 71 aa4.74□□□□□ -1.65
CIITA-207ENST00000571545 NDUFS5O43920 106 aa4.73□□□□□ -1.65
CIITA-207ENST00000571545 BATFQ16520 125 aa4.73□□□□□ -1.65
CIITA-207ENST00000571545 BPY2O14599 106 aa4.72□□□□□ -1.65
CIITA-207ENST00000571545 USH2AO75445 5202 aa4.72□□□□□ -1.65
CIITA-207ENST00000571545 K7EQZ3 153 aa4.71□□□□□ -1.66
CIITA-207ENST00000571545 C7orf65Q6ZTY9 151 aa4.7□□□□□ -1.66
CIITA-207ENST00000571545 A0A1W2PPM0 123 aa4.69□□□□□ -1.66
CIITA-207ENST00000571545 H1FX-AS1Q4G0G2 97 aa4.69□□□□□ -1.66
CIITA-207ENST00000571545 SSPOA2VEC9 5147 aa4.67□□□□□ -1.66
CIITA-207ENST00000571545 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
CIITA-207ENST00000571545 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
CIITA-207ENST00000571545 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
CIITA-207ENST00000571545 TAX1BP3O14907 124 aa4.65□□□□□ -1.67
CIITA-207ENST00000571545 CXCL6P80162 114 aa4.64□□□□□ -1.67
CIITA-207ENST00000571545 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
CIITA-207ENST00000571545 UBL5Q9BZL1 73 aa4.63□□□□□ -1.67
CIITA-207ENST00000571545 SPCS1Q9Y6A9 102 aa4.63□□□□□ -1.67
CIITA-207ENST00000571545 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
CIITA-207ENST00000571545 HCG22E2RYF7 251 aa4.62□□□□□ -1.67
CIITA-207ENST00000571545 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
CIITA-207ENST00000571545 Q5W150 140 aa4.59□□□□□ -1.67
CIITA-207ENST00000571545 Q8N9L7 120 aa4.59□□□□□ -1.67
CIITA-207ENST00000571545 COL5A1-AS1Q5SY13 56 aa4.57□□□□□ -1.68
CIITA-207ENST00000571545 C4orf26Q17RF5 130 aa4.56□□□□□ -1.68
CIITA-207ENST00000571545 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
CIITA-207ENST00000571545 LOC105371267A0A1B0GV96 52 aa4.55□□□□□ -1.68
CIITA-207ENST00000571545 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
CIITA-207ENST00000571545 FAM236AA0A1B0GUQ0 79 aa4.53□□□□□ -1.68
CIITA-207ENST00000571545 FAM236BA0A1B0GV22 79 aa4.53□□□□□ -1.68
CIITA-207ENST00000571545 K7EP34 96 aa4.53□□□□□ -1.68
CIITA-207ENST00000571545 S4R3F8 94 aa4.53□□□□□ -1.68
CIITA-207ENST00000571545 GTF2H5Q6ZYL4 71 aa4.52□□□□□ -1.69
CIITA-207ENST00000571545 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
CIITA-207ENST00000571545 C5orf47Q569G3 176 aa4.51□□□□□ -1.69
CIITA-207ENST00000571545 PRO0461Q9UI25 63 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms