RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 STAB1Q9NY15 2570 aa2.55□□□□□ -2
LPCAT2-208ENST00000566915 BOD1L1Q8NFC6 3051 aa2.55□□□□□ -2
LPCAT2-208ENST00000566915 LOC400499M0QZD8 3231 aa2.54□□□□□ -2
LPCAT2-208ENST00000566915 SEC61BP60468 96 aaKnown RBP2.54□□□□□ -2
LPCAT2-208ENST00000566915 R4GN34 69 aa2.53□□□□□ -2
LPCAT2-208ENST00000566915 ITPR2Q14571 2701 aa2.53□□□□□ -2
LPCAT2-208ENST00000566915 XP32Q5T750 250 aa2.52□□□□□ -2.01
LPCAT2-208ENST00000566915 SVEP1Q4LDE5 3571 aa2.52□□□□□ -2.01
LPCAT2-208ENST00000566915 CSMD3Q7Z407 3707 aa2.52□□□□□ -2.01
LPCAT2-208ENST00000566915 KRTAP13-1Q8IUC0 172 aa2.52□□□□□ -2.01
LPCAT2-208ENST00000566915 NSD1Q96L73 2696 aaPredicted RBP2.52□□□□□ -2.01
LPCAT2-208ENST00000566915 ANK3Q12955 4377 aaKnown RBP2.51□□□□□ -2.01
LPCAT2-208ENST00000566915 TENM4Q6N022 2769 aa2.51□□□□□ -2.01
LPCAT2-208ENST00000566915 ANK2Q01484 3957 aa2.51□□□□□ -2.01
LPCAT2-208ENST00000566915 PANO1I0J062 215 aa2.51□□□□□ -2.01
LPCAT2-208ENST00000566915 MGAQ8IWI9 3026 aa2.51□□□□□ -2.01
LPCAT2-208ENST00000566915 KRTAP25-1Q3LHN0 102 aa2.51□□□□□ -2.01
LPCAT2-208ENST00000566915 FLNCQ14315 2725 aa2.5□□□□□ -2.01
LPCAT2-208ENST00000566915 APCP25054 2843 aa2.5□□□□□ -2.01
LPCAT2-208ENST00000566915 KRTAP10-1P60331 282 aa2.5□□□□□ -2.01
LPCAT2-208ENST00000566915 CMYA5Q8N3K9 4069 aa2.5□□□□□ -2.01
LPCAT2-208ENST00000566915 A0A0C4DFX4 3053 aa2.5□□□□□ -2.01
LPCAT2-208ENST00000566915 M0QZ58 72 aa2.5□□□□□ -2.01
LPCAT2-208ENST00000566915 CENPEQ02224 2701 aa2.49□□□□□ -2.01
LPCAT2-208ENST00000566915 Q6ZRN7 208 aaPredicted RBP2.49□□□□□ -2.01
LPCAT2-208ENST00000566915 NOTCH2NLQ7Z3S9 236 aa2.49□□□□□ -2.01
LPCAT2-208ENST00000566915 DMXL1Q9Y485 3027 aa2.49□□□□□ -2.01
LPCAT2-208ENST00000566915 CSMD2Q7Z408 3487 aa2.49□□□□□ -2.01
LPCAT2-208ENST00000566915 KRTAP10-2P60368 255 aa2.49□□□□□ -2.01
LPCAT2-208ENST00000566915 KRTAP7-1Q8IUC3 87 aa2.48□□□□□ -2.01
LPCAT2-208ENST00000566915 ITPR1Q14643 2758 aa2.48□□□□□ -2.01
LPCAT2-208ENST00000566915 KALRNO60229 2985 aa2.48□□□□□ -2.01
LPCAT2-208ENST00000566915 TEX15Q9BXT5 2789 aa2.46□□□□□ -2.02
LPCAT2-208ENST00000566915 NBEAL1Q6ZS30 2694 aa2.46□□□□□ -2.02
LPCAT2-208ENST00000566915 KRTAP16-1A8MUX0 517 aa2.45□□□□□ -2.02
LPCAT2-208ENST00000566915 ADM2Q7Z4H4 148 aa2.44□□□□□ -2.02
LPCAT2-208ENST00000566915 KRTAP11-1Q8IUC1 163 aa2.44□□□□□ -2.02
LPCAT2-208ENST00000566915 A8MUU9 505 aa2.44□□□□□ -2.02
LPCAT2-208ENST00000566915 UTP20O75691 2785 aaKnown RBP2.44□□□□□ -2.02
LPCAT2-208ENST00000566915 C20orf166-AS1Q96NR2 134 aa2.43□□□□□ -2.02
LPCAT2-208ENST00000566915 DMBT1Q9UGM3 2413 aaPredicted RBP2.43□□□□□ -2.02
LPCAT2-208ENST00000566915 A0A1B0GVY2 172 aa2.43□□□□□ -2.02
LPCAT2-208ENST00000566915 DNAH3Q8TD57 4116 aa2.43□□□□□ -2.02
LPCAT2-208ENST00000566915 PDZD2O15018 2839 aa2.43□□□□□ -2.02
LPCAT2-208ENST00000566915 KRTAP13-2Q52LG2 175 aa2.42□□□□□ -2.02
LPCAT2-208ENST00000566915 LYSTQ99698 3801 aa2.42□□□□□ -2.02
LPCAT2-208ENST00000566915 LOC100996750A0A140TA64 210 aa2.42□□□□□ -2.02
LPCAT2-208ENST00000566915 KRTAP4-6Q9BYQ5 205 aa2.42□□□□□ -2.02
LPCAT2-208ENST00000566915 MAP1AP78559 2803 aaPredicted RBP2.41□□□□□ -2.02
LPCAT2-208ENST00000566915 FLG2Q5D862 2391 aaPredicted RBP2.41□□□□□ -2.02
LPCAT2-208ENST00000566915 M0R2T5 61 aa2.41□□□□□ -2.02
LPCAT2-208ENST00000566915 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
LPCAT2-208ENST00000566915 PLAC4Q8WY50 150 aa2.41□□□□□ -2.02
LPCAT2-208ENST00000566915 DMXL2Q8TDJ6 3036 aa2.41□□□□□ -2.02
LPCAT2-208ENST00000566915 ATMQ13315 3056 aa2.41□□□□□ -2.02
LPCAT2-208ENST00000566915 DCHS2Q6V1P9 2916 aa2.4□□□□□ -2.03
LPCAT2-208ENST00000566915 DNAH1Q9P2D7 4330 aa2.4□□□□□ -2.03
LPCAT2-208ENST00000566915 TRRAPQ9Y4A5 3859 aa2.39□□□□□ -2.03
LPCAT2-208ENST00000566915 NOTCH1P46531 2555 aa2.39□□□□□ -2.03
LPCAT2-208ENST00000566915 A8MU10 97 aa2.38□□□□□ -2.03
LPCAT2-208ENST00000566915 NBEAQ8NFP9 2946 aa2.36□□□□□ -2.03
LPCAT2-208ENST00000566915 FBN3Q75N90 2809 aa2.36□□□□□ -2.03
LPCAT2-208ENST00000566915 TNP1P09430 55 aa2.35□□□□□ -2.03
LPCAT2-208ENST00000566915 NDUFAF8A1L188 74 aa2.35□□□□□ -2.03
LPCAT2-208ENST00000566915 OTOGQ6ZRI0 2925 aa2.35□□□□□ -2.03
LPCAT2-208ENST00000566915 NBEAL2Q6ZNJ1 2754 aa2.34□□□□□ -2.03
LPCAT2-208ENST00000566915 STAB2Q8WWQ8 2551 aa2.34□□□□□ -2.03
LPCAT2-208ENST00000566915 FBN2P35556 2912 aa2.34□□□□□ -2.03
LPCAT2-208ENST00000566915 KRTAP1-4P0C5Y4 121 aa2.33□□□□□ -2.04
LPCAT2-208ENST00000566915 COL12A1Q99715 3063 aa2.33□□□□□ -2.04
LPCAT2-208ENST00000566915 CELSR1Q9NYQ6 3014 aa2.33□□□□□ -2.04
LPCAT2-208ENST00000566915 H0YAA0 97 aa2.32□□□□□ -2.04
LPCAT2-208ENST00000566915 KRTAP13-3Q3SY46 172 aa2.31□□□□□ -2.04
LPCAT2-208ENST00000566915 DNAH7Q8WXX0 4024 aa2.31□□□□□ -2.04
LPCAT2-208ENST00000566915 MXRA5Q9NR99 2828 aa2.31□□□□□ -2.04
LPCAT2-208ENST00000566915 ZZEF1O43149 2961 aa2.3□□□□□ -2.04
LPCAT2-208ENST00000566915 P0C880 135 aa2.3□□□□□ -2.04
LPCAT2-208ENST00000566915 NIPBLQ6KC79 2804 aaeCLIP2.29□□□□□ -2.04
LPCAT2-208ENST00000566915 HRNRQ86YZ3 2850 aaPredicted RBP2.29□□□□□ -2.04
LPCAT2-208ENST00000566915 ADGRG4Q8IZF6 3080 aa2.29□□□□□ -2.04
LPCAT2-208ENST00000566915 TPRXLQ17RH7 258 aa2.28□□□□□ -2.04
LPCAT2-208ENST00000566915 LRBAP50851 2863 aa2.28□□□□□ -2.04
LPCAT2-208ENST00000566915 CELSR2Q9HCU4 2923 aa2.27□□□□□ -2.05
LPCAT2-208ENST00000566915 CRYBG3Q68DQ2 2970 aa2.26□□□□□ -2.05
LPCAT2-208ENST00000566915 ALMS1Q8TCU4 4167 aa2.26□□□□□ -2.05
LPCAT2-208ENST00000566915 KRTAP10-8P60410 259 aa2.25□□□□□ -2.05
LPCAT2-208ENST00000566915 HECTD4Q9Y4D8 3996 aa2.25□□□□□ -2.05
LPCAT2-208ENST00000566915 PRKDCP78527 4128 aaKnown RBP2.25□□□□□ -2.05
LPCAT2-208ENST00000566915 DYNC2H1Q8NCM8 4307 aaKnown RBP2.24□□□□□ -2.05
LPCAT2-208ENST00000566915 C10orf95Q9H7T3 257 aa2.24□□□□□ -2.05
LPCAT2-208ENST00000566915 FRAS1Q86XX4 4008 aa2.22□□□□□ -2.05
LPCAT2-208ENST00000566915 DNAH6Q9C0G6 4158 aa2.22□□□□□ -2.05
LPCAT2-208ENST00000566915 TACC2O95359 2948 aa2.21□□□□□ -2.06
LPCAT2-208ENST00000566915 NF1P21359 2839 aa2.21□□□□□ -2.06
LPCAT2-208ENST00000566915 TENM2Q9NT68 2774 aa2.2□□□□□ -2.06
LPCAT2-208ENST00000566915 ZANQ9Y493 2812 aa2.2□□□□□ -2.06
LPCAT2-208ENST00000566915 KRTAP4-5Q9BYR2 181 aa2.2□□□□□ -2.06
LPCAT2-208ENST00000566915 FBN1P35555 2871 aaKnown RBP2.19□□□□□ -2.06
LPCAT2-208ENST00000566915 PRO2289Q9P1D8 64 aa2.18□□□□□ -2.06
LPCAT2-208ENST00000566915 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms