RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 A0A1B0GVX0 72 aa5.36□□□□□ -1.55
HDGFL3-206ENST00000568294 Q96NJ1 140 aa5.36□□□□□ -1.55
HDGFL3-206ENST00000568294 MEGF8Q7Z7M0 2845 aa5.36□□□□□ -1.55
HDGFL3-206ENST00000568294 KMT2AQ03164 3969 aa5.36□□□□□ -1.55
HDGFL3-206ENST00000568294 WWC2-AS2Q96NR7 200 aa5.35□□□□□ -1.55
HDGFL3-206ENST00000568294 MRPL34Q9BQ48 92 aaKnown RBP5.35□□□□□ -1.55
HDGFL3-206ENST00000568294 KRTAP13-1Q8IUC0 172 aa5.35□□□□□ -1.55
HDGFL3-206ENST00000568294 ZNF861PO60384 105 aa5.33□□□□□ -1.56
HDGFL3-206ENST00000568294 Q5W150 140 aa5.33□□□□□ -1.56
HDGFL3-206ENST00000568294 ZNF706Q9Y5V0 76 aaPredicted RBP5.33□□□□□ -1.56
HDGFL3-206ENST00000568294 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
HDGFL3-206ENST00000568294 LIMD2Q9BT23 127 aa5.32□□□□□ -1.56
HDGFL3-206ENST00000568294 IGLV7-46A0A075B6I9 117 aa5.31□□□□□ -1.56
HDGFL3-206ENST00000568294 H3BPC8 53 aa5.31□□□□□ -1.56
HDGFL3-206ENST00000568294 HRES1P13985 223 aa5.3□□□□□ -1.56
HDGFL3-206ENST00000568294 C1orf134Q5TEV5 83 aa5.3□□□□□ -1.56
HDGFL3-206ENST00000568294 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
HDGFL3-206ENST00000568294 LCA10Q71F78 164 aa5.29□□□□□ -1.56
HDGFL3-206ENST00000568294 TP53AIP1Q9HCN2 124 aa5.29□□□□□ -1.56
HDGFL3-206ENST00000568294 PRKDCP78527 4128 aaKnown RBP5.29□□□□□ -1.56
HDGFL3-206ENST00000568294 SPINK7P58062 85 aa5.29□□□□□ -1.56
HDGFL3-206ENST00000568294 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
HDGFL3-206ENST00000568294 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
HDGFL3-206ENST00000568294 IGLV7-43P04211 117 aa5.27□□□□□ -1.57
HDGFL3-206ENST00000568294 KRTAP10-2P60368 255 aa5.27□□□□□ -1.57
HDGFL3-206ENST00000568294 SPINK1P00995 79 aa5.27□□□□□ -1.57
HDGFL3-206ENST00000568294 DNAH17Q9UFH2 4485 aa5.27□□□□□ -1.57
HDGFL3-206ENST00000568294 LOC101927531A0A1B0GV80 90 aa5.26□□□□□ -1.57
HDGFL3-206ENST00000568294 DNAH2Q9P225 4427 aa5.26□□□□□ -1.57
HDGFL3-206ENST00000568294 KRTAP3-3Q9BYR6 98 aa5.25□□□□□ -1.57
HDGFL3-206ENST00000568294 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
HDGFL3-206ENST00000568294 DNHD1Q96M86 4753 aa5.25□□□□□ -1.57
HDGFL3-206ENST00000568294 LINC00483Q53H64 154 aa5.25□□□□□ -1.57
HDGFL3-206ENST00000568294 DNAH11Q96DT5 4516 aa5.24□□□□□ -1.57
HDGFL3-206ENST00000568294 Q6ZR54 194 aa5.24□□□□□ -1.57
HDGFL3-206ENST00000568294 PLAC8Q9NZF1 115 aa5.24□□□□□ -1.57
HDGFL3-206ENST00000568294 VPS13DQ5THJ4 4388 aa5.23□□□□□ -1.57
HDGFL3-206ENST00000568294 HECTD4Q9Y4D8 3996 aa5.23□□□□□ -1.57
HDGFL3-206ENST00000568294 DNAH6Q9C0G6 4158 aa5.23□□□□□ -1.57
HDGFL3-206ENST00000568294 LINC00313P59037 77 aa5.22□□□□□ -1.57
HDGFL3-206ENST00000568294 Q75L30 129 aa5.22□□□□□ -1.57
HDGFL3-206ENST00000568294 ASB16-AS1Q495Z4 193 aa5.19□□□□□ -1.58
HDGFL3-206ENST00000568294 LINC01558Q9Y6Z2 57 aa5.18□□□□□ -1.58
HDGFL3-206ENST00000568294 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
HDGFL3-206ENST00000568294 KRTAP10-1P60331 282 aa5.18□□□□□ -1.58
HDGFL3-206ENST00000568294 ACYP2P14621 99 aa5.17□□□□□ -1.58
HDGFL3-206ENST00000568294 PRAC1Q96KF2 57 aa5.17□□□□□ -1.58
HDGFL3-206ENST00000568294 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
HDGFL3-206ENST00000568294 SMR3BP02814 79 aaPredicted RBP5.17□□□□□ -1.58
HDGFL3-206ENST00000568294 KRTAP13-2Q52LG2 175 aa5.17□□□□□ -1.58
HDGFL3-206ENST00000568294 Q8N1X5 172 aa5.17□□□□□ -1.58
HDGFL3-206ENST00000568294 A0A1B0GU69 56 aa5.16□□□□□ -1.58
HDGFL3-206ENST00000568294 C7orf65Q6ZTY9 151 aa5.16□□□□□ -1.58
HDGFL3-206ENST00000568294 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
HDGFL3-206ENST00000568294 LRP1BQ9NZR2 4599 aa5.15□□□□□ -1.58
HDGFL3-206ENST00000568294 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
HDGFL3-206ENST00000568294 C8orf87E5RJ46 101 aa5.14□□□□□ -1.59
HDGFL3-206ENST00000568294 C9orf92A6NGG3 77 aa5.13□□□□□ -1.59
HDGFL3-206ENST00000568294 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
HDGFL3-206ENST00000568294 SSBP3-AS1Q7Z2R9 100 aa5.13□□□□□ -1.59
HDGFL3-206ENST00000568294 RBM12B-AS1Q9P1G2 102 aa5.13□□□□□ -1.59
HDGFL3-206ENST00000568294 DYNC2H1Q8NCM8 4307 aaKnown RBP5.13□□□□□ -1.59
HDGFL3-206ENST00000568294 TYMSOSQ8TAI1 123 aa5.12□□□□□ -1.59
HDGFL3-206ENST00000568294 DNAH5Q8TE73 4624 aa5.12□□□□□ -1.59
HDGFL3-206ENST00000568294 HYDINQ4G0P3 5121 aa5.12□□□□□ -1.59
HDGFL3-206ENST00000568294 A6NN06 94 aa5.1□□□□□ -1.59
HDGFL3-206ENST00000568294 ALMS1Q8TCU4 4167 aa5.1□□□□□ -1.59
HDGFL3-206ENST00000568294 KRTAP13-3Q3SY46 172 aa5.09□□□□□ -1.59
HDGFL3-206ENST00000568294 KRTAP21-3Q3LHN1 58 aa5.08□□□□□ -1.6
HDGFL3-206ENST00000568294 DMAC1Q96GE9 116 aa5.07□□□□□ -1.6
HDGFL3-206ENST00000568294 MIR22HGQ0VDD5 57 aa5.04□□□□□ -1.6
HDGFL3-206ENST00000568294 FLG2Q5D862 2391 aaPredicted RBP5.04□□□□□ -1.6
HDGFL3-206ENST00000568294 VPS13BQ7Z7G8 4022 aa5.03□□□□□ -1.6
HDGFL3-206ENST00000568294 KRTAP1-4P0C5Y4 121 aa5.03□□□□□ -1.6
HDGFL3-206ENST00000568294 DMBT1Q9UGM3 2413 aaPredicted RBP5.02□□□□□ -1.61
HDGFL3-206ENST00000568294 FAT2Q9NYQ8 4349 aa5.01□□□□□ -1.61
HDGFL3-206ENST00000568294 KRTAP16-1A8MUX0 517 aa5.01□□□□□ -1.61
HDGFL3-206ENST00000568294 FAT1Q14517 4588 aa5.01□□□□□ -1.61
HDGFL3-206ENST00000568294 LINC00304Q8N9R0 145 aa5.01□□□□□ -1.61
HDGFL3-206ENST00000568294 UQCR11O14957 56 aa5□□□□□ -1.61
HDGFL3-206ENST00000568294 PKHD1P08F94 4074 aa4.98□□□□□ -1.61
HDGFL3-206ENST00000568294 Q6ZSA8 131 aa4.95□□□□□ -1.62
HDGFL3-206ENST00000568294 CRIPTQ9P021 101 aa4.94□□□□□ -1.62
HDGFL3-206ENST00000568294 SEC61BP60468 96 aaKnown RBP4.93□□□□□ -1.62
HDGFL3-206ENST00000568294 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
HDGFL3-206ENST00000568294 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
HDGFL3-206ENST00000568294 PKD1P98161 4303 aa4.89□□□□□ -1.63
HDGFL3-206ENST00000568294 DYNC1H1Q14204 4646 aaKnown RBP4.89□□□□□ -1.63
HDGFL3-206ENST00000568294 MYCBP2O75592 4640 aa4.86□□□□□ -1.63
HDGFL3-206ENST00000568294 A0A0D9SG42 100 aa4.84□□□□□ -1.63
HDGFL3-206ENST00000568294 A0A1B0GU33 70 aa4.83□□□□□ -1.64
HDGFL3-206ENST00000568294 H0YAA0 97 aa4.83□□□□□ -1.64
HDGFL3-206ENST00000568294 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
HDGFL3-206ENST00000568294 SACSQ9NZJ4 4579 aa4.81□□□□□ -1.64
HDGFL3-206ENST00000568294 LRP1Q07954 4544 aaKnown RBP4.81□□□□□ -1.64
HDGFL3-206ENST00000568294 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
HDGFL3-206ENST00000568294 H1FX-AS1Q4G0G2 97 aa4.76□□□□□ -1.65
HDGFL3-206ENST00000568294 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
HDGFL3-206ENST00000568294 A8MUU9 505 aa4.75□□□□□ -1.65
HDGFL3-206ENST00000568294 C20orf166-AS1Q96NR2 134 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 227.2 ms