RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 TRBV20-1A0A075B6N2 111 aa2.35□□□□□ -2.03
KARS-208ENST00000566772 C7orf77A4D0Y5 90 aa2.35□□□□□ -2.03
KARS-208ENST00000566772 LOC110117498A0A087WWA1 95 aa2.34□□□□□ -2.03
KARS-208ENST00000566772 INE1O15225 51 aa2.34□□□□□ -2.03
KARS-208ENST00000566772 NDUFA1O15239 70 aa2.34□□□□□ -2.03
KARS-208ENST00000566772 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
KARS-208ENST00000566772 Q6ZUT4 128 aa2.34□□□□□ -2.03
KARS-208ENST00000566772 C9orf62Q8N4C0 152 aa2.34□□□□□ -2.03
KARS-208ENST00000566772 LIMD2Q9BT23 127 aa2.34□□□□□ -2.03
KARS-208ENST00000566772 CDC42SE2Q9NRR3 84 aa2.34□□□□□ -2.03
KARS-208ENST00000566772 FSIP2Q5CZC0 6907 aa2.33□□□□□ -2.04
KARS-208ENST00000566772 IGKV3D-7A0A0C4DH55 119 aa2.33□□□□□ -2.04
KARS-208ENST00000566772 LINC00587B1AMM8 73 aa2.32□□□□□ -2.04
KARS-208ENST00000566772 ADCYAP1P18509 176 aa2.32□□□□□ -2.04
KARS-208ENST00000566772 CNFNQ9BYD5 112 aa2.32□□□□□ -2.04
KARS-208ENST00000566772 CYSTM1Q9H1C7 97 aa2.32□□□□□ -2.04
KARS-208ENST00000566772 MRPL35Q9NZE8 188 aaKnown RBP2.32□□□□□ -2.04
KARS-208ENST00000566772 C6orf48Q9UBA6 75 aa2.32□□□□□ -2.04
KARS-208ENST00000566772 UBE2D4Q9Y2X8 147 aa2.32□□□□□ -2.04
KARS-208ENST00000566772 A0A1B0GUT8 65 aa2.31□□□□□ -2.04
KARS-208ENST00000566772 HIGD1CA8MV81 97 aa2.31□□□□□ -2.04
KARS-208ENST00000566772 RPL39P62891 51 aaKnown RBP2.31□□□□□ -2.04
KARS-208ENST00000566772 TMEM191AQ9H0A3 160 aa2.31□□□□□ -2.04
KARS-208ENST00000566772 TOMM7Q9P0U1 55 aa2.31□□□□□ -2.04
KARS-208ENST00000566772 JMJD7-PLA2G4BH0Y9G9 81 aa2.3□□□□□ -2.04
KARS-208ENST00000566772 DLEU1O43261 78 aa2.3□□□□□ -2.04
KARS-208ENST00000566772 PPP1R17O96001 155 aa2.3□□□□□ -2.04
KARS-208ENST00000566772 POLR2KP53803 58 aaKnown RBP2.3□□□□□ -2.04
KARS-208ENST00000566772 OBSCN-AS1Q96MR7 158 aa2.3□□□□□ -2.04
KARS-208ENST00000566772 TRBV30A0A0K0K1B3 111 aa2.29□□□□□ -2.04
KARS-208ENST00000566772 IFI27P40305 119 aaPredicted RBP2.29□□□□□ -2.04
KARS-208ENST00000566772 ATP11AUNQ6ZP68 121 aa2.29□□□□□ -2.04
KARS-208ENST00000566772 ATOH7Q8N100 152 aa2.29□□□□□ -2.04
KARS-208ENST00000566772 D6R8Y8 96 aa2.28□□□□□ -2.04
KARS-208ENST00000566772 BCE1O60756 84 aa2.28□□□□□ -2.04
KARS-208ENST00000566772 CSAG1Q6PB30 78 aa2.28□□□□□ -2.04
KARS-208ENST00000566772 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
KARS-208ENST00000566772 C2orf88Q9BSF0 95 aa2.28□□□□□ -2.04
KARS-208ENST00000566772 SMIM2Q9BVW6 85 aa2.28□□□□□ -2.04
KARS-208ENST00000566772 C22orf24Q9Y442 160 aa2.28□□□□□ -2.04
KARS-208ENST00000566772 PRLHP81277 87 aa2.27□□□□□ -2.05
KARS-208ENST00000566772 MRPL54Q6P161 138 aaKnown RBP2.27□□□□□ -2.05
KARS-208ENST00000566772 TMEM141Q96I45 108 aa2.27□□□□□ -2.05
KARS-208ENST00000566772 C20orf78Q9BR46 151 aa2.27□□□□□ -2.05
KARS-208ENST00000566772 IGKCP01834 107 aa2.26□□□□□ -2.05
KARS-208ENST00000566772 ADIRFQ15847 76 aa2.26□□□□□ -2.05
KARS-208ENST00000566772 ALKAL2Q6UX46 152 aa2.26□□□□□ -2.05
KARS-208ENST00000566772 CRCT1Q9UGL9 99 aa2.26□□□□□ -2.05
KARS-208ENST00000566772 TRAV23DV6A0A075B6W5 121 aa2.25□□□□□ -2.05
KARS-208ENST00000566772 F8VRH5 84 aa2.25□□□□□ -2.05
KARS-208ENST00000566772 S100A8P05109 93 aa2.25□□□□□ -2.05
KARS-208ENST00000566772 Q8IZM0 81 aa2.25□□□□□ -2.05
KARS-208ENST00000566772 V9GYV3 84 aa2.25□□□□□ -2.05
KARS-208ENST00000566772 SMIM27A0A1W2PRY6 76 aa2.24□□□□□ -2.05
KARS-208ENST00000566772 COX7B2Q8TF08 81 aa2.23□□□□□ -2.05
KARS-208ENST00000566772 CDKN2A-AS1Q9UH64 79 aa2.23□□□□□ -2.05
KARS-208ENST00000566772 NDUFA12Q9UI09 145 aa2.23□□□□□ -2.05
KARS-208ENST00000566772 SPINK8P0C7L1 97 aa2.22□□□□□ -2.05
KARS-208ENST00000566772 SEC11AP67812 179 aa2.22□□□□□ -2.05
KARS-208ENST00000566772 M0R2T5 61 aa2.21□□□□□ -2.06
KARS-208ENST00000566772 PDE6GP18545 87 aa2.21□□□□□ -2.06
KARS-208ENST00000566772 SPAG11AQ6PDA7 123 aa2.21□□□□□ -2.06
KARS-208ENST00000566772 Q8N8P6 123 aa2.21□□□□□ -2.06
KARS-208ENST00000566772 AMELXQ99217 191 aa2.21□□□□□ -2.06
KARS-208ENST00000566772 KRTAP4-1Q9BYQ7 146 aa2.21□□□□□ -2.06
KARS-208ENST00000566772 OCIAD2Q56VL3 154 aa2.2□□□□□ -2.06
KARS-208ENST00000566772 MEIG1Q5JSS6 88 aa2.2□□□□□ -2.06
KARS-208ENST00000566772 LINC01545Q5VT33 79 aa2.2□□□□□ -2.06
KARS-208ENST00000566772 SPRR4Q96PI1 79 aa2.2□□□□□ -2.06
KARS-208ENST00000566772 MUC17Q685J3 4493 aa2.19□□□□□ -2.06
KARS-208ENST00000566772 IGIPA6NJ69 53 aa2.19□□□□□ -2.06
KARS-208ENST00000566772 SPINK1P00995 79 aa2.19□□□□□ -2.06
KARS-208ENST00000566772 PEA15Q15121 130 aa2.19□□□□□ -2.06
KARS-208ENST00000566772 SPATA45Q537H7 98 aa2.19□□□□□ -2.06
KARS-208ENST00000566772 NXT2Q9NPJ8 142 aaKnown RBP2.19□□□□□ -2.06
KARS-208ENST00000566772 ETDCA0A1B0GVM5 59 aa2.18□□□□□ -2.06
KARS-208ENST00000566772 K7EMI3 77 aa2.18□□□□□ -2.06
KARS-208ENST00000566772 NCR3O14931 201 aa2.18□□□□□ -2.06
KARS-208ENST00000566772 LINC00158P58513 81 aa2.18□□□□□ -2.06
KARS-208ENST00000566772 C9orf153Q5TBE3 101 aa2.18□□□□□ -2.06
KARS-208ENST00000566772 COX6B2Q6YFQ2 88 aa2.18□□□□□ -2.06
KARS-208ENST00000566772 PPDPFLQ8WWR9 84 aa2.18□□□□□ -2.06
KARS-208ENST00000566772 C9orf92A6NGG3 77 aa2.17□□□□□ -2.06
KARS-208ENST00000566772 MT1HP80294 61 aa2.17□□□□□ -2.06
KARS-208ENST00000566772 SMCO4Q9NRQ5 59 aa2.17□□□□□ -2.06
KARS-208ENST00000566772 CCDC179H3BU77 68 aa2.16□□□□□ -2.06
KARS-208ENST00000566772 COX17Q14061 63 aa2.16□□□□□ -2.06
KARS-208ENST00000566772 TMEM170BQ5T4T1 132 aa2.16□□□□□ -2.06
KARS-208ENST00000566772 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
KARS-208ENST00000566772 SEC11CQ9BY50 192 aa2.16□□□□□ -2.06
KARS-208ENST00000566772 TRBV10-3A0A0K0K1G6 114 aa2.14□□□□□ -2.07
KARS-208ENST00000566772 LINC01549A6NIU2 74 aa2.14□□□□□ -2.07
KARS-208ENST00000566772 SMIM13P0DJ93 91 aa2.14□□□□□ -2.07
KARS-208ENST00000566772 IGLC3P0DOY3 106 aa2.14□□□□□ -2.07
KARS-208ENST00000566772 PMCHL1Q16048 86 aa2.14□□□□□ -2.07
KARS-208ENST00000566772 SFTA2Q6UW10 78 aa2.14□□□□□ -2.07
KARS-208ENST00000566772 S100PP25815 95 aa2.13□□□□□ -2.07
KARS-208ENST00000566772 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
KARS-208ENST00000566772 RPS29P62273 56 aaKnown RBP2.13□□□□□ -2.07
KARS-208ENST00000566772 S100A7L2Q5SY68 101 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 419.5 ms