RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 IGLV6-57P01721 117 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 FAM236CP0DP71 79 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 SPRR1AP35321 89 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 NPC2P61916 151 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 ETDBQ3ZM63 59 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 C9orf153Q5TBE3 101 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 Q6ZRX8 168 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 TEN1Q86WV5 123 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 ANKRD29Q8N6D5 301 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 Q8NDZ9 215 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 HIGD1BQ9P298 99 aa2.17□□□□□ -2.06
NUP88-202ENST00000570937 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
NUP88-202ENST00000570937 PKHD1L1Q86WI1 4243 aa2.16□□□□□ -2.06
NUP88-202ENST00000570937 TRAV13-2A0A0B4J235 113 aa2.16□□□□□ -2.06
NUP88-202ENST00000570937 TRBV7-6A0A0J9YX20 115 aa2.16□□□□□ -2.06
NUP88-202ENST00000570937 COX7CP15954 63 aa2.16□□□□□ -2.06
NUP88-202ENST00000570937 SPAG11AQ6PDA7 123 aa2.16□□□□□ -2.06
NUP88-202ENST00000570937 HRCT1Q6UXD1 115 aa2.16□□□□□ -2.06
NUP88-202ENST00000570937 PRR15Q8IV56 129 aa2.16□□□□□ -2.06
NUP88-202ENST00000570937 PCP2Q8IVA1 136 aa2.16□□□□□ -2.06
NUP88-202ENST00000570937 SMCR5Q8TEV8 140 aa2.16□□□□□ -2.06
NUP88-202ENST00000570937 NAA38Q9BRA0 125 aaKnown RBP2.16□□□□□ -2.06
NUP88-202ENST00000570937 TRBV20-1A0A075B6N2 111 aa2.15□□□□□ -2.07
NUP88-202ENST00000570937 TRACP01848 142 aa2.15□□□□□ -2.07
NUP88-202ENST00000570937 MOBPQ13875 183 aa2.15□□□□□ -2.07
NUP88-202ENST00000570937 SOSTDC1Q6X4U4 206 aa2.15□□□□□ -2.07
NUP88-202ENST00000570937 C2orf91Q6ZV80 131 aa2.15□□□□□ -2.07
NUP88-202ENST00000570937 CAMK2N1Q7Z7J9 78 aa2.15□□□□□ -2.07
NUP88-202ENST00000570937 MUSTN1Q8IVN3 82 aa2.15□□□□□ -2.07
NUP88-202ENST00000570937 LINC00304Q8N9R0 145 aa2.15□□□□□ -2.07
NUP88-202ENST00000570937 SPRR4Q96PI1 79 aa2.15□□□□□ -2.07
NUP88-202ENST00000570937 TTTY13Q9BZ97 58 aa2.15□□□□□ -2.07
NUP88-202ENST00000570937 NHP2Q9NX24 153 aaKnown RBP2.15□□□□□ -2.07
NUP88-202ENST00000570937 SMIM26A0A096LP01 95 aa2.14□□□□□ -2.07
NUP88-202ENST00000570937 ATOX1O00244 68 aa2.14□□□□□ -2.07
NUP88-202ENST00000570937 SLC25A20O43772 301 aa2.14□□□□□ -2.07
NUP88-202ENST00000570937 ACYP1P07311 99 aa2.14□□□□□ -2.07
NUP88-202ENST00000570937 COX7BP24311 80 aa2.14□□□□□ -2.07
NUP88-202ENST00000570937 C6orf99Q4VX62 202 aa2.14□□□□□ -2.07
NUP88-202ENST00000570937 LINC00483Q53H64 154 aa2.14□□□□□ -2.07
NUP88-202ENST00000570937 Q9BRP9 147 aa2.14□□□□□ -2.07
NUP88-202ENST00000570937 FAM236AA0A1B0GUQ0 79 aa2.13□□□□□ -2.07
NUP88-202ENST00000570937 FAM236BA0A1B0GV22 79 aa2.13□□□□□ -2.07
NUP88-202ENST00000570937 SPINK1P00995 79 aa2.13□□□□□ -2.07
NUP88-202ENST00000570937 SCGB1C2P0DMR2 95 aa2.13□□□□□ -2.07
NUP88-202ENST00000570937 ATP5EP56381 51 aaPredicted RBP2.13□□□□□ -2.07
NUP88-202ENST00000570937 ELOF1P60002 83 aaKnown RBP2.13□□□□□ -2.07
NUP88-202ENST00000570937 KRTAP13-2Q52LG2 175 aa2.13□□□□□ -2.07
NUP88-202ENST00000570937 SSBP3-AS1Q7Z2R9 100 aa2.13□□□□□ -2.07
NUP88-202ENST00000570937 SERP1Q9Y6X1 66 aa2.13□□□□□ -2.07
NUP88-202ENST00000570937 RNF213Q63HN8 5207 aa2.13□□□□□ -2.07
NUP88-202ENST00000570937 TEX49A0A1B0GTD5 131 aa2.12□□□□□ -2.07
NUP88-202ENST00000570937 ERC2-IT1O76042 136 aa2.12□□□□□ -2.07
NUP88-202ENST00000570937 RPS29P62273 56 aaKnown RBP2.12□□□□□ -2.07
NUP88-202ENST00000570937 HIST1H4AP62805 103 aaKnown RBP2.12□□□□□ -2.07
NUP88-202ENST00000570937 DEFB116Q30KQ4 102 aa2.12□□□□□ -2.07
NUP88-202ENST00000570937 IGFL1Q6UW32 110 aa2.12□□□□□ -2.07
NUP88-202ENST00000570937 DEFB105AQ8NG35 78 aa2.12□□□□□ -2.07
NUP88-202ENST00000570937 TNXBP22105 4242 aa2.11□□□□□ -2.07
NUP88-202ENST00000570937 F8WEM9 126 aa2.11□□□□□ -2.07
NUP88-202ENST00000570937 H3BT86 120 aa2.11□□□□□ -2.07
NUP88-202ENST00000570937 SPRR1BP22528 89 aa2.11□□□□□ -2.07
NUP88-202ENST00000570937 FP248Q71RG6 208 aaPredicted RBP2.11□□□□□ -2.07
NUP88-202ENST00000570937 ST20-AS1Q8NBB2 130 aa2.11□□□□□ -2.07
NUP88-202ENST00000570937 SMIM11BQ8TCY0 68 aa2.11□□□□□ -2.07
NUP88-202ENST00000570937 IGLV5-48A0A075B6I7 105 aa2.1□□□□□ -2.07
NUP88-202ENST00000570937 hADV29S1A0JD25 119 aa2.1□□□□□ -2.07
NUP88-202ENST00000570937 H0YGX0 51 aa2.1□□□□□ -2.07
NUP88-202ENST00000570937 LINC00575Q6W349 94 aa2.1□□□□□ -2.07
NUP88-202ENST00000570937 LIMD2Q9BT23 127 aa2.1□□□□□ -2.07
NUP88-202ENST00000570937 PRO1854Q9UHT4 67 aa2.1□□□□□ -2.07
NUP88-202ENST00000570937 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 LRP2P98164 4655 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 A0A0B4J2C4 111 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 H7C2G1 150 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 NDUFS5O43920 106 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 TCL1BO95988 128 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 COX6CP09669 75 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 TPRXLQ17RH7 258 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.09□□□□□ -2.07
NUP88-202ENST00000570937 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 LINC00643Q86TS7 51 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 SERP2Q8N6R1 65 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 RETNLBQ9BQ08 111 aa2.09□□□□□ -2.07
NUP88-202ENST00000570937 H3BQ85 93 aa2.08□□□□□ -2.08
NUP88-202ENST00000570937 NDUFC1O43677 76 aa2.08□□□□□ -2.08
NUP88-202ENST00000570937 PSMB2P49721 201 aa2.08□□□□□ -2.08
NUP88-202ENST00000570937 Q6JHZ5 121 aa2.08□□□□□ -2.08
NUP88-202ENST00000570937 Q6ZQY7 126 aa2.08□□□□□ -2.08
NUP88-202ENST00000570937 BRK1Q8WUW1 75 aa2.08□□□□□ -2.08
NUP88-202ENST00000570937 DNAL4O96015 105 aa2.07□□□□□ -2.08
NUP88-202ENST00000570937 FXYD2P54710 66 aa2.07□□□□□ -2.08
NUP88-202ENST00000570937 DSCR8Q96T75 97 aa2.07□□□□□ -2.08
NUP88-202ENST00000570937 RBM12B-AS1Q9P1G2 102 aa2.07□□□□□ -2.08
NUP88-202ENST00000570937 C8orf87E5RJ46 101 aa2.06□□□□□ -2.08
NUP88-202ENST00000570937 CLEC2BQ92478 149 aa2.06□□□□□ -2.08
NUP88-202ENST00000570937 TMEM256-PLSCR3K7ERE1 68 aa2.05□□□□□ -2.08
NUP88-202ENST00000570937 KLKP1Q107X0 134 aa2.04□□□□□ -2.08
NUP88-202ENST00000570937 ATXN8Q156A1 80 aa2.04□□□□□ -2.08
NUP88-202ENST00000570937 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms