RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 C1orf195Q5TG92 126 aa5.08□□□□□ -1.6
CAPN3-219ENST00000569136 IGFL1Q6UW32 110 aa5.08□□□□□ -1.6
CAPN3-219ENST00000569136 FAM218AQ96MZ4 157 aa5.08□□□□□ -1.6
CAPN3-219ENST00000569136 A0A0G2JQZ4 141 aa5.07□□□□□ -1.6
CAPN3-219ENST00000569136 TRBV7-7A0A0K0K1E9 115 aa5.07□□□□□ -1.6
CAPN3-219ENST00000569136 DNAL4O96015 105 aa5.07□□□□□ -1.6
CAPN3-219ENST00000569136 SCGB1C2P0DMR2 95 aa5.07□□□□□ -1.6
CAPN3-219ENST00000569136 H3BMG7 143 aa5.06□□□□□ -1.6
CAPN3-219ENST00000569136 TMEM256-PLSCR3K7ERE1 68 aa5.06□□□□□ -1.6
CAPN3-219ENST00000569136 Q6Q795 121 aa5.06□□□□□ -1.6
CAPN3-219ENST00000569136 ORMDL1Q9P0S3 153 aa5.06□□□□□ -1.6
CAPN3-219ENST00000569136 K7ERJ3 54 aa5.05□□□□□ -1.6
CAPN3-219ENST00000569136 TEN1Q86WV5 123 aa5.05□□□□□ -1.6
CAPN3-219ENST00000569136 SS18L2Q9UHA2 77 aa5.04□□□□□ -1.6
CAPN3-219ENST00000569136 MUC2Q02817 5179 aa5.04□□□□□ -1.6
CAPN3-219ENST00000569136 LST1O00453 97 aa5.03□□□□□ -1.6
CAPN3-219ENST00000569136 TRACP01848 142 aa5.03□□□□□ -1.6
CAPN3-219ENST00000569136 LYRM7Q5U5X0 104 aa5.02□□□□□ -1.61
CAPN3-219ENST00000569136 ANKRD29Q8N6D5 301 aa5.02□□□□□ -1.61
CAPN3-219ENST00000569136 C9orf92A6NGG3 77 aa5□□□□□ -1.61
CAPN3-219ENST00000569136 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
CAPN3-219ENST00000569136 TRBV7-4A0A0J9YYF1 115 aa4.98□□□□□ -1.61
CAPN3-219ENST00000569136 BAALC-AS2P0C853 105 aa4.98□□□□□ -1.61
CAPN3-219ENST00000569136 PRO0461Q9UI25 63 aa4.98□□□□□ -1.61
CAPN3-219ENST00000569136 A0A087WSZ3 146 aa4.97□□□□□ -1.61
CAPN3-219ENST00000569136 RBM3P98179 157 aaKnown RBP4.97□□□□□ -1.61
CAPN3-219ENST00000569136 ATXN8Q156A1 80 aa4.97□□□□□ -1.61
CAPN3-219ENST00000569136 TRBV20-1A0A075B6N2 111 aa4.96□□□□□ -1.62
CAPN3-219ENST00000569136 A0A1W2PNM2 257 aa4.96□□□□□ -1.62
CAPN3-219ENST00000569136 ETDBQ3ZM63 59 aa4.96□□□□□ -1.62
CAPN3-219ENST00000569136 NAA38Q9BRA0 125 aaKnown RBP4.96□□□□□ -1.62
CAPN3-219ENST00000569136 PCOTHQ58A44 107 aa4.95□□□□□ -1.62
CAPN3-219ENST00000569136 DSCR8Q96T75 97 aa4.95□□□□□ -1.62
CAPN3-219ENST00000569136 CCKP06307 115 aa4.94□□□□□ -1.62
CAPN3-219ENST00000569136 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
CAPN3-219ENST00000569136 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
CAPN3-219ENST00000569136 C9JAW5 83 aa4.93□□□□□ -1.62
CAPN3-219ENST00000569136 JMJD7-PLA2G4BH0Y9G9 81 aa4.93□□□□□ -1.62
CAPN3-219ENST00000569136 OBSCN-AS1Q96MR7 158 aa4.93□□□□□ -1.62
CAPN3-219ENST00000569136 ANAPC13Q9BS18 74 aa4.93□□□□□ -1.62
CAPN3-219ENST00000569136 A0A1B0GW54 56 aa4.92□□□□□ -1.62
CAPN3-219ENST00000569136 PDE6GP18545 87 aa4.92□□□□□ -1.62
CAPN3-219ENST00000569136 ATP11AUNQ6ZP68 121 aa4.91□□□□□ -1.62
CAPN3-219ENST00000569136 KRTAP4-1Q9BYQ7 146 aa4.91□□□□□ -1.62
CAPN3-219ENST00000569136 Q96NJ1 140 aa4.9□□□□□ -1.63
CAPN3-219ENST00000569136 LINC00472Q9H8W2 130 aa4.9□□□□□ -1.63
CAPN3-219ENST00000569136 MT-ATP8P03928 68 aa4.89□□□□□ -1.63
CAPN3-219ENST00000569136 IGKV4-1P06312 121 aa4.89□□□□□ -1.63
CAPN3-219ENST00000569136 LINC00313P59037 77 aa4.89□□□□□ -1.63
CAPN3-219ENST00000569136 LOC110117498A0A087WWA1 95 aa4.87□□□□□ -1.63
CAPN3-219ENST00000569136 J3KT08 172 aa4.87□□□□□ -1.63
CAPN3-219ENST00000569136 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
CAPN3-219ENST00000569136 Q6ZQT0 140 aa4.86□□□□□ -1.63
CAPN3-219ENST00000569136 C20orf166-AS1Q96NR2 134 aa4.86□□□□□ -1.63
CAPN3-219ENST00000569136 A8MUU9 505 aa4.85□□□□□ -1.63
CAPN3-219ENST00000569136 NOTCH2NLQ7Z3S9 236 aa4.85□□□□□ -1.63
CAPN3-219ENST00000569136 FAM240AA0A1B0GVK7 77 aa4.84□□□□□ -1.63
CAPN3-219ENST00000569136 C8orf87E5RJ46 101 aa4.83□□□□□ -1.64
CAPN3-219ENST00000569136 H3BT86 120 aa4.83□□□□□ -1.64
CAPN3-219ENST00000569136 NDUFB1O75438 58 aa4.83□□□□□ -1.64
CAPN3-219ENST00000569136 DSCR10P59022 87 aa4.83□□□□□ -1.64
CAPN3-219ENST00000569136 DEFB116Q30KQ4 102 aa4.83□□□□□ -1.64
CAPN3-219ENST00000569136 IGHV6-1A0A0B4J1U7 121 aa4.82□□□□□ -1.64
CAPN3-219ENST00000569136 IMUPQ9GZP8 106 aa4.82□□□□□ -1.64
CAPN3-219ENST00000569136 ACYP1P07311 99 aa4.81□□□□□ -1.64
CAPN3-219ENST00000569136 C14orf132Q9NPU4 83 aa4.81□□□□□ -1.64
CAPN3-219ENST00000569136 A0A1B0GVX0 72 aa4.8□□□□□ -1.64
CAPN3-219ENST00000569136 NREPQ16612 68 aa4.8□□□□□ -1.64
CAPN3-219ENST00000569136 SMIM20Q8N5G0 67 aa4.8□□□□□ -1.64
CAPN3-219ENST00000569136 KRTAP10-6P60371 365 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-219ENST00000569136 A8MWP4 228 aa4.78□□□□□ -1.64
CAPN3-219ENST00000569136 CCDC179H3BU77 68 aa4.78□□□□□ -1.64
CAPN3-219ENST00000569136 KRTAP19-2Q3LHN2 52 aa4.78□□□□□ -1.64
CAPN3-219ENST00000569136 COX6B2Q6YFQ2 88 aa4.78□□□□□ -1.64
CAPN3-219ENST00000569136 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
CAPN3-219ENST00000569136 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
CAPN3-219ENST00000569136 C5orf47Q569G3 176 aa4.76□□□□□ -1.65
CAPN3-219ENST00000569136 UQCRQO14949 82 aa4.75□□□□□ -1.65
CAPN3-219ENST00000569136 PRR15Q8IV56 129 aa4.74□□□□□ -1.65
CAPN3-219ENST00000569136 IGKV3D-7A0A0C4DH55 119 aa4.73□□□□□ -1.65
CAPN3-219ENST00000569136 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
CAPN3-219ENST00000569136 MT1HP80294 61 aa4.73□□□□□ -1.65
CAPN3-219ENST00000569136 LINC00643Q86TS7 51 aa4.73□□□□□ -1.65
CAPN3-219ENST00000569136 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
CAPN3-219ENST00000569136 C8orf17Q9NRJ1 99 aa4.72□□□□□ -1.65
CAPN3-219ENST00000569136 M0R2T5 61 aa4.71□□□□□ -1.66
CAPN3-219ENST00000569136 BPY2O14599 106 aa4.71□□□□□ -1.66
CAPN3-219ENST00000569136 Q6ZVQ6 151 aa4.71□□□□□ -1.66
CAPN3-219ENST00000569136 ATOX1O00244 68 aa4.7□□□□□ -1.66
CAPN3-219ENST00000569136 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
CAPN3-219ENST00000569136 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
CAPN3-219ENST00000569136 RBM12B-AS1Q9P1G2 102 aa4.69□□□□□ -1.66
CAPN3-219ENST00000569136 FAM236AA0A1B0GUQ0 79 aa4.68□□□□□ -1.66
CAPN3-219ENST00000569136 FAM236BA0A1B0GV22 79 aa4.68□□□□□ -1.66
CAPN3-219ENST00000569136 COX7CP15954 63 aa4.68□□□□□ -1.66
CAPN3-219ENST00000569136 TMEM254Q8TBM7 123 aa4.68□□□□□ -1.66
CAPN3-219ENST00000569136 TMEM258P61165 79 aa4.67□□□□□ -1.66
CAPN3-219ENST00000569136 UBL5Q9BZL1 73 aa4.67□□□□□ -1.66
CAPN3-219ENST00000569136 hDV103S1A0JD37 113 aa4.66□□□□□ -1.66
CAPN3-219ENST00000569136 HIST1H4AP62805 103 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms