RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 DEFB116Q30KQ4 102 aa6.6□□□□□ -1.35
RNF40-211ENST00000567365 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
RNF40-211ENST00000567365 SIGMAR1Q99720 223 aa6.6□□□□□ -1.35
RNF40-211ENST00000567365 A8MUU9 505 aa6.59□□□□□ -1.35
RNF40-211ENST00000567365 KRTAP16-1A8MUX0 517 aa6.59□□□□□ -1.35
RNF40-211ENST00000567365 DSCR10P59022 87 aa6.58□□□□□ -1.36
RNF40-211ENST00000567365 NOTCH2NLQ7Z3S9 236 aa6.58□□□□□ -1.36
RNF40-211ENST00000567365 KRTAP19-2Q3LHN2 52 aa6.56□□□□□ -1.36
RNF40-211ENST00000567365 J3KT08 172 aa6.54□□□□□ -1.36
RNF40-211ENST00000567365 LINC00313P59037 77 aa6.54□□□□□ -1.36
RNF40-211ENST00000567365 A0A1B0GVX0 72 aa6.53□□□□□ -1.36
RNF40-211ENST00000567365 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
RNF40-211ENST00000567365 IGHV6-1A0A0B4J1U7 121 aa6.51□□□□□ -1.37
RNF40-211ENST00000567365 C8orf87E5RJ46 101 aa6.51□□□□□ -1.37
RNF40-211ENST00000567365 GTF2H5Q6ZYL4 71 aa6.51□□□□□ -1.37
RNF40-211ENST00000567365 A8MWP4 228 aa6.5□□□□□ -1.37
RNF40-211ENST00000567365 IGKV3D-7A0A0C4DH55 119 aa6.49□□□□□ -1.37
RNF40-211ENST00000567365 NREPQ16612 68 aa6.48□□□□□ -1.37
RNF40-211ENST00000567365 ATP11AUNQ6ZP68 121 aa6.48□□□□□ -1.37
RNF40-211ENST00000567365 F8W1H4 67 aa6.47□□□□□ -1.37
RNF40-211ENST00000567365 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.38
RNF40-211ENST00000567365 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
RNF40-211ENST00000567365 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.38
RNF40-211ENST00000567365 NDUFB1O75438 58 aa6.45□□□□□ -1.38
RNF40-211ENST00000567365 C8orf17Q9NRJ1 99 aa6.45□□□□□ -1.38
RNF40-211ENST00000567365 Q6ZVQ6 151 aa6.44□□□□□ -1.38
RNF40-211ENST00000567365 Q8N9P0 234 aaPredicted RBP6.44□□□□□ -1.38
RNF40-211ENST00000567365 ETDBQ3ZM63 59 aa6.42□□□□□ -1.38
RNF40-211ENST00000567365 LINC00846Q9NV44 126 aa6.42□□□□□ -1.38
RNF40-211ENST00000567365 CRCT1Q9UGL9 99 aa6.42□□□□□ -1.38
RNF40-211ENST00000567365 MMP24-AS1A0A0U1RRL7 71 aa6.4□□□□□ -1.38
RNF40-211ENST00000567365 K7EQZ3 153 aa6.4□□□□□ -1.38
RNF40-211ENST00000567365 BPY2O14599 106 aa6.38□□□□□ -1.39
RNF40-211ENST00000567365 MT1HP80294 61 aa6.38□□□□□ -1.39
RNF40-211ENST00000567365 TMEM254Q8TBM7 123 aa6.36□□□□□ -1.39
RNF40-211ENST00000567365 ZCCHC13Q8WW36 166 aaKnown RBP6.36□□□□□ -1.39
RNF40-211ENST00000567365 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
RNF40-211ENST00000567365 Q8N9L7 120 aa6.34□□□□□ -1.39
RNF40-211ENST00000567365 MPLKIPQ8TAP9 179 aa6.34□□□□□ -1.39
RNF40-211ENST00000567365 MRPL34Q9BQ48 92 aaKnown RBP6.34□□□□□ -1.39
RNF40-211ENST00000567365 UBL5Q9BZL1 73 aa6.34□□□□□ -1.39
RNF40-211ENST00000567365 HRES1P13985 223 aa6.33□□□□□ -1.4
RNF40-211ENST00000567365 A0A1B0GV90 55 aa6.32□□□□□ -1.4
RNF40-211ENST00000567365 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
RNF40-211ENST00000567365 FAM240AA0A1B0GVK7 77 aa6.28□□□□□ -1.4
RNF40-211ENST00000567365 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
RNF40-211ENST00000567365 CXCL6P80162 114 aa6.27□□□□□ -1.41
RNF40-211ENST00000567365 ACYP1P07311 99 aa6.26□□□□□ -1.41
RNF40-211ENST00000567365 SPINK7P58062 85 aa6.26□□□□□ -1.41
RNF40-211ENST00000567365 CASC2Q6XLA1 102 aa6.26□□□□□ -1.41
RNF40-211ENST00000567365 WFDC13Q8IUB5 93 aa6.26□□□□□ -1.41
RNF40-211ENST00000567365 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
RNF40-211ENST00000567365 Q5W150 140 aa6.24□□□□□ -1.41
RNF40-211ENST00000567365 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
RNF40-211ENST00000567365 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
RNF40-211ENST00000567365 NDUFS5O43920 106 aa6.2□□□□□ -1.42
RNF40-211ENST00000567365 RBM12B-AS1Q9P1G2 102 aa6.18□□□□□ -1.42
RNF40-211ENST00000567365 ATP5EP2Q5VTU8 51 aa6.16□□□□□ -1.42
RNF40-211ENST00000567365 M0R2T5 61 aa6.15□□□□□ -1.42
RNF40-211ENST00000567365 FAM236DA0A1B0GTK5 79 aa6.14□□□□□ -1.43
RNF40-211ENST00000567365 FAM236CP0DP71 79 aa6.14□□□□□ -1.43
RNF40-211ENST00000567365 LINC00643Q86TS7 51 aa6.13□□□□□ -1.43
RNF40-211ENST00000567365 C7orf65Q6ZTY9 151 aa6.12□□□□□ -1.43
RNF40-211ENST00000567365 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
RNF40-211ENST00000567365 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
RNF40-211ENST00000567365 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
RNF40-211ENST00000567365 TP53AIP1Q9HCN2 124 aa6.1□□□□□ -1.43
RNF40-211ENST00000567365 J3QR89 54 aa6.05□□□□□ -1.44
RNF40-211ENST00000567365 HIST1H4AP62805 103 aaKnown RBP6.05□□□□□ -1.44
RNF40-211ENST00000567365 A0A087WVE0 104 aa6.04□□□□□ -1.44
RNF40-211ENST00000567365 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
RNF40-211ENST00000567365 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
RNF40-211ENST00000567365 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
RNF40-211ENST00000567365 MT2AP02795 61 aa6.01□□□□□ -1.45
RNF40-211ENST00000567365 C4orf26Q17RF5 130 aa6.01□□□□□ -1.45
RNF40-211ENST00000567365 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
RNF40-211ENST00000567365 TRAV22A0A0B4J277 110 aa5.99□□□□□ -1.45
RNF40-211ENST00000567365 CYP4F30PQ9H0H9 118 aa5.99□□□□□ -1.45
RNF40-211ENST00000567365 UQCRQO14949 82 aa5.98□□□□□ -1.45
RNF40-211ENST00000567365 OCR1Q9BZK8 76 aa5.97□□□□□ -1.45
RNF40-211ENST00000567365 MT1FP04733 61 aa5.96□□□□□ -1.46
RNF40-211ENST00000567365 LOC101927531A0A1B0GV80 90 aa5.94□□□□□ -1.46
RNF40-211ENST00000567365 K7ERU9 68 aa5.93□□□□□ -1.46
RNF40-211ENST00000567365 H0Y9P7 68 aa5.92□□□□□ -1.46
RNF40-211ENST00000567365 ATOX1O00244 68 aa5.91□□□□□ -1.46
RNF40-211ENST00000567365 C1orf64Q8NEQ6 169 aa5.91□□□□□ -1.46
RNF40-211ENST00000567365 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
RNF40-211ENST00000567365 IMUPQ9GZP8 106 aa5.9□□□□□ -1.46
RNF40-211ENST00000567365 MT-ATP8P03928 68 aa5.88□□□□□ -1.47
RNF40-211ENST00000567365 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
RNF40-211ENST00000567365 C5orf47Q569G3 176 aa5.84□□□□□ -1.47
RNF40-211ENST00000567365 LINC00208Q96KT6 92 aa5.84□□□□□ -1.47
RNF40-211ENST00000567365 SSPOA2VEC9 5147 aa5.84□□□□□ -1.47
RNF40-211ENST00000567365 LCE2BO14633 110 aa5.83□□□□□ -1.48
RNF40-211ENST00000567365 LCA10Q71F78 164 aa5.83□□□□□ -1.48
RNF40-211ENST00000567365 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
RNF40-211ENST00000567365 USH2AO75445 5202 aa5.82□□□□□ -1.48
RNF40-211ENST00000567365 S4R3F8 94 aa5.82□□□□□ -1.48
RNF40-211ENST00000567365 MP68P56378 58 aa5.81□□□□□ -1.48
RNF40-211ENST00000567365 KLKP1Q107X0 134 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms