RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 MOBPQ13875 183 aa3.19□□□□□ -1.9
SF3B3-213ENST00000569687 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
SF3B3-213ENST00000569687 ASB16-AS1Q495Z4 193 aa3.19□□□□□ -1.9
SF3B3-213ENST00000569687 FAM229BQ4G0N7 80 aa3.19□□□□□ -1.9
SF3B3-213ENST00000569687 ZCCHC13Q8WW36 166 aaKnown RBP3.18□□□□□ -1.9
SF3B3-213ENST00000569687 ANAPC11Q9NYG5 84 aa3.18□□□□□ -1.9
SF3B3-213ENST00000569687 SNURFQ9Y675 71 aa3.18□□□□□ -1.9
SF3B3-213ENST00000569687 A0A1B0GVY2 172 aa3.17□□□□□ -1.9
SF3B3-213ENST00000569687 ATP5EP56381 51 aaPredicted RBP3.17□□□□□ -1.9
SF3B3-213ENST00000569687 Q5XG85 94 aa3.17□□□□□ -1.9
SF3B3-213ENST00000569687 CASC2Q6XLA1 102 aa3.17□□□□□ -1.9
SF3B3-213ENST00000569687 APOBP04114 4563 aaKnown RBP3.17□□□□□ -1.9
SF3B3-213ENST00000569687 VPS13BQ7Z7G8 4022 aa3.16□□□□□ -1.9
SF3B3-213ENST00000569687 MMP24-AS1A0A0U1RRL7 71 aa3.16□□□□□ -1.9
SF3B3-213ENST00000569687 FAM236DA0A1B0GTK5 79 aa3.16□□□□□ -1.9
SF3B3-213ENST00000569687 H3BPC8 53 aa3.16□□□□□ -1.9
SF3B3-213ENST00000569687 FAM236CP0DP71 79 aa3.16□□□□□ -1.9
SF3B3-213ENST00000569687 A0A1B0GVX0 72 aa3.15□□□□□ -1.91
SF3B3-213ENST00000569687 WFDC13Q8IUB5 93 aa3.15□□□□□ -1.91
SF3B3-213ENST00000569687 TP53AIP1Q9HCN2 124 aa3.15□□□□□ -1.91
SF3B3-213ENST00000569687 SERP1Q9Y6X1 66 aa3.15□□□□□ -1.91
SF3B3-213ENST00000569687 hDV103S1A0JD37 113 aa3.14□□□□□ -1.91
SF3B3-213ENST00000569687 KRTAP1-4P0C5Y4 121 aa3.14□□□□□ -1.91
SF3B3-213ENST00000569687 MP68P56378 58 aa3.14□□□□□ -1.91
SF3B3-213ENST00000569687 HRCT1Q6UXD1 115 aa3.14□□□□□ -1.91
SF3B3-213ENST00000569687 C8orf17Q9NRJ1 99 aa3.14□□□□□ -1.91
SF3B3-213ENST00000569687 SEC61GP60059 68 aa3.13□□□□□ -1.91
SF3B3-213ENST00000569687 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
SF3B3-213ENST00000569687 KRTAP13-2Q52LG2 175 aa3.13□□□□□ -1.91
SF3B3-213ENST00000569687 SPINK6Q6UWN8 80 aa3.13□□□□□ -1.91
SF3B3-213ENST00000569687 OXTP01178 125 aa3.12□□□□□ -1.91
SF3B3-213ENST00000569687 PKHD1L1Q86WI1 4243 aa3.11□□□□□ -1.91
SF3B3-213ENST00000569687 A0A087X002 238 aa3.11□□□□□ -1.91
SF3B3-213ENST00000569687 C8orf87E5RJ46 101 aa3.11□□□□□ -1.91
SF3B3-213ENST00000569687 H0Y9P7 68 aa3.11□□□□□ -1.91
SF3B3-213ENST00000569687 MRPL34Q9BQ48 92 aaKnown RBP3.11□□□□□ -1.91
SF3B3-213ENST00000569687 CYP4F30PQ9H0H9 118 aa3.11□□□□□ -1.91
SF3B3-213ENST00000569687 HSPG2P98160 4391 aa3.1□□□□□ -1.91
SF3B3-213ENST00000569687 SMIM26A0A096LP01 95 aa3.1□□□□□ -1.91
SF3B3-213ENST00000569687 IGHV6-1A0A0B4J1U7 121 aa3.1□□□□□ -1.91
SF3B3-213ENST00000569687 TRAV22A0A0B4J277 110 aa3.1□□□□□ -1.91
SF3B3-213ENST00000569687 C1orf195Q5TG92 126 aa3.1□□□□□ -1.91
SF3B3-213ENST00000569687 NOTCH2NLQ7Z3S9 236 aa3.1□□□□□ -1.91
SF3B3-213ENST00000569687 SPANXA2-OT1Q8N9U9 137 aa3.1□□□□□ -1.91
SF3B3-213ENST00000569687 C1orf64Q8NEQ6 169 aa3.1□□□□□ -1.91
SF3B3-213ENST00000569687 LINC00208Q96KT6 92 aa3.1□□□□□ -1.91
SF3B3-213ENST00000569687 RYR1P21817 5038 aa3.09□□□□□ -1.91
SF3B3-213ENST00000569687 EPPK1P58107 5090 aaKnown RBP3.09□□□□□ -1.91
SF3B3-213ENST00000569687 SPINK1P00995 79 aa3.09□□□□□ -1.91
SF3B3-213ENST00000569687 RPS29P62273 56 aaKnown RBP3.09□□□□□ -1.91
SF3B3-213ENST00000569687 LIMD2Q9BT23 127 aa3.09□□□□□ -1.91
SF3B3-213ENST00000569687 KRTAP10-4P60372 401 aaPredicted RBP3.08□□□□□ -1.92
SF3B3-213ENST00000569687 SPAG11AQ6PDA7 123 aa3.08□□□□□ -1.92
SF3B3-213ENST00000569687 PRAC1Q96KF2 57 aa3.08□□□□□ -1.92
SF3B3-213ENST00000569687 FAT1Q14517 4588 aa3.08□□□□□ -1.92
SF3B3-213ENST00000569687 IGLV7-46A0A075B6I9 117 aa3.07□□□□□ -1.92
SF3B3-213ENST00000569687 LINC00313P59037 77 aa3.07□□□□□ -1.92
SF3B3-213ENST00000569687 KRTAP13-3Q3SY46 172 aa3.07□□□□□ -1.92
SF3B3-213ENST00000569687 Q8N9P0 234 aaPredicted RBP3.07□□□□□ -1.92
SF3B3-213ENST00000569687 TYMSOSQ8TAI1 123 aa3.07□□□□□ -1.92
SF3B3-213ENST00000569687 KRTAP16-1A8MUX0 517 aa3.05□□□□□ -1.92
SF3B3-213ENST00000569687 SMR3BP02814 79 aaPredicted RBP3.05□□□□□ -1.92
SF3B3-213ENST00000569687 Q5W150 140 aa3.05□□□□□ -1.92
SF3B3-213ENST00000569687 FP248Q71RG6 208 aaPredicted RBP3.05□□□□□ -1.92
SF3B3-213ENST00000569687 LOC101927531A0A1B0GV80 90 aa3.04□□□□□ -1.92
SF3B3-213ENST00000569687 NDUFS5O43920 106 aa3.04□□□□□ -1.92
SF3B3-213ENST00000569687 LINC00304Q8N9R0 145 aa3.04□□□□□ -1.92
SF3B3-213ENST00000569687 KRTAP9-6A0A140TA67 174 aa3.03□□□□□ -1.92
SF3B3-213ENST00000569687 KRTAP9-7A8MTY7 169 aa3.03□□□□□ -1.92
SF3B3-213ENST00000569687 C4orf26Q17RF5 130 aa3.02□□□□□ -1.93
SF3B3-213ENST00000569687 Q1T7F1 81 aa3.02□□□□□ -1.93
SF3B3-213ENST00000569687 KRTAP19-1Q8IUB9 90 aa3.02□□□□□ -1.93
SF3B3-213ENST00000569687 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
SF3B3-213ENST00000569687 FAT3Q8TDW7 4589 aa3□□□□□ -1.93
SF3B3-213ENST00000569687 TNXBP22105 4242 aa3□□□□□ -1.93
SF3B3-213ENST00000569687 PRR4Q16378 134 aa3□□□□□ -1.93
SF3B3-213ENST00000569687 LCE4AQ5TA78 99 aa3□□□□□ -1.93
SF3B3-213ENST00000569687 Q5VSD8 79 aa3□□□□□ -1.93
SF3B3-213ENST00000569687 BIRC6Q9NR09 4857 aa3□□□□□ -1.93
SF3B3-213ENST00000569687 IGKV2-30P06310 120 aa2.99□□□□□ -1.93
SF3B3-213ENST00000569687 KRTAP10-8P60410 259 aa2.99□□□□□ -1.93
SF3B3-213ENST00000569687 PCOTHQ58A44 107 aa2.99□□□□□ -1.93
SF3B3-213ENST00000569687 V9GYY9 64 aa2.99□□□□□ -1.93
SF3B3-213ENST00000569687 KRTAP17-1Q9BYP8 105 aa2.98□□□□□ -1.93
SF3B3-213ENST00000569687 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
SF3B3-213ENST00000569687 COA5Q86WW8 74 aa2.97□□□□□ -1.93
SF3B3-213ENST00000569687 A8MUU9 505 aa2.96□□□□□ -1.94
SF3B3-213ENST00000569687 HRES1P13985 223 aa2.96□□□□□ -1.94
SF3B3-213ENST00000569687 ACYP2P14621 99 aa2.96□□□□□ -1.94
SF3B3-213ENST00000569687 C20orf166-AS1Q96NR2 134 aa2.96□□□□□ -1.94
SF3B3-213ENST00000569687 LRP1Q07954 4544 aaKnown RBP2.96□□□□□ -1.94
SF3B3-213ENST00000569687 HERC2O95714 4834 aa2.96□□□□□ -1.94
SF3B3-213ENST00000569687 DMAC1Q96GE9 116 aa2.95□□□□□ -1.94
SF3B3-213ENST00000569687 MYCBP2O75592 4640 aa2.94□□□□□ -1.94
SF3B3-213ENST00000569687 LOC100996750A0A140TA64 210 aa2.94□□□□□ -1.94
SF3B3-213ENST00000569687 KRTAP4-6Q9BYQ5 205 aa2.94□□□□□ -1.94
SF3B3-213ENST00000569687 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
SF3B3-213ENST00000569687 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
SF3B3-213ENST00000569687 LINC01558Q9Y6Z2 57 aa2.93□□□□□ -1.94
SF3B3-213ENST00000569687 ABCA13Q86UQ4 5058 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms