RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 C1orf64Q8NEQ6 169 aa10.99□□□□□ -0.65
MSLN-207ENST00000566549 ASB16-AS1Q495Z4 193 aa10.97□□□□□ -0.65
MSLN-207ENST00000566549 VPS13BQ7Z7G8 4022 aa10.96□□□□□ -0.66
MSLN-207ENST00000566549 KRTAP21-3Q3LHN1 58 aa10.96□□□□□ -0.66
MSLN-207ENST00000566549 MPLKIPQ8TAP9 179 aa10.94□□□□□ -0.66
MSLN-207ENST00000566549 KRTAP13-2Q52LG2 175 aa10.94□□□□□ -0.66
MSLN-207ENST00000566549 C4orf48Q5BLP8 95 aa10.93□□□□□ -0.66
MSLN-207ENST00000566549 SSBP3-AS1Q7Z2R9 100 aa10.93□□□□□ -0.66
MSLN-207ENST00000566549 PKHD1P08F94 4074 aa10.92□□□□□ -0.66
MSLN-207ENST00000566549 SACSQ9NZJ4 4579 aa10.92□□□□□ -0.66
MSLN-207ENST00000566549 H3BPC8 53 aa10.92□□□□□ -0.66
MSLN-207ENST00000566549 MRPL34Q9BQ48 92 aaKnown RBP10.91□□□□□ -0.66
MSLN-207ENST00000566549 TP53AIP1Q9HCN2 124 aa10.89□□□□□ -0.67
MSLN-207ENST00000566549 CD164Q04900 197 aa10.88□□□□□ -0.67
MSLN-207ENST00000566549 CYP4F30PQ9H0H9 118 aa10.87□□□□□ -0.67
MSLN-207ENST00000566549 PCOTHQ58A44 107 aa10.87□□□□□ -0.67
MSLN-207ENST00000566549 LINC00336Q6ZUF6 198 aa10.86□□□□□ -0.67
MSLN-207ENST00000566549 KRTAP1-4P0C5Y4 121 aa10.84□□□□□ -0.67
MSLN-207ENST00000566549 SPANXA2-OT1Q8N9U9 137 aa10.8□□□□□ -0.68
MSLN-207ENST00000566549 PLA2G1BP04054 148 aaKnown RBP10.78□□□□□ -0.68
MSLN-207ENST00000566549 C1orf195Q5TG92 126 aa10.78□□□□□ -0.68
MSLN-207ENST00000566549 DYNC1H1Q14204 4646 aaKnown RBP10.77□□□□□ -0.69
MSLN-207ENST00000566549 Q5W150 140 aa10.76□□□□□ -0.69
MSLN-207ENST00000566549 SMR3BP02814 79 aaPredicted RBP10.74□□□□□ -0.69
MSLN-207ENST00000566549 PRO0628Q9UI54 55 aa10.73□□□□□ -0.69
MSLN-207ENST00000566549 IGLV7-46A0A075B6I9 117 aa10.72□□□□□ -0.69
MSLN-207ENST00000566549 LINC00313P59037 77 aa10.72□□□□□ -0.69
MSLN-207ENST00000566549 TYMSOSQ8TAI1 123 aa10.72□□□□□ -0.69
MSLN-207ENST00000566549 C8orf87E5RJ46 101 aa10.71□□□□□ -0.69
MSLN-207ENST00000566549 V9GYY9 64 aa10.71□□□□□ -0.69
MSLN-207ENST00000566549 RETNLBQ9BQ08 111 aa10.7□□□□□ -0.7
MSLN-207ENST00000566549 LIMD2Q9BT23 127 aa10.67□□□□□ -0.7
MSLN-207ENST00000566549 FAT1Q14517 4588 aa10.66□□□□□ -0.7
MSLN-207ENST00000566549 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
MSLN-207ENST00000566549 PSPHP1O15172 72 aa10.65□□□□□ -0.7
MSLN-207ENST00000566549 Q1T7F1 81 aa10.65□□□□□ -0.7
MSLN-207ENST00000566549 COA5Q86WW8 74 aa10.65□□□□□ -0.7
MSLN-207ENST00000566549 PRR26Q8N8Z3 221 aa10.65□□□□□ -0.7
MSLN-207ENST00000566549 BRK1Q8WUW1 75 aa10.65□□□□□ -0.7
MSLN-207ENST00000566549 RYR2Q92736 4967 aa10.64□□□□□ -0.71
MSLN-207ENST00000566549 LOC101927531A0A1B0GV80 90 aa10.63□□□□□ -0.71
MSLN-207ENST00000566549 KMT2CQ8NEZ4 4911 aaKnown RBP10.63□□□□□ -0.71
MSLN-207ENST00000566549 Q8N9P0 234 aaPredicted RBP10.62□□□□□ -0.71
MSLN-207ENST00000566549 APOBP04114 4563 aaKnown RBP10.6□□□□□ -0.71
MSLN-207ENST00000566549 A0A1B0GVY2 172 aa10.59□□□□□ -0.71
MSLN-207ENST00000566549 SPINK1P00995 79 aa10.58□□□□□ -0.72
MSLN-207ENST00000566549 KRTAP16-1A8MUX0 517 aa10.57□□□□□ -0.72
MSLN-207ENST00000566549 FAM229AH3BQW9 127 aa10.55□□□□□ -0.72
MSLN-207ENST00000566549 LINC00304Q8N9R0 145 aa10.55□□□□□ -0.72
MSLN-207ENST00000566549 A8MUN3 132 aa10.55□□□□□ -0.72
MSLN-207ENST00000566549 HRES1P13985 223 aa10.53□□□□□ -0.72
MSLN-207ENST00000566549 KRTAP10-4P60372 401 aaPredicted RBP10.46□□□□□ -0.73
MSLN-207ENST00000566549 PRR15LQ9BU68 103 aa10.46□□□□□ -0.73
MSLN-207ENST00000566549 SPAG11AQ6PDA7 123 aa10.46□□□□□ -0.74
MSLN-207ENST00000566549 IGKV2D-30A0A075B6S6 120 aa10.45□□□□□ -0.74
MSLN-207ENST00000566549 IGKV2-30P06310 120 aa10.45□□□□□ -0.74
MSLN-207ENST00000566549 Q5VV11 94 aa10.44□□□□□ -0.74
MSLN-207ENST00000566549 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
MSLN-207ENST00000566549 RPS29P62273 56 aaKnown RBP10.38□□□□□ -0.75
MSLN-207ENST00000566549 C9orf92A6NGG3 77 aa10.37□□□□□ -0.75
MSLN-207ENST00000566549 CHKB-CPT1BH3BT56 60 aa10.37□□□□□ -0.75
MSLN-207ENST00000566549 ACYP2P14621 99 aa10.36□□□□□ -0.75
MSLN-207ENST00000566549 DMAC1Q96GE9 116 aa10.35□□□□□ -0.75
MSLN-207ENST00000566549 A8MU10 97 aa10.32□□□□□ -0.76
MSLN-207ENST00000566549 RYR3Q15413 4870 aa10.32□□□□□ -0.76
MSLN-207ENST00000566549 H3BS24 57 aa10.3□□□□□ -0.76
MSLN-207ENST00000566549 LINC01558Q9Y6Z2 57 aa10.3□□□□□ -0.76
MSLN-207ENST00000566549 LRP1Q07954 4544 aaKnown RBP10.27□□□□□ -0.77
MSLN-207ENST00000566549 Q75L30 129 aa10.26□□□□□ -0.77
MSLN-207ENST00000566549 A6NED7 52 aa10.24□□□□□ -0.77
MSLN-207ENST00000566549 C7orf65Q6ZTY9 151 aa10.24□□□□□ -0.77
MSLN-207ENST00000566549 HSPG2P98160 4391 aa10.21□□□□□ -0.78
MSLN-207ENST00000566549 Q8N1X5 172 aa10.18□□□□□ -0.78
MSLN-207ENST00000566549 Q5VSD8 79 aa10.16□□□□□ -0.78
MSLN-207ENST00000566549 C20orf166-AS1Q96NR2 134 aa10.16□□□□□ -0.78
MSLN-207ENST00000566549 TNXBP22105 4242 aa10.15□□□□□ -0.78
MSLN-207ENST00000566549 A8MUU9 505 aa10.15□□□□□ -0.78
MSLN-207ENST00000566549 LCA10Q71F78 164 aa10.15□□□□□ -0.78
MSLN-207ENST00000566549 FLG2Q5D862 2391 aaPredicted RBP10.15□□□□□ -0.78
MSLN-207ENST00000566549 RYR1P21817 5038 aa10.14□□□□□ -0.79
MSLN-207ENST00000566549 SPINK7P58062 85 aa10.14□□□□□ -0.79
MSLN-207ENST00000566549 FAT3Q8TDW7 4589 aa10.13□□□□□ -0.79
MSLN-207ENST00000566549 SPTSSBQ8NFR3 76 aa10.08□□□□□ -0.8
MSLN-207ENST00000566549 KIAA1109Q2LD37 5005 aa10.08□□□□□ -0.8
MSLN-207ENST00000566549 PMAIP1Q13794 54 aa10.06□□□□□ -0.8
MSLN-207ENST00000566549 KRTAP17-1Q9BYP8 105 aa10.06□□□□□ -0.8
MSLN-207ENST00000566549 A0A1B0GU69 56 aa10.05□□□□□ -0.8
MSLN-207ENST00000566549 KRTAP10-8P60410 259 aa10.04□□□□□ -0.8
MSLN-207ENST00000566549 CDC42SE1Q9NRR8 79 aa10.04□□□□□ -0.8
MSLN-207ENST00000566549 MYCBP2O75592 4640 aa10.02□□□□□ -0.81
MSLN-207ENST00000566549 DMBT1Q9UGM3 2413 aaPredicted RBP10□□□□□ -0.81
MSLN-207ENST00000566549 ATP11AUNQ6ZP68 121 aa9.98□□□□□ -0.81
MSLN-207ENST00000566549 EPPK1P58107 5090 aaKnown RBP9.97□□□□□ -0.81
MSLN-207ENST00000566549 KRTAP3-1Q9BYR8 98 aa9.94□□□□□ -0.82
MSLN-207ENST00000566549 A0A0A0MQY5 61 aa9.91□□□□□ -0.82
MSLN-207ENST00000566549 A6NN06 94 aa9.87□□□□□ -0.83
MSLN-207ENST00000566549 KTN1-AS1Q86SY8 53 aa9.82□□□□□ -0.84
MSLN-207ENST00000566549 MT1HL1P0DM35 61 aa9.82□□□□□ -0.84
MSLN-207ENST00000566549 XP32Q5T750 250 aa9.82□□□□□ -0.84
MSLN-207ENST00000566549 UQCR11O14957 56 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms