RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 STATHP02808 62 aa0.5□□□□□ -2.33
SHCBP1-206ENST00000567698 SPTA1P02549 2419 aa0.5□□□□□ -2.33
SHCBP1-206ENST00000567698 DSPP15924 2871 aaKnown RBP0.5□□□□□ -2.33
SHCBP1-206ENST00000567698 PRRC2CQ9Y520 2896 aaKnown RBP0.5□□□□□ -2.33
SHCBP1-206ENST00000567698 TENM4Q6N022 2769 aa0.5□□□□□ -2.33
SHCBP1-206ENST00000567698 SYNE1Q8NF91 8797 aaKnown RBP0.5□□□□□ -2.33
SHCBP1-206ENST00000567698 PIEZO1Q92508 2521 aa0.49□□□□□ -2.33
SHCBP1-206ENST00000567698 MYCBP2O75592 4640 aa0.49□□□□□ -2.33
SHCBP1-206ENST00000567698 DEFB136Q30KP8 78 aa0.49□□□□□ -2.33
SHCBP1-206ENST00000567698 DEFB133Q30KQ1 61 aa0.49□□□□□ -2.33
SHCBP1-206ENST00000567698 KRTAP8-1Q8IUC2 63 aa0.49□□□□□ -2.33
SHCBP1-206ENST00000567698 DEFB108BQ8NET1 73 aa0.49□□□□□ -2.33
SHCBP1-206ENST00000567698 ZFYVE26Q68DK2 2539 aa0.49□□□□□ -2.33
SHCBP1-206ENST00000567698 FAT2Q9NYQ8 4349 aa0.49□□□□□ -2.33
SHCBP1-206ENST00000567698 USP24Q9UPU5 2620 aa0.49□□□□□ -2.33
SHCBP1-206ENST00000567698 NIPBLQ6KC79 2804 aaeCLIP0.48□□□□□ -2.33
SHCBP1-206ENST00000567698 AKAP6Q13023 2319 aa0.48□□□□□ -2.33
SHCBP1-206ENST00000567698 SETD2Q9BYW2 2564 aaPredicted RBP0.48□□□□□ -2.33
SHCBP1-206ENST00000567698 DEFB1P60022 68 aa0.48□□□□□ -2.33
SHCBP1-206ENST00000567698 DEFB110Q30KQ9 67 aa0.48□□□□□ -2.33
SHCBP1-206ENST00000567698 U3KQA8 63 aa0.48□□□□□ -2.33
SHCBP1-206ENST00000567698 OTOGQ6ZRI0 2925 aa0.48□□□□□ -2.33
SHCBP1-206ENST00000567698 HIVEP3Q5T1R4 2406 aa0.48□□□□□ -2.33
SHCBP1-206ENST00000567698 SPTBN1Q01082 2364 aaKnown RBP0.48□□□□□ -2.33
SHCBP1-206ENST00000567698 TNXBP22105 4242 aa0.48□□□□□ -2.33
SHCBP1-206ENST00000567698 NSD1Q96L73 2696 aaPredicted RBP0.47□□□□□ -2.33
SHCBP1-206ENST00000567698 A0A096LPF7 62 aa0.47□□□□□ -2.33
SHCBP1-206ENST00000567698 CEP290O15078 2479 aa0.47□□□□□ -2.33
SHCBP1-206ENST00000567698 GVINP1Q7Z2Y8 2422 aa0.47□□□□□ -2.33
SHCBP1-206ENST00000567698 DNAH11Q96DT5 4516 aa0.46□□□□□ -2.34
SHCBP1-206ENST00000567698 CACNA1AO00555 2505 aa0.46□□□□□ -2.34
SHCBP1-206ENST00000567698 EP300Q09472 2414 aaPredicted RBP0.46□□□□□ -2.34
SHCBP1-206ENST00000567698 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
SHCBP1-206ENST00000567698 EPG5Q9HCE0 2579 aa0.46□□□□□ -2.34
SHCBP1-206ENST00000567698 A0A096LNI7 61 aa0.46□□□□□ -2.34
SHCBP1-206ENST00000567698 PKD1L2Q7Z442 2459 aa0.46□□□□□ -2.34
SHCBP1-206ENST00000567698 APC2O95996 2303 aa0.46□□□□□ -2.34
SHCBP1-206ENST00000567698 PKDREJQ9NTG1 2253 aa0.45□□□□□ -2.34
SHCBP1-206ENST00000567698 MAP1BP46821 2468 aaKnown RBP0.45□□□□□ -2.34
SHCBP1-206ENST00000567698 UBR5O95071 2799 aaPredicted RBP0.45□□□□□ -2.34
SHCBP1-206ENST00000567698 CRYBG3Q68DQ2 2970 aa0.45□□□□□ -2.34
SHCBP1-206ENST00000567698 ANKHD1Q8IWZ3 2542 aaKnown RBP0.45□□□□□ -2.34
SHCBP1-206ENST00000567698 VPS13DQ5THJ4 4388 aa0.45□□□□□ -2.34
SHCBP1-206ENST00000567698 USP9YO00507 2555 aaPredicted RBP0.45□□□□□ -2.34
SHCBP1-206ENST00000567698 CHD6Q8TD26 2715 aa0.44□□□□□ -2.34
SHCBP1-206ENST00000567698 PTPN13Q12923 2485 aa0.44□□□□□ -2.34
SHCBP1-206ENST00000567698 NAV2Q8IVL1 2488 aa0.44□□□□□ -2.34
SHCBP1-206ENST00000567698 DNAH3Q8TD57 4116 aa0.44□□□□□ -2.34
SHCBP1-206ENST00000567698 NCOR1O75376 2440 aa0.44□□□□□ -2.34
SHCBP1-206ENST00000567698 CEP250Q9BV73 2442 aa0.44□□□□□ -2.34
SHCBP1-206ENST00000567698 FLNCQ14315 2725 aa0.44□□□□□ -2.34
SHCBP1-206ENST00000567698 ITPR3Q14573 2671 aa0.43□□□□□ -2.34
SHCBP1-206ENST00000567698 SACSQ9NZJ4 4579 aa0.43□□□□□ -2.34
SHCBP1-206ENST00000567698 UTP20O75691 2785 aaKnown RBP0.43□□□□□ -2.34
SHCBP1-206ENST00000567698 PRM1P04553 51 aa0.43□□□□□ -2.34
SHCBP1-206ENST00000567698 SPRR2BP35325 72 aa0.43□□□□□ -2.34
SHCBP1-206ENST00000567698 SPRR2AP35326 72 aa0.43□□□□□ -2.34
SHCBP1-206ENST00000567698 ANKRD11Q6UB99 2663 aaPredicted RBP0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 LAMA5O15230 3695 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 AKAP9Q99996 3911 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 ACACAQ13085 2346 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 CSPG4Q6UVK1 2322 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 DNAH8Q96JB1 4490 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 MT1AP04731 61 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 ANK3Q12955 4377 aaKnown RBP0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 LRRK2Q5S007 2527 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 ITPR1Q14643 2758 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 ATRQ13535 2644 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 UNC79Q9P2D8 2635 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 HUWE1Q7Z6Z7 4374 aaKnown RBP0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 CMYA5Q8N3K9 4069 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 SPTBN4Q9H254 2564 aa0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 MAP1AP78559 2803 aaPredicted RBP0.42□□□□□ -2.34
SHCBP1-206ENST00000567698 SRRM2Q9UQ35 2752 aaKnown RBP0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 FAM186AA6NE01 2351 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 DNAH9Q9NYC9 4486 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 VPS13BQ7Z7G8 4022 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 KMT2AQ03164 3969 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 COL12A1Q99715 3063 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 DNAH17Q9UFH2 4485 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 ACANP16112 2415 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 SPRR2DP22532 72 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 SETXQ7Z333 2677 aaKnown RBP0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 DYNC2H1Q8NCM8 4307 aaKnown RBP0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 TENM2Q9NT68 2774 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 LPAP08519 4548 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 PKHD1L1Q86WI1 4243 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 SRCAPQ6ZRS2 3230 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 NBPF19A0A087WUL8 3843 aa0.41□□□□□ -2.34
SHCBP1-206ENST00000567698 TNRC18O15417 2968 aaPredicted RBP0.4□□□□□ -2.34
SHCBP1-206ENST00000567698 DNAH2Q9P225 4427 aa0.4□□□□□ -2.35
SHCBP1-206ENST00000567698 MDN1Q9NU22 5596 aa0.4□□□□□ -2.35
SHCBP1-206ENST00000567698 RANBP2P49792 3224 aaKnown RBP0.4□□□□□ -2.35
SHCBP1-206ENST00000567698 COL6A5A8TX70 2615 aa0.4□□□□□ -2.35
SHCBP1-206ENST00000567698 NBASA2RRP1 2371 aa0.4□□□□□ -2.35
SHCBP1-206ENST00000567698 RIF1Q5UIP0 2472 aaKnown RBP0.4□□□□□ -2.35
SHCBP1-206ENST00000567698 CCDC168Q8NDH2 2452 aa0.4□□□□□ -2.35
SHCBP1-206ENST00000567698 CELSR1Q9NYQ6 3014 aa0.4□□□□□ -2.35
SHCBP1-206ENST00000567698 MTORP42345 2549 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms