RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 C8orf17Q9NRJ1 99 aa10.58□□□□□ -0.72
CMTM3-214ENST00000567572 A0A1B0GVX0 72 aa10.56□□□□□ -0.72
CMTM3-214ENST00000567572 Q1T7F1 81 aa10.56□□□□□ -0.72
CMTM3-214ENST00000567572 CDK2AP2O75956 126 aa10.55□□□□□ -0.72
CMTM3-214ENST00000567572 IGLV7-43P04211 117 aa10.54□□□□□ -0.72
CMTM3-214ENST00000567572 MPLKIPQ8TAP9 179 aa10.54□□□□□ -0.72
CMTM3-214ENST00000567572 CD164Q04900 197 aa10.53□□□□□ -0.72
CMTM3-214ENST00000567572 MRPL34Q9BQ48 92 aaKnown RBP10.48□□□□□ -0.73
CMTM3-214ENST00000567572 IGHV6-1A0A0B4J1U7 121 aa10.47□□□□□ -0.73
CMTM3-214ENST00000567572 PRR4Q16378 134 aa10.47□□□□□ -0.73
CMTM3-214ENST00000567572 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
CMTM3-214ENST00000567572 IGLV7-46A0A075B6I9 117 aa10.45□□□□□ -0.74
CMTM3-214ENST00000567572 LRP1BQ9NZR2 4599 aa10.45□□□□□ -0.74
CMTM3-214ENST00000567572 ANAPC11Q9NYG5 84 aa10.45□□□□□ -0.74
CMTM3-214ENST00000567572 BRK1Q8WUW1 75 aa10.44□□□□□ -0.74
CMTM3-214ENST00000567572 PKHD1P08F94 4074 aa10.43□□□□□ -0.74
CMTM3-214ENST00000567572 RYR2Q92736 4967 aa10.41□□□□□ -0.74
CMTM3-214ENST00000567572 A0A1B0GVY2 172 aa10.41□□□□□ -0.74
CMTM3-214ENST00000567572 C8orf87E5RJ46 101 aa10.39□□□□□ -0.75
CMTM3-214ENST00000567572 NDUFS5O43920 106 aa10.39□□□□□ -0.75
CMTM3-214ENST00000567572 KMT2CQ8NEZ4 4911 aaKnown RBP10.35□□□□□ -0.75
CMTM3-214ENST00000567572 LOC101927531A0A1B0GV80 90 aa10.35□□□□□ -0.75
CMTM3-214ENST00000567572 LIMD2Q9BT23 127 aa10.34□□□□□ -0.75
CMTM3-214ENST00000567572 PMAIP1Q13794 54 aa10.32□□□□□ -0.76
CMTM3-214ENST00000567572 DYNC1H1Q14204 4646 aaKnown RBP10.31□□□□□ -0.76
CMTM3-214ENST00000567572 A0A087X002 238 aa10.31□□□□□ -0.76
CMTM3-214ENST00000567572 NOTCH2NLQ7Z3S9 236 aa10.31□□□□□ -0.76
CMTM3-214ENST00000567572 COA5Q86WW8 74 aa10.31□□□□□ -0.76
CMTM3-214ENST00000567572 VPS13BQ7Z7G8 4022 aa10.31□□□□□ -0.76
CMTM3-214ENST00000567572 PCOTHQ58A44 107 aa10.3□□□□□ -0.76
CMTM3-214ENST00000567572 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
CMTM3-214ENST00000567572 Q8N9P0 234 aaPredicted RBP10.29□□□□□ -0.76
CMTM3-214ENST00000567572 KRTAP13-3Q3SY46 172 aa10.28□□□□□ -0.76
CMTM3-214ENST00000567572 PSPHP1O15172 72 aa10.26□□□□□ -0.77
CMTM3-214ENST00000567572 KRTAP1-4P0C5Y4 121 aa10.25□□□□□ -0.77
CMTM3-214ENST00000567572 KRTAP13-2Q52LG2 175 aa10.23□□□□□ -0.77
CMTM3-214ENST00000567572 A8MUN3 132 aa10.23□□□□□ -0.77
CMTM3-214ENST00000567572 LINC00313P59037 77 aa10.21□□□□□ -0.78
CMTM3-214ENST00000567572 Q5VV11 94 aa10.21□□□□□ -0.78
CMTM3-214ENST00000567572 APOBP04114 4563 aaKnown RBP10.21□□□□□ -0.78
CMTM3-214ENST00000567572 FAM229AH3BQW9 127 aa10.19□□□□□ -0.78
CMTM3-214ENST00000567572 Q5W150 140 aa10.19□□□□□ -0.78
CMTM3-214ENST00000567572 SMR3BP02814 79 aaPredicted RBP10.16□□□□□ -0.78
CMTM3-214ENST00000567572 Q75L30 129 aa10.15□□□□□ -0.78
CMTM3-214ENST00000567572 HRES1P13985 223 aa10.15□□□□□ -0.79
CMTM3-214ENST00000567572 PRR15LQ9BU68 103 aa10.15□□□□□ -0.79
CMTM3-214ENST00000567572 LINC01558Q9Y6Z2 57 aa10.14□□□□□ -0.79
CMTM3-214ENST00000567572 PLA2G1BP04054 148 aaKnown RBP10.13□□□□□ -0.79
CMTM3-214ENST00000567572 KRTAP10-4P60372 401 aaPredicted RBP10.13□□□□□ -0.79
CMTM3-214ENST00000567572 CHKB-CPT1BH3BT56 60 aa10.09□□□□□ -0.79
CMTM3-214ENST00000567572 RYR3Q15413 4870 aa10.09□□□□□ -0.79
CMTM3-214ENST00000567572 KRTAP16-1A8MUX0 517 aa10.08□□□□□ -0.8
CMTM3-214ENST00000567572 ACYP2P14621 99 aa10.07□□□□□ -0.8
CMTM3-214ENST00000567572 SPINK1P00995 79 aa10.07□□□□□ -0.8
CMTM3-214ENST00000567572 FAT1Q14517 4588 aa10.07□□□□□ -0.8
CMTM3-214ENST00000567572 IGKV2-30P06310 120 aa10.06□□□□□ -0.8
CMTM3-214ENST00000567572 C4orf48Q5BLP8 95 aa10.06□□□□□ -0.8
CMTM3-214ENST00000567572 DMAC1Q96GE9 116 aa10.06□□□□□ -0.8
CMTM3-214ENST00000567572 TYMSOSQ8TAI1 123 aa10.05□□□□□ -0.8
CMTM3-214ENST00000567572 RPS29P62273 56 aaKnown RBP10.05□□□□□ -0.8
CMTM3-214ENST00000567572 SPAG11AQ6PDA7 123 aa10.03□□□□□ -0.8
CMTM3-214ENST00000567572 PRR26Q8N8Z3 221 aa10.01□□□□□ -0.81
CMTM3-214ENST00000567572 A6NED7 52 aa9.97□□□□□ -0.81
CMTM3-214ENST00000567572 KTN1-AS1Q86SY8 53 aa9.94□□□□□ -0.82
CMTM3-214ENST00000567572 LINC00304Q8N9R0 145 aa9.94□□□□□ -0.82
CMTM3-214ENST00000567572 CDC42SE1Q9NRR8 79 aa9.94□□□□□ -0.82
CMTM3-214ENST00000567572 PKHD1L1Q86WI1 4243 aa9.92□□□□□ -0.82
CMTM3-214ENST00000567572 ATP11AUNQ6ZP68 121 aa9.92□□□□□ -0.82
CMTM3-214ENST00000567572 HSPG2P98160 4391 aa9.91□□□□□ -0.82
CMTM3-214ENST00000567572 LCA10Q71F78 164 aa9.9□□□□□ -0.83
CMTM3-214ENST00000567572 RETNLBQ9BQ08 111 aa9.88□□□□□ -0.83
CMTM3-214ENST00000567572 RBM12B-AS1Q9P1G2 102 aa9.88□□□□□ -0.83
CMTM3-214ENST00000567572 Q5VSD8 79 aa9.86□□□□□ -0.83
CMTM3-214ENST00000567572 A8MU10 97 aa9.85□□□□□ -0.83
CMTM3-214ENST00000567572 RYR1P21817 5038 aa9.84□□□□□ -0.83
CMTM3-214ENST00000567572 IGKV2D-30A0A075B6S6 120 aa9.84□□□□□ -0.83
CMTM3-214ENST00000567572 C7orf65Q6ZTY9 151 aa9.8□□□□□ -0.84
CMTM3-214ENST00000567572 SPINK7P58062 85 aa9.79□□□□□ -0.84
CMTM3-214ENST00000567572 KRTAP17-1Q9BYP8 105 aa9.77□□□□□ -0.85
CMTM3-214ENST00000567572 SPTSSBQ8NFR3 76 aa9.76□□□□□ -0.85
CMTM3-214ENST00000567572 A0A1B0GU69 56 aa9.74□□□□□ -0.85
CMTM3-214ENST00000567572 A6NN06 94 aa9.72□□□□□ -0.85
CMTM3-214ENST00000567572 KIAA1109Q2LD37 5005 aa9.71□□□□□ -0.85
CMTM3-214ENST00000567572 C20orf166-AS1Q96NR2 134 aa9.71□□□□□ -0.86
CMTM3-214ENST00000567572 A8MUU9 505 aa9.7□□□□□ -0.86
CMTM3-214ENST00000567572 KRTAP10-8P60410 259 aa9.7□□□□□ -0.86
CMTM3-214ENST00000567572 EPPK1P58107 5090 aaKnown RBP9.7□□□□□ -0.86
CMTM3-214ENST00000567572 LRP1Q07954 4544 aaKnown RBP9.69□□□□□ -0.86
CMTM3-214ENST00000567572 TNXBP22105 4242 aa9.68□□□□□ -0.86
CMTM3-214ENST00000567572 Q8N1X5 172 aa9.68□□□□□ -0.86
CMTM3-214ENST00000567572 FLG2Q5D862 2391 aaPredicted RBP9.65□□□□□ -0.87
CMTM3-214ENST00000567572 FAT3Q8TDW7 4589 aa9.62□□□□□ -0.87
CMTM3-214ENST00000567572 SPATA8Q6RVD6 105 aa9.6□□□□□ -0.87
CMTM3-214ENST00000567572 UQCR11O14957 56 aa9.6□□□□□ -0.87
CMTM3-214ENST00000567572 C9orf92A6NGG3 77 aa9.55□□□□□ -0.88
CMTM3-214ENST00000567572 MT1HL1P0DM35 61 aa9.54□□□□□ -0.88
CMTM3-214ENST00000567572 MYCBP2O75592 4640 aa9.53□□□□□ -0.88
CMTM3-214ENST00000567572 MIR22HGQ0VDD5 57 aa9.52□□□□□ -0.88
CMTM3-214ENST00000567572 KRTAP4-5Q9BYR2 181 aa9.42□□□□□ -0.9
CMTM3-214ENST00000567572 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms