RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 DSCR10P59022 87 aa8.85□□□□□ -0.99
SCAMP2-208ENST00000566557 LCE2DQ5TA82 110 aaPredicted RBP8.84□□□□□ -0.99
SCAMP2-208ENST00000566557 IGHV6-1A0A0B4J1U7 121 aa8.82□□□□□ -1
SCAMP2-208ENST00000566557 F8W1H4 67 aa8.82□□□□□ -1
SCAMP2-208ENST00000566557 J3KT08 172 aa8.82□□□□□ -1
SCAMP2-208ENST00000566557 RPL37P61927 97 aaKnown RBP8.82□□□□□ -1
SCAMP2-208ENST00000566557 NREPQ16612 68 aa8.82□□□□□ -1
SCAMP2-208ENST00000566557 MUC17Q685J3 4493 aa8.82□□□□□ -1
SCAMP2-208ENST00000566557 PCOTHQ58A44 107 aa8.81□□□□□ -1
SCAMP2-208ENST00000566557 LINC00313P59037 77 aa8.79□□□□□ -1
SCAMP2-208ENST00000566557 A0A1B0GVX0 72 aa8.78□□□□□ -1
SCAMP2-208ENST00000566557 NDUFB1O75438 58 aa8.77□□□□□ -1.01
SCAMP2-208ENST00000566557 ETDBQ3ZM63 59 aa8.77□□□□□ -1.01
SCAMP2-208ENST00000566557 Q75L30 129 aa8.75□□□□□ -1.01
SCAMP2-208ENST00000566557 C8orf87E5RJ46 101 aa8.74□□□□□ -1.01
SCAMP2-208ENST00000566557 NOTCH2NLQ7Z3S9 236 aa8.74□□□□□ -1.01
SCAMP2-208ENST00000566557 A0A1B0GV90 55 aa8.73□□□□□ -1.01
SCAMP2-208ENST00000566557 A8MWP4 228 aa8.73□□□□□ -1.01
SCAMP2-208ENST00000566557 ATP11AUNQ6ZP68 121 aa8.72□□□□□ -1.01
SCAMP2-208ENST00000566557 KRTAP4-1Q9BYQ7 146 aa8.72□□□□□ -1.01
SCAMP2-208ENST00000566557 Q6ZVQ6 151 aa8.71□□□□□ -1.02
SCAMP2-208ENST00000566557 C20orf166-AS1Q96NR2 134 aa8.71□□□□□ -1.02
SCAMP2-208ENST00000566557 A8MUU9 505 aa8.7□□□□□ -1.02
SCAMP2-208ENST00000566557 BPY2O14599 106 aa8.7□□□□□ -1.02
SCAMP2-208ENST00000566557 IGKV3D-7A0A0C4DH55 119 aa8.69□□□□□ -1.02
SCAMP2-208ENST00000566557 KRTAP16-1A8MUX0 517 aa8.69□□□□□ -1.02
SCAMP2-208ENST00000566557 UBL5Q9BZL1 73 aa8.69□□□□□ -1.02
SCAMP2-208ENST00000566557 LINC00846Q9NV44 126 aa8.68□□□□□ -1.02
SCAMP2-208ENST00000566557 C8orf17Q9NRJ1 99 aa8.67□□□□□ -1.02
SCAMP2-208ENST00000566557 K7EQZ3 153 aa8.65□□□□□ -1.02
SCAMP2-208ENST00000566557 PRR15Q8IV56 129 aa8.65□□□□□ -1.02
SCAMP2-208ENST00000566557 Q8N9L7 120 aa8.6□□□□□ -1.03
SCAMP2-208ENST00000566557 MMP24-AS1A0A0U1RRL7 71 aa8.59□□□□□ -1.03
SCAMP2-208ENST00000566557 hDV103S1A0JD37 113 aa8.55□□□□□ -1.04
SCAMP2-208ENST00000566557 TMEM254Q8TBM7 123 aa8.55□□□□□ -1.04
SCAMP2-208ENST00000566557 MRPL34Q9BQ48 92 aaKnown RBP8.54□□□□□ -1.04
SCAMP2-208ENST00000566557 ACYP1P07311 99 aa8.53□□□□□ -1.04
SCAMP2-208ENST00000566557 WFDC13Q8IUB5 93 aa8.53□□□□□ -1.04
SCAMP2-208ENST00000566557 Q8N9P0 234 aaPredicted RBP8.53□□□□□ -1.04
SCAMP2-208ENST00000566557 NDUFS5O43920 106 aa8.52□□□□□ -1.05
SCAMP2-208ENST00000566557 ZCCHC13Q8WW36 166 aaKnown RBP8.51□□□□□ -1.05
SCAMP2-208ENST00000566557 FAM240AA0A1B0GVK7 77 aa8.5□□□□□ -1.05
SCAMP2-208ENST00000566557 CASC2Q6XLA1 102 aa8.5□□□□□ -1.05
SCAMP2-208ENST00000566557 CXCL6P80162 114 aa8.48□□□□□ -1.05
SCAMP2-208ENST00000566557 COX6B2Q6YFQ2 88 aa8.47□□□□□ -1.05
SCAMP2-208ENST00000566557 HCG22E2RYF7 251 aa8.45□□□□□ -1.06
SCAMP2-208ENST00000566557 KRTAP19-2Q3LHN2 52 aa8.42□□□□□ -1.06
SCAMP2-208ENST00000566557 ATP5EP2Q5VTU8 51 aa8.41□□□□□ -1.06
SCAMP2-208ENST00000566557 J3QR89 54 aa8.4□□□□□ -1.06
SCAMP2-208ENST00000566557 LCE2CQ5TA81 110 aa8.39□□□□□ -1.07
SCAMP2-208ENST00000566557 KRTAP9-7A8MTY7 169 aa8.38□□□□□ -1.07
SCAMP2-208ENST00000566557 SPINK7P58062 85 aa8.37□□□□□ -1.07
SCAMP2-208ENST00000566557 HIST1H4AP62805 103 aaKnown RBP8.36□□□□□ -1.07
SCAMP2-208ENST00000566557 FAM236DA0A1B0GTK5 79 aa8.35□□□□□ -1.07
SCAMP2-208ENST00000566557 FAM236CP0DP71 79 aa8.35□□□□□ -1.07
SCAMP2-208ENST00000566557 LINC00643Q86TS7 51 aa8.35□□□□□ -1.07
SCAMP2-208ENST00000566557 HRES1P13985 223 aa8.33□□□□□ -1.08
SCAMP2-208ENST00000566557 RBM12B-AS1Q9P1G2 102 aa8.33□□□□□ -1.08
SCAMP2-208ENST00000566557 MT1HP80294 61 aa8.32□□□□□ -1.08
SCAMP2-208ENST00000566557 Q5W150 140 aa8.31□□□□□ -1.08
SCAMP2-208ENST00000566557 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
SCAMP2-208ENST00000566557 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
SCAMP2-208ENST00000566557 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.29□□□□□ -1.08
SCAMP2-208ENST00000566557 M0R2T5 61 aa8.28□□□□□ -1.08
SCAMP2-208ENST00000566557 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
SCAMP2-208ENST00000566557 A0A087WVE0 104 aa8.26□□□□□ -1.09
SCAMP2-208ENST00000566557 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
SCAMP2-208ENST00000566557 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
SCAMP2-208ENST00000566557 MPLKIPQ8TAP9 179 aa8.25□□□□□ -1.09
SCAMP2-208ENST00000566557 TP53AIP1Q9HCN2 124 aa8.25□□□□□ -1.09
SCAMP2-208ENST00000566557 K7ERU9 68 aa8.22□□□□□ -1.09
SCAMP2-208ENST00000566557 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
SCAMP2-208ENST00000566557 FLGP20930 4061 aaPredicted RBP8.12□□□□□ -1.11
SCAMP2-208ENST00000566557 UQCRQO14949 82 aa8.11□□□□□ -1.11
SCAMP2-208ENST00000566557 SSPOA2VEC9 5147 aa8.1□□□□□ -1.11
SCAMP2-208ENST00000566557 H0Y9P7 68 aa8.09□□□□□ -1.11
SCAMP2-208ENST00000566557 C4orf26Q17RF5 130 aa8.09□□□□□ -1.11
SCAMP2-208ENST00000566557 USH2AO75445 5202 aa8.08□□□□□ -1.12
SCAMP2-208ENST00000566557 MT-ATP8P03928 68 aa8.07□□□□□ -1.12
SCAMP2-208ENST00000566557 LOC101927531A0A1B0GV80 90 aa8.05□□□□□ -1.12
SCAMP2-208ENST00000566557 SCGB1A1P11684 91 aa8.05□□□□□ -1.12
SCAMP2-208ENST00000566557 ATOX1O00244 68 aa8.04□□□□□ -1.12
SCAMP2-208ENST00000566557 H1FX-AS1Q4G0G2 97 aa8.03□□□□□ -1.12
SCAMP2-208ENST00000566557 OCR1Q9BZK8 76 aa8.02□□□□□ -1.13
SCAMP2-208ENST00000566557 IMUPQ9GZP8 106 aa8.02□□□□□ -1.13
SCAMP2-208ENST00000566557 CYP4F30PQ9H0H9 118 aa8.02□□□□□ -1.13
SCAMP2-208ENST00000566557 FCGBPQ9Y6R7 5405 aaPredicted RBP8□□□□□ -1.13
SCAMP2-208ENST00000566557 MP68P56378 58 aa7.99□□□□□ -1.13
SCAMP2-208ENST00000566557 C1orf64Q8NEQ6 169 aa7.98□□□□□ -1.13
SCAMP2-208ENST00000566557 LINC00208Q96KT6 92 aa7.98□□□□□ -1.13
SCAMP2-208ENST00000566557 FAM236AA0A1B0GUQ0 79 aa7.96□□□□□ -1.14
SCAMP2-208ENST00000566557 FAM236BA0A1B0GV22 79 aa7.96□□□□□ -1.14
SCAMP2-208ENST00000566557 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
SCAMP2-208ENST00000566557 SYNE2Q8WXH0 6885 aaKnown RBP7.9□□□□□ -1.14
SCAMP2-208ENST00000566557 KRTAP3-1Q9BYR8 98 aa7.9□□□□□ -1.14
SCAMP2-208ENST00000566557 S4R3F8 94 aa7.88□□□□□ -1.15
SCAMP2-208ENST00000566557 KRTAP9-8Q9BYQ0 159 aa7.87□□□□□ -1.15
SCAMP2-208ENST00000566557 H3BPC8 53 aa7.86□□□□□ -1.15
SCAMP2-208ENST00000566557 KLKP1Q107X0 134 aa7.86□□□□□ -1.15
SCAMP2-208ENST00000566557 SMIM20Q8N5G0 67 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms